BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003c05 (885 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001071146.1| Oryza sativa (japonica cultivar-group) Os10g... 430 e-117 dbj|AK121515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-114 gb|AF193345.1|AF193345 Oryza sativa H2A protein mRNA, complete cds 398 e-107 ref|NM_001055584.1| Oryza sativa (japonica cultivar-group) Os03g... 371 3e-99 dbj|AK121533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 3e-99 >ref|NM_001071146.1| Oryza sativa (japonica cultivar-group) Os10g0418000 (Os10g0418000) mRNA, complete cds Length = 930 Score = 430 bits (217), Expect = e-117 Identities = 372/424 (87%), Gaps = 6/424 (1%) Strand = Plus / Plus Query: 187 atggcggggaagggagggaaggggctgcttgcggcgaagacgacggcggccaaggccgcc 246 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 207 atggcggggaagggagggaaggggctgctcgcggcgaagacgacggcggcgaaggccgcc 266 Query: 247 gtcgacaaggacaaggacaaggacaagaagaaggcgccggtgtcccgctcctcgcgcgcc 306 | ||||| ||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 267 gccgaca------aggacaaggaccgcaagaaggcgcccgtctcccgctcctcccgcgcc 320 Query: 307 gggatccagttcccagtgggccgtatccacaggcagctcaagtcgagggtctccgcgaat 366 |||||||||||||| ||||| ||||||||||||||||| ||| |||||| || ||||| Sbjct: 321 gggatccagttcccggtggggcgtatccacaggcagctgaaggggagggtgtcggcgaac 380 Query: 367 ggccgtgtcggcgccactgctgcggtgtactctgcggcaatccttgagtacctgactgct 426 ||||| || || || || || ||||||||| | ||||| ||||| ||||||||||| || Sbjct: 381 ggccgcgtgggggcgacggcggcggtgtacacggcggcgatcctcgagtacctgacggcg 440 Query: 427 gaggtcctggagctggccggcaacgcaagcaaggatctcaaggtgaagcgtatcactccg 486 |||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 441 gaggtcctggagctcgccggcaacgccagcaaggacctcaaggtgaagcgcatcaccccg 500 Query: 487 cgccaccttcagcttgcgatccgtggtgacgaggagcttgacaccctcatcaagggcacc 546 |||||||| ||||| || ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 501 cgccacctgcagctcgccatccgcggggacgaggagctcgacaccctcatcaagggcacc 560 Query: 547 atcgctggcggcggtgtcattcctcacatccacaagtccctcatcaacaagacctccaag 606 || || |||||||| ||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 561 atagccggcggcggcgtcatcccgcacatccacaagtccctcatcaacaagaccgccaag 620 Query: 607 gagt 610 |||| Sbjct: 621 gagt 624 >dbj|AK121515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025E19, full insert sequence Length = 804 Score = 422 bits (213), Expect = e-114 Identities = 371/424 (87%), Gaps = 6/424 (1%) Strand = Plus / Plus Query: 187 atggcggggaagggagggaaggggctgcttgcggcgaagacgacggcggccaaggccgcc 246 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 83 atggcggggaagggagggaaggggctgctcgcggcgaagacgacggcggcgaaggccgcc 142 Query: 247 gtcgacaaggacaaggacaaggacaagaagaaggcgccggtgtcccgctcctcgcgcgcc 306 | ||||| ||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 143 gccgaca------aggacaaggaccgcaagaaggcgcccgtctcccgctcctcccgcgcc 196 Query: 307 gggatccagttcccagtgggccgtatccacaggcagctcaagtcgagggtctccgcgaat 366 |||||||||||||| ||||| ||||||||||||||||| ||| |||||| || ||||| Sbjct: 197 gggatccagttcccggtggggcgtatccacaggcagctgaaggggagggtgtcggcgaac 256 Query: 367 ggccgtgtcggcgccactgctgcggtgtactctgcggcaatccttgagtacctgactgct 426 ||||| || || || || || ||||||||| | ||||| ||||| ||||||||||| || Sbjct: 257 ggccgcgtgggggcgacggcggcggtgtacacggcggcgatcctcgagtacctgacggcg 316 Query: 427 gaggtcctggagctggccggcaacgcaagcaaggatctcaaggtgaagcgtatcactccg 486 |||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 317 gaggtcctggagctcgccggcaacgccagcaaggacctcaaggtgaagcgcatcaccccg 376 Query: 487 cgccaccttcagcttgcgatccgtggtgacgaggagcttgacaccctcatcaagggcacc 546 |||||||| ||||| || ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 377 cgccacctgcagctcgccatccgcggggacgaggagctcgacaccctaatcaagggcacc 436 Query: 547 atcgctggcggcggtgtcattcctcacatccacaagtccctcatcaacaagacctccaag 606 || || |||||||| ||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 437 atagccggcggcggcgtcatcccgcacatccacaagtccctcatcaacaagaccgccaag 496 Query: 607 gagt 610 |||| Sbjct: 497 gagt 500 >gb|AF193345.1|AF193345 Oryza sativa H2A protein mRNA, complete cds Length = 948 Score = 398 bits (201), Expect = e-107 Identities = 368/424 (86%), Gaps = 6/424 (1%) Strand = Plus / Plus Query: 187 atggcggggaagggagggaaggggctgcttgcggcgaagacgacggcggccaaggccgcc 246 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 207 atggcggggaagggagggaaggggctgctcgcggcgaagacgacggcggcgaaggccgcc 266 Query: 247 gtcgacaaggacaaggacaaggacaagaagaaggcgccggtgtcccgctcctcgcgcgcc 306 | ||||| ||||||||||| ||||||||||| | |||| |||||| |||||| Sbjct: 267 gccgaca------aggacaaggaccgcaagaaggcgcccctctccccctcctcccgcgcc 320 Query: 307 gggatccagttcccagtgggccgtatccacaggcagctcaagtcgagggtctccgcgaat 366 |||||||||||||| ||||| ||||||||||||||||| ||| |||||| || ||||| Sbjct: 321 gggatccagttcccggtggggcgtatccacaggcagctgaaggggagggtgtcggcgaac 380 Query: 367 ggccgtgtcggcgccactgctgcggtgtactctgcggcaatccttgagtacctgactgct 426 |||| || || || || || ||||||||| | ||||| ||||| ||||||||||| | Sbjct: 381 ggccccgtgggggcgacggcggcggtgtacacggcggcgatcctcgagtacctgacgggg 440 Query: 427 gaggtcctggagctggccggcaacgcaagcaaggatctcaaggtgaagcgtatcactccg 486 |||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 441 gaggtcctggagctcgccggcaacgccagcaaggacctcaaggtgaagcgcatcaccccg 500 Query: 487 cgccaccttcagcttgcgatccgtggtgacgaggagcttgacaccctcatcaagggcacc 546 |||||||| ||||| || ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 501 cgccacctgcagctcgccatccgcggggacgaggagctcgacaccctcatcaagggcacc 560 Query: 547 atcgctggcggcggtgtcattcctcacatccacaagtccctcatcaacaagacctccaag 606 || || |||||||| ||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 561 atagccggcggcggcgtcatcccgcacatccacaagtccctcatcaacaagaccgccaag 620 Query: 607 gagt 610 |||| Sbjct: 621 gagt 624 >ref|NM_001055584.1| Oryza sativa (japonica cultivar-group) Os03g0162200 (Os03g0162200) mRNA, complete cds Length = 813 Score = 371 bits (187), Expect = 3e-99 Identities = 366/427 (85%), Gaps = 9/427 (2%) Strand = Plus / Plus Query: 186 gatggcggggaagggagggaaggggctgcttgcggcgaagacgacggcggccaaggccgc 245 ||||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||| ||| Sbjct: 93 gatggcgggcaagggaggcaaggggctcctcgcggccaagaccacggcggcaaagagcgc 152 Query: 246 cgtcgacaaggacaaggacaaggacaagaagaaggcgccggtgtcccgctcctcgcgcgc 305 || ||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 153 cg---------acaaggacaaggacaagaagaaggcccccgtctcccgctcctcccgcgc 203 Query: 306 cgggatccagttcccagtgggccgtatccacaggcagctcaagtcgagggtctccgcgaa 365 ||| |||||||||| ||||| |||||||||||||||||||||||||||| || || | Sbjct: 204 cggcctccagttcccggtggggcgtatccacaggcagctcaagtcgagggcgtcggctca 263 Query: 366 tggccgtgtcggcgccactgctgcggtgtactctgcggcaatccttgagtacctgactgc 425 |||||| ||||||||||| || || |||||||| ||||| || || |||||||| || || Sbjct: 264 tggccgcgtcggcgccaccgccgccgtgtactccgcggcgattctcgagtacctaaccgc 323 Query: 426 tgaggtcctggagctggccggcaacgcaagcaaggatctcaaggtgaagcgtatcactcc 485 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 324 cgaggtcctggagctggccggcaacgcgagcaaggatctcaaggtgaagcgtatcacccc 383 Query: 486 gcgccaccttcagcttgcgatccgtggtgacgaggagcttgacaccctcatcaagggcac 545 |||||| || ||||| || ||||| || || |||||||| ||||| |||||||||||||| Sbjct: 384 gcgccatctccagctagccatccgcggggatgaggagctcgacacgctcatcaagggcac 443 Query: 546 catcgctggcggcggtgtcattcctcacatccacaagtccctcatcaacaagacctccaa 605 |||||| ||||| || ||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 444 catcgccggcggtggcgtcatcccccatatccacaagtcgctcatcaacaagacctccaa 503 Query: 606 ggagtga 612 |||||| Sbjct: 504 agagtga 510 >dbj|AK121533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P21, full insert sequence Length = 817 Score = 371 bits (187), Expect = 3e-99 Identities = 366/427 (85%), Gaps = 9/427 (2%) Strand = Plus / Plus Query: 186 gatggcggggaagggagggaaggggctgcttgcggcgaagacgacggcggccaaggccgc 245 ||||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||| ||| Sbjct: 95 gatggcgggcaagggaggcaaggggctcctcgcggccaagaccacggcggcaaagagcgc 154 Query: 246 cgtcgacaaggacaaggacaaggacaagaagaaggcgccggtgtcccgctcctcgcgcgc 305 || ||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 155 cg---------acaaggacaaggacaagaagaaggcccccgtctcccgctcctcccgcgc 205 Query: 306 cgggatccagttcccagtgggccgtatccacaggcagctcaagtcgagggtctccgcgaa 365 ||| |||||||||| ||||| |||||||||||||||||||||||||||| || || | Sbjct: 206 cggcctccagttcccggtggggcgtatccacaggcagctcaagtcgagggcgtcggctca 265 Query: 366 tggccgtgtcggcgccactgctgcggtgtactctgcggcaatccttgagtacctgactgc 425 |||||| ||||||||||| || || |||||||| ||||| || || |||||||| || || Sbjct: 266 tggccgcgtcggcgccaccgccgccgtgtactccgcggcgattctcgagtacctaaccgc 325 Query: 426 tgaggtcctggagctggccggcaacgcaagcaaggatctcaaggtgaagcgtatcactcc 485 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 326 cgaggtcctggagctggccggcaacgcgagcaaggatctcaaggtgaagcgtatcacccc 385 Query: 486 gcgccaccttcagcttgcgatccgtggtgacgaggagcttgacaccctcatcaagggcac 545 |||||| || ||||| || ||||| || || |||||||| ||||| |||||||||||||| Sbjct: 386 gcgccatctccagctagccatccgcggggatgaggagctcgacacgctcatcaagggcac 445 Query: 546 catcgctggcggcggtgtcattcctcacatccacaagtccctcatcaacaagacctccaa 605 |||||| ||||| || ||||| || || ||||||||||| |||||||||||||||||||| Sbjct: 446 catcgccggcggtggcgtcatcccccatatccacaagtcgctcatcaacaagacctccaa 505 Query: 606 ggagtga 612 |||||| Sbjct: 506 agagtga 512