BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003b21 (836 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241794.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 369 1e-98 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 280 9e-72 dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 280 9e-72 ref|NM_001070340.1| Oryza sativa (japonica cultivar-group) Os09g... 274 5e-70 gb|AY316293.1| Triticum aestivum SKP1/ASK1-like protein (skp1) m... 254 5e-64 >dbj|AK241794.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065208D18, full insert sequence Length = 857 Score = 369 bits (186), Expect = 1e-98 Identities = 240/258 (93%) Strand = Plus / Plus Query: 376 caaggccgccgaggaggagctcaagtccttcgactcggagttcgtcaaggtcgaccaggc 435 |||||||| |||||| ||||||||| | |||||| | ||||||||||||||||||||| | Sbjct: 346 caaggccgtcgaggacgagctcaagacgttcgacgccgagttcgtcaaggtcgaccagtc 405 Query: 436 caccctcttcgacctcatcttggctgcgaattacctgaacatcaagggactactggatct 495 |||||||||||| |||||| ||||||| || ||||| |||||||||||||| |||||||| Sbjct: 406 caccctcttcgatctcatcctggctgcaaactacctcaacatcaagggactgctggatct 465 Query: 496 gacctgccagaccgtcgctgacatgatcaaggggaagacacctgaggagatccgcaagac 555 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 466 gacctgccagaccgtggctgacatgatcaaggggaagacaccagaggagatccgcaagac 525 Query: 556 cttcaacatcaagaacgacttcacccccgaggaagaggaggaagtgaggagggagaacca 615 ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 526 cttcaacatcaagaatgacttcacccccgaggaagaagaggaggtgaggagggagaacca 585 Query: 616 gtgggccttcgaatgaag 633 |||||||||||||||||| Sbjct: 586 gtgggccttcgaatgaag 603 Score = 149 bits (75), Expect = 2e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 152 agctgcgacggcgaggagttcgaggtagaggagattgtggcgatggagtcgcagaccatc 211 |||||||| ||| ||| ||||||||| | |||| ||||| |||||||| ||||||||| Sbjct: 116 agctgcgagggccaggtgttcgaggtcgcggaggccgtggccatggagtcccagaccatc 175 Query: 212 aagcacatgatcgaggacgactgcgccgacagcggcatccccctccccaacgtctcctcc 271 ||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| || Sbjct: 176 cgccacatgatcgaggacaagtgcgccgacaccggcatcccgctccccaacgtctccgcc 235 Query: 272 cgcatcctctccagggtcatcgagtactgcaggaagcacgtccaggcgcgcggcg 326 |||||||||| ||| |||||||||||||| ||||||||| |||||||||||| Sbjct: 236 aagatcctctccaaggtaatcgagtactgcagcaagcacgtcgaggcgcgcggcg 290 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 280 bits (141), Expect = 9e-72 Identities = 168/177 (94%) Strand = Plus / Minus Query: 457 ggctgcgaattacctgaacatcaagggactactggatctgacctgccagaccgtcgctga 516 |||||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 20942242 ggctgcaaactacctcaacatcaagggactgctggatctgacctgccagaccgtggctga 20942183 Query: 517 catgatcaaggggaagacacctgaggagatccgcaagaccttcaacatcaagaacgactt 576 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 20942182 catgatcaaggggaagacaccagaggagatccgcaagaccttcaacatcaagaatgactt 20942123 Query: 577 cacccccgaggaagaggaggaagtgaggagggagaaccagtgggccttcgaatgaag 633 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 20942122 cacccccgaggaagaagaggaggtgaggagggagaaccagtgggccttcgaatgaag 20942066 Score = 149 bits (75), Expect = 2e-32 Identities = 150/175 (85%) Strand = Plus / Minus Query: 152 agctgcgacggcgaggagttcgaggtagaggagattgtggcgatggagtcgcagaccatc 211 |||||||| ||| ||| ||||||||| | |||| ||||| |||||||| ||||||||| Sbjct: 20944320 agctgcgagggccaggtgttcgaggtcgcggaggccgtggccatggagtcccagaccatc 20944261 Query: 212 aagcacatgatcgaggacgactgcgccgacagcggcatccccctccccaacgtctcctcc 271 ||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| || Sbjct: 20944260 cgccacatgatcgaggacaagtgcgccgacaccggcatcccgctccccaacgtctccgcc 20944201 Query: 272 cgcatcctctccagggtcatcgagtactgcaggaagcacgtccaggcgcgcggcg 326 |||||||||| ||| |||||||||||||| ||||||||| |||||||||||| Sbjct: 20944200 aagatcctctccaaggtaatcgagtactgcagcaagcacgtcgaggcgcgcggcg 20944146 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 376 caaggccgccgaggaggagctcaagtccttcgactcggagttcgtcaaggtcgaccaggc 435 |||||||| |||||| ||||||||| | |||||| | ||||||||||||||||||||| | Sbjct: 20944090 caaggccgtcgaggacgagctcaagacgttcgacgccgagttcgtcaaggtcgaccagtc 20944031 Query: 436 caccctcttcgacctcatc 454 |||||||||||| |||||| Sbjct: 20944030 caccctcttcgatctcatc 20944012 >dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 280 bits (141), Expect = 9e-72 Identities = 168/177 (94%) Strand = Plus / Minus Query: 457 ggctgcgaattacctgaacatcaagggactactggatctgacctgccagaccgtcgctga 516 |||||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 34331 ggctgcaaactacctcaacatcaagggactgctggatctgacctgccagaccgtggctga 34272 Query: 517 catgatcaaggggaagacacctgaggagatccgcaagaccttcaacatcaagaacgactt 576 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 34271 catgatcaaggggaagacaccagaggagatccgcaagaccttcaacatcaagaatgactt 34212 Query: 577 cacccccgaggaagaggaggaagtgaggagggagaaccagtgggccttcgaatgaag 633 ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 34211 cacccccgaggaagaagaggaggtgaggagggagaaccagtgggccttcgaatgaag 34155 Score = 149 bits (75), Expect = 2e-32 Identities = 150/175 (85%) Strand = Plus / Minus Query: 152 agctgcgacggcgaggagttcgaggtagaggagattgtggcgatggagtcgcagaccatc 211 |||||||| ||| ||| ||||||||| | |||| ||||| |||||||| ||||||||| Sbjct: 36409 agctgcgagggccaggtgttcgaggtcgcggaggccgtggccatggagtcccagaccatc 36350 Query: 212 aagcacatgatcgaggacgactgcgccgacagcggcatccccctccccaacgtctcctcc 271 ||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| || Sbjct: 36349 cgccacatgatcgaggacaagtgcgccgacaccggcatcccgctccccaacgtctccgcc 36290 Query: 272 cgcatcctctccagggtcatcgagtactgcaggaagcacgtccaggcgcgcggcg 326 |||||||||| ||| |||||||||||||| ||||||||| |||||||||||| Sbjct: 36289 aagatcctctccaaggtaatcgagtactgcagcaagcacgtcgaggcgcgcggcg 36235 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 376 caaggccgccgaggaggagctcaagtccttcgactcggagttcgtcaaggtcgaccaggc 435 |||||||| |||||| ||||||||| | |||||| | ||||||||||||||||||||| | Sbjct: 36179 caaggccgtcgaggacgagctcaagacgttcgacgccgagttcgtcaaggtcgaccagtc 36120 Query: 436 caccctcttcgacctcatc 454 |||||||||||| |||||| Sbjct: 36119 caccctcttcgatctcatc 36101 >ref|NM_001070340.1| Oryza sativa (japonica cultivar-group) Os09g0539500 (Os09g0539500) mRNA, complete cds Length = 618 Score = 274 bits (138), Expect = 5e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 458 gctgcgaattacctgaacatcaagggactactggatctgacctgccagaccgtcgctgac 517 ||||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 445 gctgcaaactacctcaacatcaagggactgctggatctgacctgccagaccgtggctgac 504 Query: 518 atgatcaaggggaagacacctgaggagatccgcaagaccttcaacatcaagaacgacttc 577 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 505 atgatcaaggggaagacaccagaggagatccgcaagaccttcaacatcaagaatgacttc 564 Query: 578 acccccgaggaagaggaggaagtgaggagggagaaccagtgggccttcgaatga 631 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 565 acccccgaggaagaagaggaggtgaggagggagaaccagtgggccttcgaatga 618 Score = 149 bits (75), Expect = 2e-32 Identities = 150/175 (85%) Strand = Plus / Plus Query: 152 agctgcgacggcgaggagttcgaggtagaggagattgtggcgatggagtcgcagaccatc 211 |||||||| ||| ||| ||||||||| | |||| ||||| |||||||| ||||||||| Sbjct: 43 agctgcgagggccaggtgttcgaggtcgcggaggccgtggccatggagtcccagaccatc 102 Query: 212 aagcacatgatcgaggacgactgcgccgacagcggcatccccctccccaacgtctcctcc 271 ||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| || Sbjct: 103 cgccacatgatcgaggacaagtgcgccgacaccggcatcccgctccccaacgtctccgcc 162 Query: 272 cgcatcctctccagggtcatcgagtactgcaggaagcacgtccaggcgcgcggcg 326 |||||||||| ||| |||||||||||||| ||||||||| |||||||||||| Sbjct: 163 aagatcctctccaaggtaatcgagtactgcagcaagcacgtcgaggcgcgcggcg 217 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 376 caaggccgccgaggaggagctcaagtccttcgactcggagttcgtcaaggtcgaccaggc 435 |||||||| |||||| ||||||||| | |||||| | ||||||||||||||||||||| | Sbjct: 273 caaggccgtcgaggacgagctcaagacgttcgacgccgagttcgtcaaggtcgaccagtc 332 Query: 436 caccctcttcgacctcatc 454 |||||||||||| |||||| Sbjct: 333 caccctcttcgatctcatc 351 >gb|AY316293.1| Triticum aestivum SKP1/ASK1-like protein (skp1) mRNA, complete cds Length = 822 Score = 254 bits (128), Expect = 5e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 413 gagttcgtcaaggtcgaccaggccaccctcttcgacctcatcttggctgcgaattacctg 472 |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 371 gagttcgtcaaggtcgaccaggccaccctcttcgacctcatcctggctgccaactacctg 430 Query: 473 aacatcaagggactactggatctgacctgccagaccgtcgctgacatgatcaaggggaag 532 ||||||||||| || | ||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 431 aacatcaaggggctgccggacctgacctgccagactgttgctgacatgatcaagggcaag 490 Query: 533 acacctgaggagatccgcaagaccttcaacatcaagaacgacttcacccccgaggaagag 592 || || ||||||||||||||||| |||||||||||||||||||| || |||||||| ||| Sbjct: 491 accccagaggagatccgcaagactttcaacatcaagaacgactttacgcccgaggaggag 550 Query: 593 gaggaagtgaggagggagaaccagtgggcctt 624 ||||| | | |||||||||||||||||||| Sbjct: 551 gaggagatccgcagggagaaccagtgggcctt 582 Score = 168 bits (85), Expect = 2e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 158 gacggcgaggagttcgaggtagaggagattgtggcgatggagtcgcagaccatcaagcac 217 |||||||||||||||||||| |||||| ||||| |||||||||||||| ||| ||| Sbjct: 116 gacggcgaggagttcgaggtggaggaggcggtggccatggagtcgcagacgatccgccac 175 Query: 218 atgatcgaggacgactgcgccgacagcggcatccccctccccaacgtctcctcccgcatc 277 ||||||||||||||||||||||||| ||||||||| |||||||||||| |||| ||| Sbjct: 176 atgatcgaggacgactgcgccgacaacggcatcccgctccccaacgtcaactccaagatc 235 Query: 278 ctctccagggtcatcgagtactgcaggaagcacgtccaggc 318 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 236 ctctccaaggtcatcgagtactgcaacaagcacgtccaggc 276