BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002m07 (1144 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241242.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 349 2e-92 ref|NM_001055499.1| Oryza sativa (japonica cultivar-group) Os03g... 234 6e-58 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon... 202 2e-48 gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome... 202 2e-48 >dbj|AK241242.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065128L13, full insert sequence Length = 975 Score = 349 bits (176), Expect = 2e-92 Identities = 290/328 (88%) Strand = Plus / Plus Query: 530 tagcagaaaggggttgccttgaaaagtacaagttctcccatggtgatgtggtcttattca 589 |||| |||||| | ||||| |||||||| ||||||||||||||||||| || || |||| Sbjct: 448 tagccgaaaggagctgcctccaaaagtaccagttctcccatggtgatgttgttttgttca 507 Query: 590 agtgccctagtaatcataaggagttgtttgtgaagagattgattgccctacctggtgagt 649 ||||||| ||| |||||| |||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 508 agtgccccagtgatcatagggagttgtttgtcaagagattaattgccctgcctggggagt 567 Query: 650 ggatgcagctccctgggtccccggagataattaagatcccagaggggcattgctgggttg 709 |||||||||||||||| |||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 568 ggatgcagctccctggcacccctgatataattaagatcccagaagggcactgctgggttg 627 Query: 710 aaggtgataatgctgcccgtagttgggattctaggtcatttggcccaatccctttaggtc 769 ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 628 aaggtgataatgctgcctgcagctgggattctaggtcatttggcccaatccctttaggtc 687 Query: 770 tagttaaagggagggtgacttccatcatctggccaccgtcaaagattagccgagtggatc 829 || |||||||||||||| | | ||||||||||||||||||||||| | ||||| ||| Sbjct: 688 taattaaagggagggtggcccacgtcatctggccaccgtcaaagattggacgagttgata 747 Query: 830 gaaaaatgcctgaagatcgaatttcacc 857 ||||||||||||| || |||||||||| Sbjct: 748 caaaaatgcctgaaaatagaatttcacc 775 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 298 tttaatcggtgtcaccatttctgatcggtatgtaaccgtagtatcggtgacgggcgattc 357 |||| ||||| |||||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 321 tttagtcggtttcaccatttccgatcgatatgcaaccgtagtatcagtgacgggcgattc 380 Query: 358 gatgcgtcctacgtttacagcg 379 ||||| ||| |||||||||||| Sbjct: 381 gatgcatcccacgtttacagcg 402 >ref|NM_001055499.1| Oryza sativa (japonica cultivar-group) Os03g0147900 (Os03g0147900) mRNA, complete cds Length = 213 Score = 234 bits (118), Expect = 6e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 652 atgcagctccctgggtccccggagataattaagatcccagaggggcattgctgggttgaa 711 |||||||||||||| |||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 1 atgcagctccctggcacccctgatataattaagatcccagaagggcactgctgggttgaa 60 Query: 712 ggtgataatgctgcccgtagttgggattctaggtcatttggcccaatccctttaggtcta 771 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtgataatgctgcctgcagctgggattctaggtcatttggcccaatccctttaggtcta 120 Query: 772 gttaaagggagggtgacttccatcatctggccaccgtcaaagattagccgagtggatcga 831 |||||||||||||| | | ||||||||||||||||||||||| | ||||| ||| | Sbjct: 121 attaaagggagggtggcccacgtcatctggccaccgtcaaagattggacgagttgataca 180 Query: 832 aaaatgcctgaagatcgaatttcacc 857 |||||||||||| || |||||||||| Sbjct: 181 aaaatgcctgaaaatagaatttcacc 206 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 591 gtgccctagtaatcataaggagttgtttgtgaagagattgattgccctacctggtgagtg 650 |||||| ||| |||||| |||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 2664930 gtgccccagtgatcatagggagttgtttgtcaagagattaattgccctgcctggggagtg 2664989 Query: 651 gatgcagctccctgggtccccggagataattaagatcccagaggggcattgctgggttga 710 ||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 2664990 gatgcagctccctggcacccctgatataattaagatcccagaagggcactgctgggttga 2665049 Query: 711 aggtgataatgctgcccgtagttgggattctaggtcatttggccca 756 |||||||||||||||| | || |||||||||||||||||||||||| Sbjct: 2665050 aggtgataatgctgcctgcagctgggattctaggtcatttggccca 2665095 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 298 tttaatcggtgtcaccatttctgatcggtatgtaaccgtagtatcggtgacgggcgattc 357 |||| ||||| |||||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 2664545 tttagtcggtttcaccatttccgatcgatatgcaaccgtagtatcagtgacgggcgattc 2664604 Query: 358 gatgcgtcctacgtttacagcg 379 ||||| ||| |||||||||||| Sbjct: 2664605 gatgcatcccacgtttacagcg 2664626 Score = 99.6 bits (50), Expect = 2e-17 Identities = 141/170 (82%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 424 tcaacaaggcatggacagttggatgattctgcagtccatatccaaagattgttttttttg 483 ||||| |||||||||||||||||||| ||| |||| ||||| |||| ||| | || | | Sbjct: 2664673 tcaactaggcatggacagttggatgactctacagttcatattcaaatatt-tcttctgtc 2664731 Query: 484 ttctcatttgtgctgaccaggttgctcgaaccaggtgatttcgtgttagcagaaaggggt 543 |||| ||||||||||| ||||||| | |||| ||||| | | ||| |||| |||||| | Sbjct: 2664732 ttcttatttgtgctgatcaggttgttggaactaggtgctgtagtgctagccgaaaggagc 2664791 Query: 544 tgccttgaaaagtacaagttctcccatggtgatgtggtcttattcaagtg 593 ||||| |||||||| ||||||||||||||||||| || || |||||||| Sbjct: 2664792 tgcctccaaaagtaccagttctcccatggtgatgttgttttgttcaagtg 2664841 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 757 atccctttaggtctagttaaagggagggtgacttccatcatctggccaccgtcaaagatt 816 ||||||||||||||| |||||||||||||| | | ||||||||||||||||||||||| Sbjct: 2666931 atccctttaggtctaattaaagggagggtggcccacgtcatctggccaccgtcaaagatt 2666990 Query: 817 agccgagtggatcgaaaaatgcctgaagatcgaatttcacc 857 | ||||| ||| ||||||||||||| || |||||||||| Sbjct: 2666991 ggacgagttgatacaaaaatgcctgaaaatagaatttcacc 2667031 >gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Minus Query: 591 gtgccctagtaatcataaggagttgtttgtgaagagattgattgccctacctggtgagtg 650 |||||| ||| |||||| |||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 5274 gtgccccagtgatcatagggagttgtttgtcaagagattaattgccctgcctggggagtg 5215 Query: 651 gatgcagctccctgggtccccggagataattaagatcccagaggggcattgctgggttga 710 ||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 5214 gatgcagctccctggcacccctgatataattaagatcccagaagggcactgctgggttga 5155 Query: 711 aggtgataatgctgcccgtagttgggattctaggtcatttggccca 756 |||||||||||||||| | || |||||||||||||||||||||||| Sbjct: 5154 aggtgataatgctgcctgcagctgggattctaggtcatttggccca 5109 Score = 99.6 bits (50), Expect = 2e-17 Identities = 141/170 (82%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 424 tcaacaaggcatggacagttggatgattctgcagtccatatccaaagattgttttttttg 483 ||||| |||||||||||||||||||| ||| |||| ||||| |||| ||| | || | | Sbjct: 5531 tcaactaggcatggacagttggatgactctacagttcatattcaaatatt-tcttctgtc 5473 Query: 484 ttctcatttgtgctgaccaggttgctcgaaccaggtgatttcgtgttagcagaaaggggt 543 |||| ||||||||||| ||||||| | |||| ||||| | | ||| |||| |||||| | Sbjct: 5472 ttcttatttgtgctgatcaggttgttggaactaggtgctgtagtgctagccgaaaggagc 5413 Query: 544 tgccttgaaaagtacaagttctcccatggtgatgtggtcttattcaagtg 593 ||||| |||||||| ||||||||||||||||||| || || |||||||| Sbjct: 5412 tgcctccaaaagtaccagttctcccatggtgatgttgttttgttcaagtg 5363 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 298 tttaatcggtgtcaccatttctgatcggtatgtaaccgtagtatcggtgacgggcgattc 357 |||| ||||| |||||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 5659 tttagtcggtttcaccatttccgatcgatatgcaaccgtagtatcagtgacgggcgattc 5600 Query: 358 gatgcgtcctacgtttacagcg 379 ||||| ||| |||||||||||| Sbjct: 5599 gatgcatcccacgtttacagcg 5578 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Minus Query: 757 atccctttaggtctagttaaagggagggtgacttccatcatctggccaccgtcaaagatt 816 ||||||||||||||| |||||||||||||| | | ||||||||||||||||||||||| Sbjct: 3273 atccctttaggtctaattaaagggagggtggcccacgtcatctggccaccgtcaaagatt 3214 Query: 817 agccgagtggatcgaaaaatgcctgaagatcgaatttcacc 857 | ||||| ||| ||||||||||||| || |||||||||| Sbjct: 3213 ggacgagttgatacaaaaatgcctgaaaatagaatttcacc 3173 >gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 202 bits (102), Expect = 2e-48 Identities = 150/166 (90%) Strand = Plus / Plus Query: 591 gtgccctagtaatcataaggagttgtttgtgaagagattgattgccctacctggtgagtg 650 |||||| ||| |||||| |||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 9739 gtgccccagtgatcatagggagttgtttgtcaagagattaattgccctgcctggggagtg 9798 Query: 651 gatgcagctccctgggtccccggagataattaagatcccagaggggcattgctgggttga 710 ||||||||||||||| |||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 9799 gatgcagctccctggcacccctgatataattaagatcccagaagggcactgctgggttga 9858 Query: 711 aggtgataatgctgcccgtagttgggattctaggtcatttggccca 756 |||||||||||||||| | || |||||||||||||||||||||||| Sbjct: 9859 aggtgataatgctgcctgcagctgggattctaggtcatttggccca 9904 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 298 tttaatcggtgtcaccatttctgatcggtatgtaaccgtagtatcggtgacgggcgattc 357 |||| ||||| |||||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 9354 tttagtcggtttcaccatttccgatcgatatgcaaccgtagtatcagtgacgggcgattc 9413 Query: 358 gatgcgtcctacgtttacagcg 379 ||||| ||| |||||||||||| Sbjct: 9414 gatgcatcccacgtttacagcg 9435 Score = 99.6 bits (50), Expect = 2e-17 Identities = 141/170 (82%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 424 tcaacaaggcatggacagttggatgattctgcagtccatatccaaagattgttttttttg 483 ||||| |||||||||||||||||||| ||| |||| ||||| |||| ||| | || | | Sbjct: 9482 tcaactaggcatggacagttggatgactctacagttcatattcaaatatt-tcttctgtc 9540 Query: 484 ttctcatttgtgctgaccaggttgctcgaaccaggtgatttcgtgttagcagaaaggggt 543 |||| ||||||||||| ||||||| | |||| ||||| | | ||| |||| |||||| | Sbjct: 9541 ttcttatttgtgctgatcaggttgttggaactaggtgctgtagtgctagccgaaaggagc 9600 Query: 544 tgccttgaaaagtacaagttctcccatggtgatgtggtcttattcaagtg 593 ||||| |||||||| ||||||||||||||||||| || || |||||||| Sbjct: 9601 tgcctccaaaagtaccagttctcccatggtgatgttgttttgttcaagtg 9650 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Plus Query: 757 atccctttaggtctagttaaagggagggtgacttccatcatctggccaccgtcaaagatt 816 ||||||||||||||| |||||||||||||| | | ||||||||||||||||||||||| Sbjct: 11740 atccctttaggtctaattaaagggagggtggcccacgtcatctggccaccgtcaaagatt 11799 Query: 817 agccgagtggatcgaaaaatgcctgaagatcgaatttcacc 857 | ||||| ||| ||||||||||||| || |||||||||| Sbjct: 11800 ggacgagttgatacaaaaatgcctgaaaatagaatttcacc 11840