BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002m01 (922 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241971.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 280 1e-71 ref|NM_001074807.1| Oryza sativa (japonica cultivar-group) Os11g... 278 4e-71 gb|EF515855.1| Zea mays putative GRF-interacting factor 2 (GIF2)... 256 1e-64 gb|DQ246171.1| Zea mays clone 10805 mRNA sequence 232 2e-57 gb|DQ244734.1| Zea mays clone 10348 mRNA sequence 153 1e-33 >dbj|AK241971.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075095O13, full insert sequence Length = 954 Score = 280 bits (141), Expect = 1e-71 Identities = 227/254 (89%), Gaps = 5/254 (1%) Strand = Plus / Plus Query: 97 gatgcagcagccgatgcccatgccgcc----gccgccggccgcggcggtgcccgcggcgg 152 ||||||||||| |||| |||||||| | |||||| ||||| |||||||| |||||| Sbjct: 85 gatgcagcagcagatggccatgccggcgggggccgcc-gccgccgcggtgccgccggcgg 143 Query: 153 ccggcatcaccaccgagcagatccaaaagtatttggatgaaaataagcaacttattttgg 212 |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 144 ccggcatcaccaccgagcagatccaaaagtatttggatgaaaataaacagctaattttgg 203 Query: 213 ccatcctggaaaatcaaaacttagggaagttggctgaatgtgcacagtttcaagctcaac 272 |||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| | Sbjct: 204 ccatcctggaaaatcaaaacctagggaagttggctgaatgtgctcagtaccaagctcagc 263 Query: 273 tccaaaagaatctcttgtatctggctgctatcgcggatgcccaaccaccacagaaccctg 332 | |||||||||||||||||||||||||| || || |||||||||||||| ||||| || | Sbjct: 264 ttcaaaagaatctcttgtatctggctgccattgcagatgcccaaccacctcagaatccag 323 Query: 333 caagtcgccctcag 346 ||||||||||||| Sbjct: 324 gaagtcgccctcag 337 Score = 141 bits (71), Expect = 6e-30 Identities = 142/167 (85%), Gaps = 9/167 (5%) Strand = Plus / Plus Query: 350 ggtgcagggcattatatgtcgcaagtaccaatgttccctccaagaacccctttaacccca 409 ||||| |||||||| ||||| |||||||| ||||||||||||||||| || ||||||||| Sbjct: 362 ggtgctgggcattacatgtcccaagtaccgatgttccctccaagaactcccttaacccca 421 Query: 410 caacagatgcaagagcagcag---------cttcagcagcagcaagctcaggttcttcct 460 ||||||||||||||||||||| || ||||| ||||||||||||| ||| | Sbjct: 422 caacagatgcaagagcagcagcagcagcaactccagcaacagcaagctcaggctctagcc 481 Query: 461 ttccccggccagatgatcatgagaccaggtgctgtcaacggcatgca 507 ||||||||||||||| | |||||||||||| ||||||| |||||||| Sbjct: 482 ttccccggccagatgctaatgagaccaggtactgtcaatggcatgca 528 Score = 81.8 bits (41), Expect = 5e-12 Identities = 98/115 (85%), Gaps = 9/115 (7%) Strand = Plus / Plus Query: 797 ttagaaggctcatcttatcggtcttgtagaacaaaa--tttagat---tgatgatgtaat 851 ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||| Sbjct: 814 ttagaaggctcgtcttatcggtgttgtagaacaaaacttttagattgatgatgatgtaac 873 Query: 852 ctgtcacagattgttatctcattctaca----ttgtagccattatggaataattt 902 || ||| ||||| ||||||||| ||||| ||||||| ||||||||||||||| Sbjct: 874 ctatcagagattcttatctcatcctacaattgttgtagctattatggaataattt 928 >ref|NM_001074807.1| Oryza sativa (japonica cultivar-group) Os11g0615200 (Os11g0615200) mRNA, complete cds Length = 618 Score = 278 bits (140), Expect = 4e-71 Identities = 197/216 (91%) Strand = Plus / Plus Query: 131 gccgcggcggtgcccgcggcggccggcatcaccaccgagcagatccaaaagtatttggat 190 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37 gccgccgcggtgccgccggcggccggcatcaccaccgagcagatccaaaagtatttggat 96 Query: 191 gaaaataagcaacttattttggccatcctggaaaatcaaaacttagggaagttggctgaa 250 |||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 97 gaaaataaacagctaattttggccatcctggaaaatcaaaacctagggaagttggctgaa 156 Query: 251 tgtgcacagtttcaagctcaactccaaaagaatctcttgtatctggctgctatcgcggat 310 ||||| |||| |||||||| || |||||||||||||||||||||||||| || || ||| Sbjct: 157 tgtgctcagtaccaagctcagcttcaaaagaatctcttgtatctggctgccattgcagat 216 Query: 311 gcccaaccaccacagaaccctgcaagtcgccctcag 346 ||||||||||| ||||| || | ||||||||||||| Sbjct: 217 gcccaaccacctcagaatccaggaagtcgccctcag 252 Score = 141 bits (71), Expect = 6e-30 Identities = 142/167 (85%), Gaps = 9/167 (5%) Strand = Plus / Plus Query: 350 ggtgcagggcattatatgtcgcaagtaccaatgttccctccaagaacccctttaacccca 409 ||||| |||||||| ||||| |||||||| ||||||||||||||||| || ||||||||| Sbjct: 277 ggtgctgggcattacatgtcccaagtaccgatgttccctccaagaactcccttaacccca 336 Query: 410 caacagatgcaagagcagcag---------cttcagcagcagcaagctcaggttcttcct 460 ||||||||||||||||||||| || ||||| ||||||||||||| ||| | Sbjct: 337 caacagatgcaagagcagcagcagcagcaactccagcaacagcaagctcaggctctagcc 396 Query: 461 ttccccggccagatgatcatgagaccaggtgctgtcaacggcatgca 507 ||||||||||||||| | |||||||||||| ||||||| |||||||| Sbjct: 397 ttccccggccagatgctaatgagaccaggtactgtcaatggcatgca 443 >gb|EF515855.1| Zea mays putative GRF-interacting factor 2 (GIF2) mRNA, complete cds Length = 872 Score = 256 bits (129), Expect = 1e-64 Identities = 171/185 (92%) Strand = Plus / Plus Query: 134 gcggcggtgcccgcggcggccggcatcaccaccgagcagatccaaaagtatttggatgaa 193 ||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 98 gcggcggcgcccccggcggccggcatcactaccgagcagatccagaagtatttggacgaa 157 Query: 194 aataagcaacttattttggccatcctggaaaatcaaaacttagggaagttggctgaatgt 253 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 158 aataagcaacttattttggccatcctggaaaatcagaacttagggaagttggctgaatgt 217 Query: 254 gcacagtttcaagctcaactccaaaagaatctcttgtatctggctgctatcgcggatgcc 313 || |||| |||||||||||| |||||||| |||||||| |||||||| || || |||||| Sbjct: 218 gctcagtatcaagctcaacttcaaaagaacctcttgtacctggctgcgattgctgatgcc 277 Query: 314 caacc 318 ||||| Sbjct: 278 caacc 282 Score = 123 bits (62), Expect = 1e-24 Identities = 80/86 (93%) Strand = Plus / Plus Query: 346 gcctggtgcagggcattatatgtcgcaagtaccaatgttccctccaagaacccctttaac 405 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 337 gcctggtgcggggcattacatgtcacaagtaccaatgttccctccaagaaccccattaac 396 Query: 406 cccacaacagatgcaagagcagcagc 431 |||||| |||||||| |||||||||| Sbjct: 397 cccacagcagatgcaggagcagcagc 422 >gb|DQ246171.1| Zea mays clone 10805 mRNA sequence Length = 990 Score = 232 bits (117), Expect = 2e-57 Identities = 168/185 (90%) Strand = Plus / Plus Query: 134 gcggcggtgcccgcggcggccggcatcaccaccgagcagatccaaaagtatttggatgaa 193 ||||||| |||| ||||||| |||||||| |||||||||||||| ||||||||||| ||| Sbjct: 130 gcggcggcgcccccggcggcaggcatcactaccgagcagatccagaagtatttggacgaa 189 Query: 194 aataagcaacttattttggccatcctggaaaatcaaaacttagggaagttggctgaatgt 253 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 190 aataagcaacttattttggccatcctggaaaatcagaacttacggaagttggctgaatgt 249 Query: 254 gcacagtttcaagctcaactccaaaagaatctcttgtatctggctgctatcgcggatgcc 313 || |||| |||||||||||| ||||| || |||||||| |||||||| || || |||||| Sbjct: 250 gctcagtatcaagctcaacttcaaaaaaacctcttgtacctggctgcgattgctgatgcc 309 Query: 314 caacc 318 ||||| Sbjct: 310 caacc 314 >gb|DQ244734.1| Zea mays clone 10348 mRNA sequence Length = 1016 Score = 153 bits (77), Expect = 1e-33 Identities = 149/173 (86%) Strand = Plus / Plus Query: 147 cggcggccggcatcaccaccgagcagatccaaaagtatttggatgaaaataagcaactta 206 |||| ||||| |||||||| |||||||||||||||||| ||||||| |||||||| |||| Sbjct: 89 cggccgccggaatcaccacggagcagatccaaaagtatctggatgagaataagcagctta 148 Query: 207 ttttggccatcctggaaaatcaaaacttagggaagttggctgaatgtgcacagtttcaag 266 |||||||||| |||||||||| ||| |||| || ||||| |||||||| |||| ||| Sbjct: 149 ttttggccattttggaaaatcagaacctaggaaaattggcagaatgtgctcagtatcagt 208 Query: 267 ctcaactccaaaagaatctcttgtatctggctgctatcgcggatgcccaacca 319 | ||||| || ||||| ||||||||||| ||||| ||||| |||||||||||| Sbjct: 209 cacaacttcagaagaacctcttgtatctcgctgcaatcgcagatgcccaacca 261