BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002j10 (699 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|BT018950.1| Zea mays clone Contig110.F mRNA sequence 464 e-127 dbj|AB205017.1| Lolium multiflorum gene for replacement histone ... 424 e-115 ref|NM_001063228.1| Oryza sativa (japonica cultivar-group) Os06g... 416 e-113 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 416 e-113 emb|X79714.1|LTMRHIS3 L.temulentum mRNA for histone H3 416 e-113 >gb|BT018950.1| Zea mays clone Contig110.F mRNA sequence Length = 636 Score = 464 bits (234), Expect = e-127 Identities = 294/314 (93%) Strand = Plus / Minus Query: 139 cgaggaagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctggga 198 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 467 cgaggaagtcggcgccgacgaccggcggcgtgaagaagccccacaggtacaggcccggaa 408 Query: 199 cggtggcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagc 258 | ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 407 ccgtggcgctgcgcgagatccgcaagtaccagaagagcacggagctgctgatccgcaagc 348 Query: 259 tgccgttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttcc 318 |||| ||||||||||||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 347 tgcccttccagcgcctggtgcgcgagatcgcgcaggacttcaagacagacctccgattcc 288 Query: 319 agagccacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcg 378 |||||||||| |||||||||||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 287 agagccacgccgtgctggcgctccaggaggccgccgaggcctacctcgtcggtctcttcg 228 Query: 379 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatcc 438 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 227 aggacaccaacctctgcgccatccacgctaagcgcgtcaccatcatgcccaaggacatcc 168 Query: 439 agctcgcccgccgc 452 |||||||||||||| Sbjct: 167 agctcgcccgccgc 154 >dbj|AB205017.1| Lolium multiflorum gene for replacement histone H3, exon 1-2, complete cds Length = 784 Score = 424 bits (214), Expect = e-115 Identities = 289/314 (92%) Strand = Plus / Plus Query: 139 cgaggaagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctggga 198 ||||||||||||| ||||| ||||||||||||||||| |||||| | |||||||| || | Sbjct: 241 cgaggaagtcggccccgaccaccggcggcgtgaagaagccccaccgctacaggcccggaa 300 Query: 199 cggtggcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagc 258 | |||||||| || |||||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 301 ccgtggcgctccgcgagatccgcaagtaccagaagagcacggagctgctcatccgcaagc 360 Query: 259 tgccgttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttcc 318 | || |||||||||||||| | |||||||| |||||||||||||||||||| ||||||| Sbjct: 361 tccccttccagcgcctggtccgcgagatcgcgcaggacttcaagacggacctgcggttcc 420 Query: 319 agagccacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcg 378 |||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 421 agagccacgccgtgctggcgctccaggaggcggccgaggcctacctcgtcggcctcttcg 480 Query: 379 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatcc 438 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 481 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcccaaggacatcc 540 Query: 439 agctcgcccgccgc 452 |||||||||||||| Sbjct: 541 agctcgcccgccgc 554 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 90 atggcccgtacgaagcagaccgctcgcaagtccaccggcggcaaggccccgaggaag 146 ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 53 atggcccgtaccaagcagaccgcccgcaagtccaccggcggcaaggcccccaggaag 109 >ref|NM_001063228.1| Oryza sativa (japonica cultivar-group) Os06g0130900 (Os06g0130900) mRNA, complete cds Length = 765 Score = 416 bits (210), Expect = e-113 Identities = 288/314 (91%) Strand = Plus / Plus Query: 139 cgaggaagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctggga 198 |||||||||| || ||||| ||||||||||||||||| |||||| | |||||||| |||| Sbjct: 161 cgaggaagtctgctccgaccaccggcggcgtgaagaagccccaccgctacaggccgggga 220 Query: 199 cggtggcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagc 258 |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 221 cggtggcgctccgcgagatccgcaagtaccagaagagcacggagctcctgatccgcaagc 280 Query: 259 tgccgttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttcc 318 | || ||||||||||| || | |||||||| |||||||||||||| |||||||| |||| Sbjct: 281 tccccttccagcgcctcgtccgcgagatcgcgcaggacttcaagaccgacctccgcttcc 340 Query: 319 agagccacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcg 378 |||||||||||||||| || ||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 341 agagccacgcggtgctcgccctccaggaggccgccgaggcctacctcgtcggtctcttcg 400 Query: 379 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatcc 438 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 401 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcccaaggacatcc 460 Query: 439 agctcgcccgccgc 452 |||||||||||||| Sbjct: 461 agctcgcccgccgc 474 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 87 gagatggcccgtacgaagcagaccgctcgcaagtccaccggcggcaaggccccgaggaag 146 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 82 gagatggcccgtacgaagcagaccgcccgcaagtccaccggcggcaaggccccgaggaag 141 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 416 bits (210), Expect = e-113 Identities = 288/314 (91%) Strand = Plus / Minus Query: 139 cgaggaagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctggga 198 |||||||||| || ||||| ||||||||||||||||| |||||| | |||||||| |||| Sbjct: 1645030 cgaggaagtctgctccgaccaccggcggcgtgaagaagccccaccgctacaggccgggga 1644971 Query: 199 cggtggcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagc 258 |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1644970 cggtggcgctccgcgagatccgcaagtaccagaagagcacggagctcctgatccgcaagc 1644911 Query: 259 tgccgttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttcc 318 | || ||||||||||| || | |||||||| |||||||||||||| |||||||| |||| Sbjct: 1644910 tccccttccagcgcctcgtccgcgagatcgcgcaggacttcaagaccgacctccgcttcc 1644851 Query: 319 agagccacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcg 378 |||||||||||||||| || ||||||||||| || ||||||||||| ||||| ||||||| Sbjct: 1644850 agagccacgcggtgctcgccctccaggaggccgccgaggcctacctcgtcggtctcttcg 1644791 Query: 379 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatcc 438 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1644790 aggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcccaaggacatcc 1644731 Query: 439 agctcgcccgccgc 452 |||||||||||||| Sbjct: 1644730 agctcgcccgccgc 1644717 Score = 319 bits (161), Expect = 8e-84 Identities = 272/309 (88%) Strand = Plus / Minus Query: 144 aagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctgggacggtg 203 |||||||||||| | ||||||||||||||||| || ||| | | |||||| || || || Sbjct: 3054533 aagtcggcgccggccaccggcggcgtgaagaagccgcaccgcttcaggccgggcaccgtc 3054474 Query: 204 gcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagctgccg 263 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 3054473 gcgctccgtgagatccgcaagtaccagaagagcacggagctgctcatccgcaagctcccc 3054414 Query: 264 ttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttccagagc 323 ||||||||||| || | ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 3054413 ttccagcgcctcgtccgcgagatcgcccaggacttcaagaccgacctccgcttccagagc 3054354 Query: 324 cacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcgaggac 383 ||| || ||||| |||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 3054353 tccgccgtcgccgcgctgcaggaggccgcggaggcgtacctcgtcgggctcttcgaggac 3054294 Query: 384 accaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatccagctc 443 || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3054293 actaacctgtgcgccatccacgccaagcgcgtcaccatcatgcccaaggacatccagctc 3054234 Query: 444 gcccgccgc 452 ||||||||| Sbjct: 3054233 gcccgccgc 3054225 Score = 301 bits (152), Expect = 2e-78 Identities = 269/308 (87%) Strand = Plus / Plus Query: 144 aagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctgggacggtg 203 |||||||||||| | ||||||||||||||||| || ||| | | |||||| || || || Sbjct: 3055244 aagtcggcgccggccaccggcggcgtgaagaagccgcaccgcttcaggccgggcaccgtc 3055303 Query: 204 gcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagctgccg 263 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 3055304 gcgctccgtgagatccgcaagtaccagaagagcacggagctgctcatccgcaagctcccc 3055363 Query: 264 ttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttccagagc 323 ||||||||||| || | ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 3055364 ttccagcgcctcgtccgcgagatcgcccaggacttcaagaccgacctccgcttccagagc 3055423 Query: 324 cacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcgaggac 383 ||| || || || |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 3055424 tccgccgtcgccgccctgcaggaggccgcggaggcgtacctcgtcgggctgttcgaggac 3055483 Query: 384 accaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatccagctc 443 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3055484 accaacctgtgcgccatccacgccaagcgcgtcaccatcatgcccaaggacatccagctc 3055543 Query: 444 gcccgccg 451 || ||||| Sbjct: 3055544 gcgcgccg 3055551 Score = 293 bits (148), Expect = 5e-76 Identities = 268/308 (87%) Strand = Plus / Minus Query: 144 aagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacaggcctgggacggtg 203 |||||||| ||| | ||||||||||||||||| |||||| | | |||||| || || || Sbjct: 3039856 aagtcggccccggccaccggcggcgtgaagaagccccaccgcttcaggcccggcaccgtc 3039797 Query: 204 gcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgatccgcaagctgccg 263 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 3039796 gcgctccgtgagatccgcaagtaccagaagagcacggagctgctcatccgcaagctcccc 3039737 Query: 264 ttccagcgcctggtgagggagatcgcccaggacttcaagacggacctccggttccagagc 323 ||||||||||| || | ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 3039736 ttccagcgcctcgtccgcgagatcgcccaggacttcaagaccgacctccgcttccagagc 3039677 Query: 324 cacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgggctcttcgaggac 383 ||| || ||||| |||||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 3039676 tccgccgtcgccgcgctgcaggaggccgccgaggcgtacctcgtcgggctgttcgaggac 3039617 Query: 384 accaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaaggacatccagctc 443 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3039616 accaacctgtgtgccatccacgccaagcgcgtcaccatcatgcccaaggacatccagctc 3039557 Query: 444 gcccgccg 451 || ||||| Sbjct: 3039556 gcgcgccg 3039549 Score = 287 bits (145), Expect = 3e-74 Identities = 256/293 (87%) Strand = Plus / Minus Query: 159 accggcggcgtgaagaaaccccacaggtacaggcctgggacggtggcgctgcgtgagatc 218 ||||||||||||||||| || ||| | | |||||| || || || ||||| ||||||||| Sbjct: 3045871 accggcggcgtgaagaagccgcaccgcttcaggccaggcaccgtcgcgctccgtgagatc 3045812 Query: 219 cgcaagtaccagaagagcactgagctcctgatccgcaagctgccgttccagcgcctggtg 278 |||||||||||||||||||| ||||| || ||||||||||| || ||||||||||| || Sbjct: 3045811 cgcaagtaccagaagagcacggagctgctcatccgcaagctccccttccagcgcctcgtc 3045752 Query: 279 agggagatcgcccaggacttcaagacggacctccggttccagagccacgcggtgctggcg 338 | ||||||||||||||||||||||| |||||||| ||||||||| ||| || ||| Sbjct: 3045751 cgcgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 3045692 Query: 339 ctccaggaggcggcggaggcctaccttgtcgggctcttcgaggacaccaacctctgcgcc 398 || |||||||| || ||||| ||||| |||||||| ||||||||||||||||| |||||| Sbjct: 3045691 ctgcaggaggccgccgaggcgtacctcgtcgggctgttcgaggacaccaacctgtgcgcc 3045632 Query: 399 atccacgccaagcgcgtcaccatcatgcctaaggacatccagctcgcccgccg 451 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3045631 atccacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcgcgccg 3045579 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Minus Query: 87 gagatggcccgtacgaagcagaccgctcgcaagtccaccggcggcaaggccccgaggaag 146 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1645217 gagatggcccgtacgaagcagaccgcccgcaagtccaccggcggcaaggccccgaggaag 1645158 >emb|X79714.1|LTMRHIS3 L.temulentum mRNA for histone H3 Length = 657 Score = 416 bits (210), Expect = e-113 Identities = 294/322 (91%) Strand = Plus / Plus Query: 131 caaggccccgaggaagtcggcgccgacgaccggcggcgtgaagaaaccccacaggtacag 190 ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||| | ||||| Sbjct: 120 caaggccgcgaggaagtcggccccgaccaccggcggcgtgaagaagccccaccgctacag 179 Query: 191 gcctgggacggtggcgctgcgtgagatccgcaagtaccagaagagcactgagctcctgat 250 ||| || || || |||||||| |||||||||||||||||||||||||| ||||| || || Sbjct: 180 gcccggcaccgtcgcgctgcgcgagatccgcaagtaccagaagagcacggagctgctcat 239 Query: 251 ccgcaagctgccgttccagcgcctggtgagggagatcgcccaggacttcaagacggacct 310 ||||||||| || ||||||||||| || | |||||||| ||||||||||| |||||||| Sbjct: 240 ccgcaagctccccttccagcgcctcgtccgcgagatcgcgcaggacttcaaaacggacct 299 Query: 311 ccggttccagagccacgcggtgctggcgctccaggaggcggcggaggcctaccttgtcgg 370 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 300 gcggttccagagccacgccgtgctggcgctccaggaggcggccgaggcctacctcgtcgg 359 Query: 371 gctcttcgaggacaccaacctctgcgccatccacgccaagcgcgtcaccatcatgcctaa 430 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 360 gctcttcgaggacaccaacctgtgcgccatccacgccaagcgcgtcaccatcatgcccaa 419 Query: 431 ggacatccagctcgcccgccgc 452 |||||||||||||||||||||| Sbjct: 420 ggacatccagctcgcccgccgc 441 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 90 atggcccgtacgaagcagaccgctcgcaagtccaccggcggcaaggccccgaggaag 146 ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 52 atggcccgtaccaagcagaccgcccgcaagtccaccggcggcaaggcccccaggaag 108