BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002j09 (1071 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241604.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 597 e-167 emb|CT837565.1| Oryza sativa (indica cultivar-group) cDNA clone:... 589 e-165 ref|NM_001057091.1| Oryza sativa (japonica cultivar-group) Os03g... 561 e-156 gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic ... 329 1e-86 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 >dbj|AK241604.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065183O12, full insert sequence Length = 1173 Score = 597 bits (301), Expect = e-167 Identities = 570/659 (86%), Gaps = 3/659 (0%) Strand = Plus / Plus Query: 32 gcagcagcaacgcgccgcagcctctccgcgctcctcctgtcctccctcgcgctcccccgt 91 |||||||| || |||||||| |||||||||||||| || ||||||| ||| || | || Sbjct: 298 gcagcagccacccgccgcagtctctccgcgctccttctctcctcccgcgctctgcaacgc 357 Query: 92 cgcctcctccccctcaacgcagccgctgcctccttagcccacctcgctccgtgggcgccg 151 ||| || ||| ||| || ||||| ||||||| |||| ||||||| |||||||||||| Sbjct: 358 cgcttcgccccgctc---gccgccgccgcctcctcagcctacctcgccccgtgggcgccg 414 Query: 152 ccgtcgcgcggggcgaagacgtcgtcgtcaggtgggtctgggtattcgcccctgaacgac 211 ||||| ||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 415 ccgtcacgcggagcgaagaccgcgtcgtcgggtgggtctgggtactcgccgctgaacgac 474 Query: 212 ccgtccccgaactggagcaaccggccgcccaaggagacgatccttctggacggctgcgac 271 |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 475 ccgtccccaaactggagcaatcggccgcccaaggagactatcctgttggacggctgcgac 534 Query: 272 tacgagcactggctcatcgtcatggagttccccaccgaccccaagccctccgaggaagag 331 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 535 tacgagcactggctcatcgtcatggagttcccgaccgatcccaagccctccgaggaagat 594 Query: 332 atggtcgccgcctacgtcaaggtcctcgccgccgtcgtcggaagtgaggaggaagcaaag 391 ||||||||||| || || ||| ||||||||||||||| ||||| ||||||||||| ||| Sbjct: 595 atggtcgccgcatatgttaagaccctcgccgccgtcgtgggaagcgaggaggaagccaag 654 Query: 392 gcgaagatctactcagtgtgcactacaacttacacagggtttggtgcattgatttcggag 451 ||| |||||||| || |||||||||||||| || |||||||| ||||||||||||||| Sbjct: 655 aagaaaatctactctgtctgcactacaacttatactgggtttggcgcattgatttcggag 714 Query: 452 gagctatcatataaagttaaaggattgccgggagttctttgggtattacctgattcgtat 511 ||| ||||||| || |||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 715 gagttatcatacaaggttaaaggattgcctggagttctttgggtattgcctgactcatat 774 Query: 512 ttagatgtgcctaacaaggattacggaggtgatctatttgtagatgggaagatcatacat 571 || |||||||| ||||||||||| ||||| |||||||| |||||||| || |||||||| Sbjct: 775 ttggatgtgccgaacaaggattatggaggagatctattcgtagatggacaggtcatacat 834 Query: 572 agaccacaatttcgatttactgagaggcagcagataaggagtagacctcgtcctcggtat 631 ||||||||||| ||||||||||| ||||| ||| ||||||| | ||||||||||| ||| Sbjct: 835 agaccacaattccgatttactgaaaggcaacaggtaaggagccggcctcgtcctcgctat 894 Query: 632 gataagcgacgagagactatgcaagttgaacggagagaaactatgcagagaggtccttc 690 || | | |||||| |||||||||| ||||| || |||| | ||||||| ||| ||||| Sbjct: 895 gacaggagacgagtgactatgcaaactgaacagaaagaagcaatgcagaaaggaccttc 953 >emb|CT837565.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA034I03, full insert sequence Length = 1220 Score = 589 bits (297), Expect = e-165 Identities = 569/659 (86%), Gaps = 3/659 (0%) Strand = Plus / Plus Query: 32 gcagcagcaacgcgccgcagcctctccgcgctcctcctgtcctccctcgcgctcccccgt 91 |||||||| || |||||||| |||||||||||||| || ||||||| ||| || | || Sbjct: 297 gcagcagccacccgccgcagtctctccgcgctccttctctcctcccgcgctctgcaacgc 356 Query: 92 cgcctcctccccctcaacgcagccgctgcctccttagcccacctcgctccgtgggcgccg 151 ||| || ||| ||| || ||||| ||||||| |||| ||||||| |||||||||||| Sbjct: 357 cgcttcgccccgctc---gccgccgccgcctcctcagcctacctcgccccgtgggcgccg 413 Query: 152 ccgtcgcgcggggcgaagacgtcgtcgtcaggtgggtctgggtattcgcccctgaacgac 211 ||||| ||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 414 ccgtcacgcggagcgaagaccgcgtcgtcgggtgggtctgggtactcgccgctgaacgac 473 Query: 212 ccgtccccgaactggagcaaccggccgcccaaggagacgatccttctggacggctgcgac 271 |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 474 ccgtccccaaactggagcaatcggccgcccaaggagactatcctgttggacggctgcgac 533 Query: 272 tacgagcactggctcatcgtcatggagttccccaccgaccccaagccctccgaggaagag 331 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 534 tacgagcactggctcatcgtcatggagttcccgaccgatcccaagccctccgaggaagat 593 Query: 332 atggtcgccgcctacgtcaaggtcctcgccgccgtcgtcggaagtgaggaggaagcaaag 391 ||||||||||| || || ||| ||||||||||||||| ||||| ||||||||||| ||| Sbjct: 594 atggtcgccgcatatgttaagaccctcgccgccgtcgtgggaagcgaggaggaagccaag 653 Query: 392 gcgaagatctactcagtgtgcactacaacttacacagggtttggtgcattgatttcggag 451 ||| |||||||| || |||||||||||||| || |||||||| ||||||||||||||| Sbjct: 654 aagaaaatctactctgtctgcactacaacttatactgggtttggcgcattgatttcggag 713 Query: 452 gagctatcatataaagttaaaggattgccgggagttctttgggtattacctgattcgtat 511 ||| ||||||| || |||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 714 gagttatcatacaaggttaaaggattgcctggagttctttgggtattgcctgactcatat 773 Query: 512 ttagatgtgcctaacaaggattacggaggtgatctatttgtagatgggaagatcatacat 571 || |||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| Sbjct: 774 ttggatgtgccgaacaaggattatggaggagatctattcgtagatgaacaggtcatacat 833 Query: 572 agaccacaatttcgatttactgagaggcagcagataaggagtagacctcgtcctcggtat 631 ||||||||||| ||||||||||| ||||| ||| ||||||| | ||||||||||| ||| Sbjct: 834 agaccacaattccgatttactgaaaggcaacaggtaaggagccggcctcgtcctcgctat 893 Query: 632 gataagcgacgagagactatgcaagttgaacggagagaaactatgcagagaggtccttc 690 || | | |||||| |||||||||| ||||| || |||| | ||||||| ||| ||||| Sbjct: 894 gacaggagacgagtgactatgcaaactgaacagaaagaagcaatgcagaaaggaccttc 952 >ref|NM_001057091.1| Oryza sativa (japonica cultivar-group) Os03g0581600 (Os03g0581600) mRNA, complete cds Length = 1104 Score = 561 bits (283), Expect = e-156 Identities = 498/569 (87%), Gaps = 3/569 (0%) Strand = Plus / Plus Query: 32 gcagcagcaacgcgccgcagcctctccgcgctcctcctgtcctccctcgcgctcccccgt 91 |||||||| || |||||||| |||||||||||||| || ||||||| ||| || | || Sbjct: 16 gcagcagccacccgccgcagtctctccgcgctccttctctcctcccgcgctctgcaacgc 75 Query: 92 cgcctcctccccctcaacgcagccgctgcctccttagcccacctcgctccgtgggcgccg 151 ||| || ||| ||| || ||||| ||||||| |||| ||||||| |||||||||||| Sbjct: 76 cgcttcgccccgctc---gccgccgccgcctcctcagcctacctcgccccgtgggcgccg 132 Query: 152 ccgtcgcgcggggcgaagacgtcgtcgtcaggtgggtctgggtattcgcccctgaacgac 211 ||||| ||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 133 ccgtcacgcggagcgaagaccgcgtcgtcgggtgggtctgggtactcgccgctgaacgac 192 Query: 212 ccgtccccgaactggagcaaccggccgcccaaggagacgatccttctggacggctgcgac 271 |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 193 ccgtccccaaactggagcaatcggccgcccaaggagactatcctgttggacggctgcgac 252 Query: 272 tacgagcactggctcatcgtcatggagttccccaccgaccccaagccctccgaggaagag 331 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 253 tacgagcactggctcatcgtcatggagttcccgaccgatcccaagccctccgaggaagat 312 Query: 332 atggtcgccgcctacgtcaaggtcctcgccgccgtcgtcggaagtgaggaggaagcaaag 391 ||||||||||| || || ||| ||||||||||||||| ||||| ||||||||||| ||| Sbjct: 313 atggtcgccgcatatgttaagaccctcgccgccgtcgtgggaagcgaggaggaagccaag 372 Query: 392 gcgaagatctactcagtgtgcactacaacttacacagggtttggtgcattgatttcggag 451 ||| |||||||| || |||||||||||||| || |||||||| ||||||||||||||| Sbjct: 373 aagaaaatctactctgtctgcactacaacttatactgggtttggcgcattgatttcggag 432 Query: 452 gagctatcatataaagttaaaggattgccgggagttctttgggtattacctgattcgtat 511 ||| ||||||| || |||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 433 gagttatcatacaaggttaaaggattgcctggagttctttgggtattgcctgactcatat 492 Query: 512 ttagatgtgcctaacaaggattacggaggtgatctatttgtagatgggaagatcatacat 571 || |||||||| ||||||||||| ||||| |||||||| |||||||| || |||||||| Sbjct: 493 ttggatgtgccgaacaaggattatggaggagatctattcgtagatggacaggtcatacat 552 Query: 572 agaccacaatttcgatttactgagaggca 600 ||||||||||| ||||||||||| ||||| Sbjct: 553 agaccacaattccgatttactgaaaggca 581 >gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 329 bits (166), Expect = 1e-86 Identities = 300/344 (87%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 32 gcagcagcaacgcgccgcagcctctccgcgctcctcctgtcctccctcgcgctcccccgt 91 |||||||| || |||||||| |||||||||||||| || ||||||| ||| || | || Sbjct: 28052 gcagcagccacccgccgcagtctctccgcgctccttctctcctcccgcgctctgcaacgc 28111 Query: 92 cgcctcctccccctcaacgcagccgctgcctccttagcccacctcgctccgtgggcgccg 151 ||| || ||| ||| || ||||| ||||||| |||| ||||||| |||||||||||| Sbjct: 28112 cgcttcgccccgctc---gccgccgccgcctcctcagcctacctcgccccgtgggcgccg 28168 Query: 152 ccgtcgcgcggggcgaagacgtcgtcgtcaggtgggtctgggtattcgcccctgaacgac 211 ||||| ||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 28169 ccgtcacgcggagcgaagaccgcgtcgtcgggtgggtctgggtactcgccgctgaacgac 28228 Query: 212 ccgtccccgaactggagcaaccggccgcccaaggagacgatccttctggacggctgcgac 271 |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 28229 ccgtccccaaactggagcaatcggccgcccaaggagactatcctgttggacggctgcgac 28288 Query: 272 tacgagcactggctcatcgtcatggagttccccaccgaccccaagccctccgaggaagag 331 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 28289 tacgagcactggctcatcgtcatggagttcccgaccgatcccaagccctccgaggaagat 28348 Query: 332 atggtcgccgcctacgtcaaggtcctcgccgccgtcgtcggaag 375 ||||||||||| || || ||| ||||||||||||||| ||||| Sbjct: 28349 atggtcgccgcatatgttaagaccctcgccgccgtcgtgggaag 28392 Score = 105 bits (53), Expect = 4e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 542 gatctatttgtagatgggaagatcatacatagaccacaatttcgatttactgagaggcag 601 |||||||| |||||||| || ||||||||||||||||||| ||||||||||| ||||| Sbjct: 32289 gatctattcgtagatggacaggtcatacatagaccacaattccgatttactgaaaggcaa 32348 Query: 602 cagataaggagtagacctcgtcctcggtatgataagcgacgagagactatgcaagttgaa 661 ||| ||||||| | ||||||||||| ||||| | | |||||| |||||||||| |||| Sbjct: 32349 caggtaaggagccggcctcgtcctcgctatgacaggagacgagtgactatgcaaactgaa 32408 Query: 662 cggagagaaactatgcagagaggtccttc 690 | || |||| | ||||||| ||| ||||| Sbjct: 32409 cagaaagaagcaatgcagaaaggaccttc 32437 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 377 gaggaggaagcaaaggcgaagatctactcagtgtgcactacaacttacacagggtttggt 436 ||||||||||| ||| ||| |||||||| || |||||||||||||| || |||||||| Sbjct: 29776 gaggaggaagccaagaagaaaatctactctgtctgcactacaacttatactgggtttggc 29835 Query: 437 gcattgatttcggaggagctatcatataaagttaaagg 474 |||||||||||||||||| ||||||| || |||||||| Sbjct: 29836 gcattgatttcggaggagttatcatacaaggttaaagg 29873 Score = 91.7 bits (46), Expect = 5e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 468 ttaaaggattgccgggagttctttgggtattacctgattcgtatttagatgtgcctaaca 527 ||||||||||||| ||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct: 29958 ttaaaggattgcctggagttctttgggtattgcctgactcatatttggatgtgccgaaca 30017 Query: 528 aggattacggaggt 541 ||||||| |||||| Sbjct: 30018 aggattatggaggt 30031 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 329 bits (166), Expect = 1e-86 Identities = 300/344 (87%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 32 gcagcagcaacgcgccgcagcctctccgcgctcctcctgtcctccctcgcgctcccccgt 91 |||||||| || |||||||| |||||||||||||| || ||||||| ||| || | || Sbjct: 21165166 gcagcagccacccgccgcagtctctccgcgctccttctctcctcccgcgctctgcaacgc 21165225 Query: 92 cgcctcctccccctcaacgcagccgctgcctccttagcccacctcgctccgtgggcgccg 151 ||| || ||| ||| || ||||| ||||||| |||| ||||||| |||||||||||| Sbjct: 21165226 cgcttcgccccgctc---gccgccgccgcctcctcagcctacctcgccccgtgggcgccg 21165282 Query: 152 ccgtcgcgcggggcgaagacgtcgtcgtcaggtgggtctgggtattcgcccctgaacgac 211 ||||| ||||| |||||||| ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 21165283 ccgtcacgcggagcgaagaccgcgtcgtcgggtgggtctgggtactcgccgctgaacgac 21165342 Query: 212 ccgtccccgaactggagcaaccggccgcccaaggagacgatccttctggacggctgcgac 271 |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 21165343 ccgtccccaaactggagcaatcggccgcccaaggagactatcctgttggacggctgcgac 21165402 Query: 272 tacgagcactggctcatcgtcatggagttccccaccgaccccaagccctccgaggaagag 331 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 21165403 tacgagcactggctcatcgtcatggagttcccgaccgatcccaagccctccgaggaagat 21165462 Query: 332 atggtcgccgcctacgtcaaggtcctcgccgccgtcgtcggaag 375 ||||||||||| || || ||| ||||||||||||||| ||||| Sbjct: 21165463 atggtcgccgcatatgttaagaccctcgccgccgtcgtgggaag 21165506 Score = 105 bits (53), Expect = 4e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 542 gatctatttgtagatgggaagatcatacatagaccacaatttcgatttactgagaggcag 601 |||||||| |||||||| || ||||||||||||||||||| ||||||||||| ||||| Sbjct: 21169403 gatctattcgtagatggacaggtcatacatagaccacaattccgatttactgaaaggcaa 21169462 Query: 602 cagataaggagtagacctcgtcctcggtatgataagcgacgagagactatgcaagttgaa 661 ||| ||||||| | ||||||||||| ||||| | | |||||| |||||||||| |||| Sbjct: 21169463 caggtaaggagccggcctcgtcctcgctatgacaggagacgagtgactatgcaaactgaa 21169522 Query: 662 cggagagaaactatgcagagaggtccttc 690 | || |||| | ||||||| ||| ||||| Sbjct: 21169523 cagaaagaagcaatgcagaaaggaccttc 21169551 Score = 99.6 bits (50), Expect = 2e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 377 gaggaggaagcaaaggcgaagatctactcagtgtgcactacaacttacacagggtttggt 436 ||||||||||| ||| ||| |||||||| || |||||||||||||| || |||||||| Sbjct: 21166890 gaggaggaagccaagaagaaaatctactctgtctgcactacaacttatactgggtttggc 21166949 Query: 437 gcattgatttcggaggagctatcatataaagttaaagg 474 |||||||||||||||||| ||||||| || |||||||| Sbjct: 21166950 gcattgatttcggaggagttatcatacaaggttaaagg 21166987 Score = 91.7 bits (46), Expect = 5e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 468 ttaaaggattgccgggagttctttgggtattacctgattcgtatttagatgtgcctaaca 527 ||||||||||||| ||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct: 21167072 ttaaaggattgcctggagttctttgggtattgcctgactcatatttggatgtgccgaaca 21167131 Query: 528 aggattacggaggt 541 ||||||| |||||| Sbjct: 21167132 aggattatggaggt 21167145