BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002e11 (958 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK109525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 765 0.0 ref|NM_001055528.1| Oryza sativa (japonica cultivar-group) Os03g... 757 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 236 1e-58 gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 236 1e-58 gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 236 1e-58 >dbj|AK109525.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-G08, full insert sequence Length = 981 Score = 765 bits (386), Expect = 0.0 Identities = 624/702 (88%), Gaps = 6/702 (0%) Strand = Plus / Plus Query: 83 tcctcctccctcccccgctcgctggcgtgcaggaggccactg---tcctcccctctccac 139 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 81 tcctcctccctcccccgctcgctggcgtccaggaggccgctgccctcctcccctctccgc 140 Query: 140 gcc---aggtcccgatccccgcgccgctgccgctttggatcgcggtcgcttcaacggttg 196 | | ||| |||| || || |||||||||||||| || || || ||||| || ||| || Sbjct: 141 ggcgggaggccccggtctccccgccgctgccgcttcgggtcccgctcgctccaccggctg 200 Query: 197 cgagcccgagcgaggaagggcgacaccgaggatccgtacgggccgtacccctgggatcag 256 ||||| ||||| |||||||||| ||||||||| ||| ||||| ||||| ||||||||| Sbjct: 201 cgagctcgagctgggaagggcgatcccgaggatctgtatgggccctacccatgggatcag 260 Query: 257 tccttggatctcactactggattagacattcactgggtgccagaagatagagtcacactg 316 |||||||||||||| ||||| | || ||||| ||||||||||||||||||||||||||| Sbjct: 261 tccttggatctcaccactggcctcgatattcagtgggtgccagaagatagagtcacactg 320 Query: 317 ttcacttctgatggtcttattcaaattgggggttccctggttcctcgtcgaattactgct 376 |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| | Sbjct: 321 ttcacttctgatgggcttgttcaaatagggggttccctggttcctcgtcgaattactcca 380 Query: 377 tccgagaagaggcaacaaaaaacgaaaggcacacaacaatttcgccggtttcaggagagc 436 || ||||||||||||| |||| ||||| | |||| | | | ||||||||||||||| Sbjct: 381 tcagagaagaggcaacgaaaagtaaaaggtatacaaaatatccaacggtttcaggagagc 440 Query: 437 tcttacatggatccaaatcaaagtctttgccttggagcactgtttaacatagcagcaaca 496 || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 441 tcgtacatggacccaaatcaaagtctttgccttggagcactatttaacatagcagcaaca 500 Query: 497 aatggcctagacatgggtagaagactatgcatctttggcttttgtcggtctattgaaatg 556 ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 501 aatggtctagatatgggaagaagactatgcatctttggcttttgtcgctctattgaaatg 560 Query: 557 ctaagcgatgtggtggaagatacagtattggagcatggtggtgaggttgtcactgcagag 616 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 561 ctaagtgatgtagtggaagatacagtattggagcatggtggtgaggttgtcacggcagag 620 Query: 617 aaggcaagcaacgatggccttcaggagaagttgactatgtctgttgcggtaccattgttg 676 ||||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 621 aaggcaagcaaagatggcctccaggagaagttgaccatgtctgttgcagtgccattgttg 680 Query: 677 tggggtgttcctccagcgtcagagaccctccatgtcgcagtgcggagcggtggaggtatt 736 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 681 tggggtgttcctccagcatcagagaccctccatgtcgcggtgcggagcggtggaggcatt 740 Query: 737 gtcgagaagatatattggcagtgggacttcttctaaaagtcc 778 || |||||||| || ||||| |||||||| || ||||||||| Sbjct: 741 gtggagaagatctactggcaatgggacttattttaaaagtcc 782 >ref|NM_001055528.1| Oryza sativa (japonica cultivar-group) Os03g0152600 (Os03g0152600) mRNA, complete cds Length = 981 Score = 757 bits (382), Expect = 0.0 Identities = 623/702 (88%), Gaps = 6/702 (0%) Strand = Plus / Plus Query: 83 tcctcctccctcccccgctcgctggcgtgcaggaggccactg---tcctcccctctccac 139 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 81 tcctcctccctcccccgctcgctggcgtccaggaggccgctgccctcctcccctctccgc 140 Query: 140 gcc---aggtcccgatccccgcgccgctgccgctttggatcgcggtcgcttcaacggttg 196 | | ||| |||| || || |||||||||||||| || || || ||||| || ||| || Sbjct: 141 ggcgggaggccccggtctccccgccgctgccgcttcgggtcccgctcgctccaccggctg 200 Query: 197 cgagcccgagcgaggaagggcgacaccgaggatccgtacgggccgtacccctgggatcag 256 ||||| ||||| |||||| ||| ||||||||| ||| ||||| ||||| ||||||||| Sbjct: 201 cgagctcgagctgggaaggacgatcccgaggatctgtatgggccctacccatgggatcag 260 Query: 257 tccttggatctcactactggattagacattcactgggtgccagaagatagagtcacactg 316 |||||||||||||| ||||| | || ||||| ||||||||||||||||||||||||||| Sbjct: 261 tccttggatctcaccactggcctcgatattcagtgggtgccagaagatagagtcacactg 320 Query: 317 ttcacttctgatggtcttattcaaattgggggttccctggttcctcgtcgaattactgct 376 |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| | Sbjct: 321 ttcacttctgatgggcttgttcaaatagggggttccctggttcctcgtcgaattactcca 380 Query: 377 tccgagaagaggcaacaaaaaacgaaaggcacacaacaatttcgccggtttcaggagagc 436 || ||||||||||||| |||| ||||| | |||| | | | ||||||||||||||| Sbjct: 381 tcagagaagaggcaacgaaaagtaaaaggtatacaaaatatccaacggtttcaggagagc 440 Query: 437 tcttacatggatccaaatcaaagtctttgccttggagcactgtttaacatagcagcaaca 496 || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 441 tcgtacatggacccaaatcaaagtctttgccttggagcactatttaacatagcagcaaca 500 Query: 497 aatggcctagacatgggtagaagactatgcatctttggcttttgtcggtctattgaaatg 556 ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 501 aatggtctagatatgggaagaagactatgcatctttggcttttgtcgctctattgaaatg 560 Query: 557 ctaagcgatgtggtggaagatacagtattggagcatggtggtgaggttgtcactgcagag 616 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 561 ctaagtgatgtagtggaagatacagtattggagcatggtggtgaggttgtcacggcagag 620 Query: 617 aaggcaagcaacgatggccttcaggagaagttgactatgtctgttgcggtaccattgttg 676 ||||||||||| |||||||| |||||||||||||| ||||||||||| || ||||||||| Sbjct: 621 aaggcaagcaaagatggcctccaggagaagttgaccatgtctgttgcagtgccattgttg 680 Query: 677 tggggtgttcctccagcgtcagagaccctccatgtcgcagtgcggagcggtggaggtatt 736 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 681 tggggtgttcctccagcatcagagaccctccatgtcgcggtgcggagcggtggaggcatt 740 Query: 737 gtcgagaagatatattggcagtgggacttcttctaaaagtcc 778 || |||||||| || ||||| |||||||| || ||||||||| Sbjct: 741 gtggagaagatctactggcaatgggacttattttaaaagtcc 782 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 236 bits (119), Expect = 1e-58 Identities = 164/179 (91%) Strand = Plus / Minus Query: 600 aggttgtcactgcagagaaggcaagcaacgatggccttcaggagaagttgactatgtctg 659 |||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 2879641 aggttgtcacggcagagaaggcaagcaaagatggcctccaggagaagttgaccatgtctg 2879582 Query: 660 ttgcggtaccattgttgtggggtgttcctccagcgtcagagaccctccatgtcgcagtgc 719 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 2879581 ttgcagtgccattgttgtggggtgttcctccagcatcagagaccctccatgtcgcggtgc 2879522 Query: 720 ggagcggtggaggtattgtcgagaagatatattggcagtgggacttcttctaaaagtcc 778 ||||||||||||| ||||| |||||||| || ||||| |||||||| || ||||||||| Sbjct: 2879521 ggagcggtggaggcattgtggagaagatctactggcaatgggacttattttaaaagtcc 2879463 Score = 161 bits (81), Expect = 6e-36 Identities = 96/101 (95%) Strand = Plus / Minus Query: 503 ctagacatgggtagaagactatgcatctttggcttttgtcggtctattgaaatgctaagc 562 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2880169 ctagatatgggaagaagactatgcatctttggcttttgtcgctctattgaaatgctaagt 2880110 Query: 563 gatgtggtggaagatacagtattggagcatggtggtgaggt 603 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2880109 gatgtagtggaagatacagtattggagcatggtggtgaggt 2880069 Score = 147 bits (74), Expect = 1e-31 Identities = 86/90 (95%) Strand = Plus / Minus Query: 284 attcactgggtgccagaagatagagtcacactgttcacttctgatggtcttattcaaatt 343 ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 2881513 attcagtgggtgccagaagatagagtcacactgttcacttctgatgggcttgttcaaata 2881454 Query: 344 gggggttccctggttcctcgtcgaattact 373 |||||||||||||||||||||||||||||| Sbjct: 2881453 gggggttccctggttcctcgtcgaattact 2881424 Score = 135 bits (68), Expect = 4e-28 Identities = 168/200 (84%), Gaps = 6/200 (3%) Strand = Plus / Minus Query: 83 tcctcctccctcccccgctcgctggcgtgcaggaggccactg---tcctcccctctccac 139 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 2881992 tcctcctccctcccccgctcgctggcgtccaggaggccgctgccctcctcccctctccgc 2881933 Query: 140 gcc---aggtcccgatccccgcgccgctgccgctttggatcgcggtcgcttcaacggttg 196 | | ||| |||| || || |||||||||||||| || || || ||||| || ||| || Sbjct: 2881932 ggcgggaggccccggtctccccgccgctgccgcttcgggtcccgctcgctccaccggctg 2881873 Query: 197 cgagcccgagcgaggaagggcgacaccgaggatccgtacgggccgtacccctgggatcag 256 ||||| ||||| |||||| ||| ||||||||| ||| ||||| ||||| ||||||||| Sbjct: 2881872 cgagctcgagctgggaaggacgatcccgaggatctgtatgggccctacccatgggatcag 2881813 Query: 257 tccttggatctcactactgg 276 |||||||||||||| ||||| Sbjct: 2881812 tccttggatctcaccactgg 2881793 Score = 133 bits (67), Expect = 1e-27 Identities = 76/79 (96%) Strand = Plus / Minus Query: 422 cggtttcaggagagctcttacatggatccaaatcaaagtctttgccttggagcactgttt 481 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 2880322 cggtttcaggagagctcgtacatggacccaaatcaaagtctttgccttggagcactattt 2880263 Query: 482 aacatagcagcaacaaatg 500 ||||||||||||||||||| Sbjct: 2880262 aacatagcagcaacaaatg 2880244 >gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 236 bits (119), Expect = 1e-58 Identities = 164/179 (91%) Strand = Plus / Minus Query: 600 aggttgtcactgcagagaaggcaagcaacgatggccttcaggagaagttgactatgtctg 659 |||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 17017 aggttgtcacggcagagaaggcaagcaaagatggcctccaggagaagttgaccatgtctg 16958 Query: 660 ttgcggtaccattgttgtggggtgttcctccagcgtcagagaccctccatgtcgcagtgc 719 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 16957 ttgcagtgccattgttgtggggtgttcctccagcatcagagaccctccatgtcgcggtgc 16898 Query: 720 ggagcggtggaggtattgtcgagaagatatattggcagtgggacttcttctaaaagtcc 778 ||||||||||||| ||||| |||||||| || ||||| |||||||| || ||||||||| Sbjct: 16897 ggagcggtggaggcattgtggagaagatctactggcaatgggacttattttaaaagtcc 16839 Score = 161 bits (81), Expect = 6e-36 Identities = 96/101 (95%) Strand = Plus / Minus Query: 503 ctagacatgggtagaagactatgcatctttggcttttgtcggtctattgaaatgctaagc 562 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17545 ctagatatgggaagaagactatgcatctttggcttttgtcgctctattgaaatgctaagt 17486 Query: 563 gatgtggtggaagatacagtattggagcatggtggtgaggt 603 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17485 gatgtagtggaagatacagtattggagcatggtggtgaggt 17445 Score = 147 bits (74), Expect = 1e-31 Identities = 86/90 (95%) Strand = Plus / Minus Query: 284 attcactgggtgccagaagatagagtcacactgttcacttctgatggtcttattcaaatt 343 ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 18889 attcagtgggtgccagaagatagagtcacactgttcacttctgatgggcttgttcaaata 18830 Query: 344 gggggttccctggttcctcgtcgaattact 373 |||||||||||||||||||||||||||||| Sbjct: 18829 gggggttccctggttcctcgtcgaattact 18800 Score = 135 bits (68), Expect = 4e-28 Identities = 168/200 (84%), Gaps = 6/200 (3%) Strand = Plus / Minus Query: 83 tcctcctccctcccccgctcgctggcgtgcaggaggccactg---tcctcccctctccac 139 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 19368 tcctcctccctcccccgctcgctggcgtccaggaggccgctgccctcctcccctctccgc 19309 Query: 140 gcc---aggtcccgatccccgcgccgctgccgctttggatcgcggtcgcttcaacggttg 196 | | ||| |||| || || |||||||||||||| || || || ||||| || ||| || Sbjct: 19308 ggcgggaggccccggtctccccgccgctgccgcttcgggtcccgctcgctccaccggctg 19249 Query: 197 cgagcccgagcgaggaagggcgacaccgaggatccgtacgggccgtacccctgggatcag 256 ||||| ||||| |||||| ||| ||||||||| ||| ||||| ||||| ||||||||| Sbjct: 19248 cgagctcgagctgggaaggacgatcccgaggatctgtatgggccctacccatgggatcag 19189 Query: 257 tccttggatctcactactgg 276 |||||||||||||| ||||| Sbjct: 19188 tccttggatctcaccactgg 19169 Score = 133 bits (67), Expect = 1e-27 Identities = 76/79 (96%) Strand = Plus / Minus Query: 422 cggtttcaggagagctcttacatggatccaaatcaaagtctttgccttggagcactgttt 481 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 17698 cggtttcaggagagctcgtacatggacccaaatcaaagtctttgccttggagcactattt 17639 Query: 482 aacatagcagcaacaaatg 500 ||||||||||||||||||| Sbjct: 17638 aacatagcagcaacaaatg 17620 >gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 236 bits (119), Expect = 1e-58 Identities = 164/179 (91%) Strand = Plus / Minus Query: 600 aggttgtcactgcagagaaggcaagcaacgatggccttcaggagaagttgactatgtctg 659 |||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 151486 aggttgtcacggcagagaaggcaagcaaagatggcctccaggagaagttgaccatgtctg 151427 Query: 660 ttgcggtaccattgttgtggggtgttcctccagcgtcagagaccctccatgtcgcagtgc 719 |||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 151426 ttgcagtgccattgttgtggggtgttcctccagcatcagagaccctccatgtcgcggtgc 151367 Query: 720 ggagcggtggaggtattgtcgagaagatatattggcagtgggacttcttctaaaagtcc 778 ||||||||||||| ||||| |||||||| || ||||| |||||||| || ||||||||| Sbjct: 151366 ggagcggtggaggcattgtggagaagatctactggcaatgggacttattttaaaagtcc 151308 Score = 161 bits (81), Expect = 6e-36 Identities = 96/101 (95%) Strand = Plus / Minus Query: 503 ctagacatgggtagaagactatgcatctttggcttttgtcggtctattgaaatgctaagc 562 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 152014 ctagatatgggaagaagactatgcatctttggcttttgtcgctctattgaaatgctaagt 151955 Query: 563 gatgtggtggaagatacagtattggagcatggtggtgaggt 603 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 151954 gatgtagtggaagatacagtattggagcatggtggtgaggt 151914 Score = 147 bits (74), Expect = 1e-31 Identities = 86/90 (95%) Strand = Plus / Minus Query: 284 attcactgggtgccagaagatagagtcacactgttcacttctgatggtcttattcaaatt 343 ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 153358 attcagtgggtgccagaagatagagtcacactgttcacttctgatgggcttgttcaaata 153299 Query: 344 gggggttccctggttcctcgtcgaattact 373 |||||||||||||||||||||||||||||| Sbjct: 153298 gggggttccctggttcctcgtcgaattact 153269 Score = 135 bits (68), Expect = 4e-28 Identities = 168/200 (84%), Gaps = 6/200 (3%) Strand = Plus / Minus Query: 83 tcctcctccctcccccgctcgctggcgtgcaggaggccactg---tcctcccctctccac 139 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | Sbjct: 153837 tcctcctccctcccccgctcgctggcgtccaggaggccgctgccctcctcccctctccgc 153778 Query: 140 gcc---aggtcccgatccccgcgccgctgccgctttggatcgcggtcgcttcaacggttg 196 | | ||| |||| || || |||||||||||||| || || || ||||| || ||| || Sbjct: 153777 ggcgggaggccccggtctccccgccgctgccgcttcgggtcccgctcgctccaccggctg 153718 Query: 197 cgagcccgagcgaggaagggcgacaccgaggatccgtacgggccgtacccctgggatcag 256 ||||| ||||| |||||| ||| ||||||||| ||| ||||| ||||| ||||||||| Sbjct: 153717 cgagctcgagctgggaaggacgatcccgaggatctgtatgggccctacccatgggatcag 153658 Query: 257 tccttggatctcactactgg 276 |||||||||||||| ||||| Sbjct: 153657 tccttggatctcaccactgg 153638 Score = 133 bits (67), Expect = 1e-27 Identities = 76/79 (96%) Strand = Plus / Minus Query: 422 cggtttcaggagagctcttacatggatccaaatcaaagtctttgccttggagcactgttt 481 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 152167 cggtttcaggagagctcgtacatggacccaaatcaaagtctttgccttggagcactattt 152108 Query: 482 aacatagcagcaacaaatg 500 ||||||||||||||||||| Sbjct: 152107 aacatagcagcaacaaatg 152089