BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst002b24
         (667 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001051731.1| Oryza sativa (japonica cultivar-group) Os01g...   157   7e-35
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   117   6e-23
dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D...   117   6e-23
dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D...   117   6e-23

>ref|NM_001051731.1| Oryza sativa (japonica cultivar-group) Os01g0916700 (Os01g0916700)
           mRNA, complete cds
          Length = 423

 Score =  157 bits (79), Expect = 7e-35
 Identities = 114/125 (91%), Gaps = 3/125 (2%)
 Strand = Plus / Plus

                                                                       
Query: 328 gaggaggacgaggaggagccggtttttgttcttacggacgagtgggcagaattcttcgcc 387
           |||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 298 gaggaggaagaggaggagccggtttttgttctgaccgacgagtgggcggaattcttcgcc 357

                                                                       
Query: 388 aaatccgaggccaagaggagactggccaaa---cagcagaagaagaacaagggtcggaag 444
           |||||||| || ||||||||||| || |||   |||||||||||||||||||||||||||
Sbjct: 358 aaatccgacgcaaagaggagactcgctaaacagcagcagaagaagaacaagggtcggaag 417

                
Query: 445 aagta 449
           |||||
Sbjct: 418 aagta 422



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 37  caccaccaccgactccacctccacctcgatccccgccaccaccatcacatccacatccac 96
           ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||||||| |
Sbjct: 28  caccaccaccgtctccacctccacctcgatccgcggcaccaccaccacgtccacatccgc 87

                       
Query: 97  ctctgccaccac 108
            |||||| ||||
Sbjct: 88  ttctgcccccac 99


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  117 bits (59), Expect = 6e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 328      gaggaggacgaggaggagccggtttttgttcttacggacgagtgggcagaattcttcgcc 387
                |||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 39952236 gaggaggaagaggaggagccggtttttgttctgaccgacgagtgggcggaattcttcgcc 39952295

                                       
Query: 388      aaatccgaggccaagaggagact 410
                |||||||| || |||||||||||
Sbjct: 39952296 aaatccgacgcaaagaggagact 39952318



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                            
Query: 37       caccaccaccgactccacctccacctcgatccccgccaccaccatcacatccacatccac 96
                ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||||||| |
Sbjct: 39951878 caccaccaccgtctccacctccacctcgatccgcggcaccaccaccacgtccacatccgc 39951937

                            
Query: 97       ctctgccaccac 108
                 |||||| ||||
Sbjct: 39951938 ttctgcccccac 39951949


>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413C03
          Length = 162161

 Score =  117 bits (59), Expect = 6e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                         
Query: 328   gaggaggacgaggaggagccggtttttgttcttacggacgagtgggcagaattcttcgcc 387
             |||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 43687 gaggaggaagaggaggagccggtttttgttctgaccgacgagtgggcggaattcttcgcc 43746

                                    
Query: 388   aaatccgaggccaagaggagact 410
             |||||||| || |||||||||||
Sbjct: 43747 aaatccgacgcaaagaggagact 43769



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                         
Query: 37    caccaccaccgactccacctccacctcgatccccgccaccaccatcacatccacatccac 96
             ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||||||| |
Sbjct: 43329 caccaccaccgtctccacctccacctcgatccgcggcaccaccaccacgtccacatccgc 43388

                         
Query: 97    ctctgccaccac 108
              |||||| ||||
Sbjct: 43389 ttctgcccccac 43400


>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004D12
          Length = 138136

 Score =  117 bits (59), Expect = 6e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                          
Query: 328    gaggaggacgaggaggagccggtttttgttcttacggacgagtgggcagaattcttcgcc 387
              |||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 132944 gaggaggaagaggaggagccggtttttgttctgaccgacgagtgggcggaattcttcgcc 133003

                                     
Query: 388    aaatccgaggccaagaggagact 410
              |||||||| || |||||||||||
Sbjct: 133004 aaatccgacgcaaagaggagact 133026



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                          
Query: 37     caccaccaccgactccacctccacctcgatccccgccaccaccatcacatccacatccac 96
              ||||||||||| |||||||||||||||||||| || |||||||| ||| ||||||||| |
Sbjct: 132586 caccaccaccgtctccacctccacctcgatccgcggcaccaccaccacgtccacatccgc 132645

                          
Query: 97     ctctgccaccac 108
               |||||| ||||
Sbjct: 132646 ttctgcccccac 132657