BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst002b20
         (671 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AF483658.1| Zea mays subsp. mays b1 gene, b1-B-Peru allele, g...   196   8e-47
gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b...   172   1e-39
gb|AF475145.1| Zea mays subsp. mays chromosome 2 genomic sequence     172   1e-39
gb|AY078064.1| Zea mays subsp. mays b1 gene, b1-b-K55 allele, pa...   172   1e-39
emb|CT833252.1| Oryza sativa (indica cultivar-group) cDNA clone:...   137   6e-29

>gb|AF483658.1| Zea mays subsp. mays b1 gene, b1-B-Peru allele, genomic sequence
          Length = 9163

 Score =  196 bits (99), Expect = 8e-47
 Identities = 199/231 (86%), Gaps = 6/231 (2%)
 Strand = Plus / Plus

                                                                        
Query: 166  cacggggcgatggcgtcgtgctggggccgcttcggcctcgcggcgctgtggcacaggatc 225
            |||||| ||||||| || ||||||||||||||||||  ||| |||||||||| |||| | 
Sbjct: 1840 cacgggacgatggcctcctgctggggccgcttcggcgccgccgcgctgtggcgcaggcta 1899

                                                                        
Query: 226  cggcagc---tcagcctggcgcggcgcaggaggcggcacggccgctccatcctcggcgcc 282
            |||| ||   ||||||||| |||||||||| |||||| |||||||||| ||||||||| |
Sbjct: 1900 cggcggcgtgtcagcctggtgcggcgcaggcggcggcgcggccgctccctcctcggcggc 1959

                                                                        
Query: 283  ggc---gggctcaactacgacccgttcagctacgcgcagaacttcgacggcggcggcctc 339
            |||   |||||||||||||||||| |||||||||||||||||||||||| |||  |||| 
Sbjct: 1960 ggcggcgggctcaactacgacccgctcagctacgcgcagaacttcgacgacgggtgcctg 2019

                                                               
Query: 340  gagccgcgcgagccggacttcacggccagattcgcgcccgcgcgcaacgcc 390
            |||  |||||||||||||||||  ||||| ||||||||||||||| |||||
Sbjct: 2020 gaggagcgcgagccggacttcagcgccaggttcgcgcccgcgcgccacgcc 2070


>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1
              through 3 and partial cds
          Length = 107840

 Score =  172 bits (87), Expect = 1e-39
 Identities = 193/228 (84%), Gaps = 9/228 (3%)
 Strand = Plus / Minus

                                                                          
Query: 166    cacggggcgatggcgtcgtgctggggccgcttcggcctcgcggcgctgtggcacaggatc 225
              |||||| ||||||| || ||||||||||||||||||  ||| |||||||||| |||| | 
Sbjct: 107832 cacgggacgatggcctcctgctggggccgcttcggcgccgccgcgctgtggcgcaggcta 107773

                                                                          
Query: 226    cggcagc---tcagcctggcgcggcgcaggaggcggcacggccgctccatcctcggcgcc 282
              |||| ||   ||||||||| |||||||||| |||||| |||||||||| |||||||||  
Sbjct: 107772 cggcggcgtgtcagcctggtgcggcgcaggcggcggcgcggccgctccctcctcggcg-- 107715

                                                                          
Query: 283    ggcgggctcaactacgacccgttcagctacgcgcagaacttcgacggcggcggcctcgag 342
                  |||| |||||||||||| |||||||||||||||||||||||| |||  |||| |||
Sbjct: 107714 ----ggctaaactacgacccgctcagctacgcgcagaacttcgacgacgggtgcctggag 107659

                                                              
Query: 343    ccgcgcgagccggacttcacggccagattcgcgcccgcgcgcaacgcc 390
                |||||||||||||||||  ||||| ||||||||||||||| |||||
Sbjct: 107658 gagcgcgagccggacttcagcgccaggttcgcgcccgcgcgccacgcc 107611


>gb|AF475145.1| Zea mays subsp. mays chromosome 2 genomic sequence
          Length = 4882

 Score =  172 bits (87), Expect = 1e-39
 Identities = 193/228 (84%), Gaps = 9/228 (3%)
 Strand = Plus / Plus

                                                                        
Query: 166  cacggggcgatggcgtcgtgctggggccgcttcggcctcgcggcgctgtggcacaggatc 225
            |||||| ||||||| || ||||||||||||||||||  ||| |||||||||| |||| | 
Sbjct: 3961 cacgggacgatggcctcctgctggggccgcttcggcgccgccgcgctgtggcgcaggcta 4020

                                                                        
Query: 226  cggcagc---tcagcctggcgcggcgcaggaggcggcacggccgctccatcctcggcgcc 282
            |||| ||   ||||||||| |||||||||| |||||| |||||||||| |||||||||  
Sbjct: 4021 cggcggcgtgtcagcctggtgcggcgcaggcggcggcgcggccgctccctcctcggcg-- 4078

                                                                        
Query: 283  ggcgggctcaactacgacccgttcagctacgcgcagaacttcgacggcggcggcctcgag 342
                |||| |||||||||||| |||||||||||||||||||||||| |||  |||| |||
Sbjct: 4079 ----ggctaaactacgacccgctcagctacgcgcagaacttcgacgacgggtgcctggag 4134

                                                            
Query: 343  ccgcgcgagccggacttcacggccagattcgcgcccgcgcgcaacgcc 390
              |||||||||||||||||  ||||| ||||||||||||||| |||||
Sbjct: 4135 gagcgcgagccggacttcagcgccaggttcgcgcccgcgcgccacgcc 4182


>gb|AY078064.1| Zea mays subsp. mays b1 gene, b1-b-K55 allele, partial sequence
          Length = 10004

 Score =  172 bits (87), Expect = 1e-39
 Identities = 193/228 (84%), Gaps = 9/228 (3%)
 Strand = Plus / Plus

                                                                        
Query: 166  cacggggcgatggcgtcgtgctggggccgcttcggcctcgcggcgctgtggcacaggatc 225
            |||||| ||||||| || ||||||||||||||||||  ||| |||||||||| |||| | 
Sbjct: 3419 cacgggacgatggcctcctgctggggccgcttcggcgccgccgcgctgtggcgcaggcta 3478

                                                                        
Query: 226  cggcagc---tcagcctggcgcggcgcaggaggcggcacggccgctccatcctcggcgcc 282
            |||| ||   ||||||||| |||||||||| |||||| |||||||||| |||||||||  
Sbjct: 3479 cggcggcgtgtcagcctggtgcggcgcaggcggcggcgcggccgctccctcctcggcg-- 3536

                                                                        
Query: 283  ggcgggctcaactacgacccgttcagctacgcgcagaacttcgacggcggcggcctcgag 342
                |||| |||||||||||| |||||||||||||||||||||||| |||  |||| |||
Sbjct: 3537 ----ggctaaactacgacccgctcagctacgcgcagaacttcgacgacgggtgcctggag 3592

                                                            
Query: 343  ccgcgcgagccggacttcacggccagattcgcgcccgcgcgcaacgcc 390
              |||||||||||||||||  ||||| ||||||||||||||| |||||
Sbjct: 3593 gagcgcgagccggacttcagcgccaggttcgcgcccgcgcgccacgcc 3640


>emb|CT833252.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN064E22, full
           insert sequence
          Length = 851

 Score =  137 bits (69), Expect = 6e-29
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                       
Query: 261 cggccgctccatcctcggcgccggcgggctcaactacgacccgttcagctacgcgcagaa 320
           |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 288 cggccgctccatcctcggcgccggggggctcaactacgacccgctcagctacgcgcagaa 347

                                    
Query: 321 cttcgacggcggcggcctcgagccg 345
           |||||||| |||| |||||||||||
Sbjct: 348 cttcgacgacggctgcctcgagccg 372



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 179 cgtcgtgctggggccgcttcggcctcgcggcgctgtggcacaggatccggcagctcagcc 238
           ||||||||||||||||  |||| ||||||||||||||||||||| | || ||||||||| 
Sbjct: 191 cgtcgtgctggggccggctcgggctcgcggcgctgtggcacaggctgcgtcagctcagcg 250

                                     
Query: 239 tggcgcggcgcaggaggcggcacggc 264
           |||||||||| ||| |||||||||||
Sbjct: 251 tggcgcggcggaggcggcggcacggc 276