BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002b03 (1207 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein... 611 e-171 gb|AY109584.1| Zea mays CL2436_1 mRNA sequence 595 e-166 gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence 555 e-154 gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence 511 e-141 ref|NM_001059207.1| Oryza sativa (japonica cultivar-group) Os04g... 509 e-141 >gb|M77224.1|MZERFESPA Zea mays mitochondrial Rieske Fe-S protein mRNA, complete cds Length = 1197 Score = 611 bits (308), Expect = e-171 Identities = 620/724 (85%) Strand = Plus / Plus Query: 239 gacgacggctcggcccgcgggcgcgtccagccccggttctccatcggttcgtctttcttc 298 ||||||| |||||| ||||| || |||||| ||||||||||||| || | ||||| Sbjct: 210 gacgacgactcggctcgcggacggagccagccgcggttctccatcgactcccccttcttt 269 Query: 299 gccgctgccagaggtttttcttcgactgaaacgcttgtaccaaggaatgaagatgctggc 358 | |||| |||| ||||| ||||| |||||||| |||| |||||||| ||||||| ||| Sbjct: 270 gtcgcttccaggggtttctcttctactgaaacagttgtcccaaggaaccaagatgcgggc 329 Query: 359 ttggcggaactcccagcaactgtggctgcagtgaagaatcctgacccaaaagtgctttat 418 | || || |||||||||||||||||||| |||||||||||| |||| || ||| ||||| Sbjct: 330 ctagctgacctcccagcaactgtggctgctgtgaagaatcctaaccctaaggtggtttat 389 Query: 419 gacgagtacaaccatgagaggtatgctccgggagatcccagcaaaagggccttcgcctac 478 || |||||||||||||| || ||| |||| |||||||||||||| | ||||| || ||| Sbjct: 390 gatgagtacaaccatgaaagatatcctcctggagatcccagcaagcgtgcctttgcatac 449 Query: 479 tttgttctaagtggtgggagattcatatatgcatcactgctgcgtctcctcatcctgaag 538 ||||| || ||||||||||| |||||||||||||||||||||||||| ||| | |||||| Sbjct: 450 tttgtcctgagtggtgggaggttcatatatgcatcactgctgcgtcttctcgtactgaag 509 Query: 539 tttgtcttgagtatgtcagccagtaaagatgtgcttgcgcttgcgtccattgaggttgat 598 |||||| |||| |||||||| || || ||||||||||| ||||| || ||||||| || Sbjct: 510 tttgtcctgagcatgtcagcaagcaaggatgtgcttgcccttgcttcacttgaggtggac 569 Query: 599 ctgtccagcatcgaacctggcagcacggtgactgtgaagtggcgtggaaagccagtcttt 658 || ||||||||||| || || | ||| ||||| |||||||||||||||||||||||||| Sbjct: 570 ctctccagcatcgagccagggaccacagtgaccgtgaagtggcgtggaaagccagtcttc 629 Query: 659 atcaggcgacggacagaggatgacatcaagctggccaacagcgtgaatgttgcatccctc 718 |||||||| ||||||||||||||||||||||| |||||||| ||| |||| |||||||| Sbjct: 630 atcaggcgtcggacagaggatgacatcaagcttgccaacagtgtggatgtggcatccctg 689 Query: 719 cgccacccgcagcaggacgcggagcgtgtgaagaacccagagtggctggtggtaatcggt 778 |||||||| ||||||| || ||||||||||||||||| |||||||||||||| || || Sbjct: 690 cgccacccagagcaggatgcagagcgtgtgaagaaccctgagtggctggtggtcattggc 749 Query: 779 gtctgcacacatcttggttgcattcctctccccaatgctggtgacttcggcggctggttc 838 || ||||| || || || ||||| || || || ||||| || ||||| |||||||||||| Sbjct: 750 gtgtgcacgcacctcggctgcatcccactacctaatgccggagactttggcggctggttc 809 Query: 839 tgcccatgccatggttcccactacgacatatccggaagaatccgcaagggccctgccccg 898 ||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||| Sbjct: 810 tgcccatgccatggttcccactatgacatttccgggaggatccgcaagggccctgcgccg 869 Query: 899 ttcaacctcgaggtccccacctacagtttcctggaggagaataagctgctcataggctaa 958 ||||||||||||||||| |||||||||||| |||||||||| || |||||| |||||||| Sbjct: 870 ttcaacctcgaggtccctacctacagtttcttggaggagaacaaactgctcgtaggctaa 929 Query: 959 gagc 962 |||| Sbjct: 930 gagc 933 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Plus Query: 118 cgacgcgatgctgagggttgcggggagcaggatctcgtcttccctgtcctggcggcccgc 177 |||| |||||||| ||||||||||||| ||| ||||||||||||| |||||||| ||||| Sbjct: 101 cgacacgatgctgcgggttgcggggagaaggctctcgtcttccctctcctggcgccccgc 160 Query: 178 cgcggcgg 185 |||||||| Sbjct: 161 cgcggcgg 168 >gb|AY109584.1| Zea mays CL2436_1 mRNA sequence Length = 1746 Score = 595 bits (300), Expect = e-166 Identities = 615/721 (85%) Strand = Plus / Plus Query: 239 gacgacggctcggcccgcgggcgcgtccagccccggttctccatcggttcgtctttcttc 298 ||||||| |||||| ||||| || |||||| ||||||||||||| || | ||||| Sbjct: 719 gacgacgactcggctcgcggacggagccagccgcggttctccatcgactctcccttcttt 778 Query: 299 gccgctgccagaggtttttcttcgactgaaacgcttgtaccaaggaatgaagatgctggc 358 | ||||||||| ||||| ||||| |||||||| |||| |||||||| ||||||| ||| Sbjct: 779 gtcgctgccaggggtttctcttctactgaaacagttgtcccaaggaaccaagatgcgggc 838 Query: 359 ttggcggaactcccagcaactgtggctgcagtgaagaatcctgacccaaaagtgctttat 418 | || || |||||||||||||||||||| |||||||||||| |||| || ||| ||||| Sbjct: 839 ctagctgacctcccagcaactgtggctgctgtgaagaatcctaaccctaaggtggtttat 898 Query: 419 gacgagtacaaccatgagaggtatgctccgggagatcccagcaaaagggccttcgcctac 478 || |||||||||||||| || ||| |||| |||||||||||||| | ||||| || ||| Sbjct: 899 gatgagtacaaccatgaaagatatcctcctggagatcccagcaagcgtgcctttgcatac 958 Query: 479 tttgttctaagtggtgggagattcatatatgcatcactgctgcgtctcctcatcctgaag 538 ||||| || ||||||||||| |||||||||||||||||||||||||| ||| | |||||| Sbjct: 959 tttgtcctgagtggtgggaggttcatatatgcatcactgctgcgtcttctcgtactgaag 1018 Query: 539 tttgtcttgagtatgtcagccagtaaagatgtgcttgcgcttgcgtccattgaggttgat 598 |||||| || |||||| || || ||||||||||| ||||| || ||||||| || Sbjct: 1019 tttgtcctgnnncagtcagcaagcaaggatgtgcttgcccttgcttcacttgaggtggac 1078 Query: 599 ctgtccagcatcgaacctggcagcacggtgactgtgaagtggcgtggaaagccagtcttt 658 || ||||||||||| || || | ||| ||||| |||||||||||||||||||||||||| Sbjct: 1079 ctctccagcatcgagccagggaccacagtgaccgtgaagtggcgtggaaagccagtcttc 1138 Query: 659 atcaggcgacggacagaggatgacatcaagctggccaacagcgtgaatgttgcatccctc 718 |||||||| ||||||||||||||||||||||| |||||||| ||| |||| |||||||| Sbjct: 1139 atcaggcgtcggacagaggatgacatcaagcttgccaacagtgtggatgtggcatccctg 1198 Query: 719 cgccacccgcagcaggacgcggagcgtgtgaagaacccagagtggctggtggtaatcggt 778 |||||||| ||||||| || ||||||||||||||||| |||||||||||||| || || Sbjct: 1199 cgccacccagagcaggatgcagagcgtgtgaagaaccctgagtggctggtggtcattggc 1258 Query: 779 gtctgcacacatcttggttgcattcctctccccaatgctggtgacttcggcggctggttc 838 || ||||| || || || ||||| || || || ||||| || ||||| |||||||||||| Sbjct: 1259 gtgtgcacgcacctcggctgcatcccactacctaatgccggagactttggcggctggttc 1318 Query: 839 tgcccatgccatggttcccactacgacatatccggaagaatccgcaagggccctgccccg 898 ||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||| Sbjct: 1319 tgcccatgccatggttcccactatgacatttccgggaggatccgcaagggccctgcgccg 1378 Query: 899 ttcaacctcgaggtccccacctacagtttcctggaggagaataagctgctcataggctaa 958 ||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||| Sbjct: 1379 ttcaacctcgaggtccctacctacagtttcttggaggagaacaaactgctcataggctaa 1438 Query: 959 g 959 | Sbjct: 1439 g 1439 >gb|BT018238.1| Zea mays clone EL01N0563B05.c mRNA sequence Length = 971 Score = 555 bits (280), Expect = e-154 Identities = 565/660 (85%) Strand = Plus / Plus Query: 303 ctgccagaggtttttcttcgactgaaacgcttgtaccaaggaatgaagatgctggcttgg 362 ||||||| ||||| |||||||||||||| ||||| ||| | || ||||||||||| | | Sbjct: 131 ctgccaggggtttctcttcgactgaaacacttgtcccaggaaaccaagatgctggcctag 190 Query: 363 cggaactcccagcaactgtggctgcagtgaagaatcctgacccaaaagtgctttatgacg 422 | || |||||||||||||||||||| |||||||||||| |||| || ||| ||||||| | Sbjct: 191 ctgacctcccagcaactgtggctgctgtgaagaatcctaaccctaaggtggtttatgatg 250 Query: 423 agtacaaccatgagaggtatgctccgggagatcccagcaaaagggccttcgcctactttg 482 ||||||| ||||| || ||| |||| |||||||||||||| | || || || ||||||| Sbjct: 251 agtacaatcatgaaagatatcctcctggagatcccagcaagcgtgcatttgcttactttg 310 Query: 483 ttctaagtggtgggagattcatatatgcatcactgctgcgtctcctcatcctgaagtttg 542 | || ||||||||||| |||||||||||||||||| ||||||||||| | ||||||||| Sbjct: 311 tcctgagtggtgggaggttcatatatgcatcactgttgcgtctcctcgtattgaagtttg 370 Query: 543 tcttgagtatgtcagccagtaaagatgtgcttgcgcttgcgtccattgaggttgatctgt 602 || |||| |||||||| ||||| || |||||||| ||||| || | ||||| || || | Sbjct: 371 tcctgagcatgtcagcaagtaaggacgtgcttgcccttgcttcactcgaggtggacctct 430 Query: 603 ccagcatcgaacctggcagcacggtgactgtgaagtggcgtggaaagccagtctttatca 662 ||||||| || || || | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 431 ccagcattgagccagggaccacggtgactgtgaagtggcgtggaaagccagtcttcatca 490 Query: 663 ggcgacggacagaggatgacatcaagctggccaacagcgtgaatgttgcatccctccgcc 722 | || ||||| || || ||||||||||| |||||||| ||| |||| |||||||| |||| Sbjct: 491 gacgccggacggacgacgacatcaagcttgccaacagtgtggatgtggcatccctgcgcc 550 Query: 723 acccgcagcaggacgcggagcgtgtgaagaacccagagtggctggtggtaatcggtgtct 782 |||| ||||||| || |||||||||||||| || |||||||||||||| || || || | Sbjct: 551 acccagagcaggatgcagagcgtgtgaagaatcccgagtggctggtggtcattggcgtgt 610 Query: 783 gcacacatcttggttgcattcctctccccaatgctggtgacttcggcggctggttctgcc 842 |||| || || || ||||| || || || || || || ||||| |||||||||||||||| Sbjct: 611 gcactcacctcggctgcatcccactaccgaacgccggagactttggcggctggttctgcc 670 Query: 843 catgccatggttcccactacgacatatccggaagaatccgcaagggccctgccccgttca 902 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 671 catgccatggttcccactacgacatatccgggaggatccgcaagggccctgcgccgttca 730 Query: 903 acctcgaggtccccacctacagtttcctggaggagaataagctgctcataggctaagagc 962 ||||||||||||| |||||||||||| |||||||||| || ||||||||||| ||||||| Sbjct: 731 acctcgaggtcccgacctacagtttcttggaggagaacaaactgctcataggttaagagc 790 >gb|BT017520.1| Zea mays clone EL01N0421A02.c mRNA sequence Length = 1172 Score = 511 bits (258), Expect = e-141 Identities = 558/658 (84%) Strand = Plus / Plus Query: 303 ctgccagaggtttttcttcgactgaaacgcttgtaccaaggaatgaagatgctggcttgg 362 ||||||| ||||| |||||||||||||| ||||| ||| | || ||||||||||| | | Sbjct: 243 ctgccaggggtttctcttcgactgaaacacttgtcccaggaaaccaagatgctggcctag 302 Query: 363 cggaactcccagcaactgtggctgcagtgaagaatcctgacccaaaagtgctttatgacg 422 | || |||||||||||||||||||| |||||||||||| |||| || ||| ||||||| | Sbjct: 303 ctgacctcccagcaactgtggctgctgtgaagaatcctaaccctaaggtggtttatgatg 362 Query: 423 agtacaaccatgagaggtatgctccgggagatcccagcaaaagggccttcgcctactttg 482 ||||||| ||||| || ||| |||| |||||||||||||| | || || || ||||||| Sbjct: 363 agtacaatcatgaaagatatcctcctggagatcccagcaagcgtgcatttgcttactttg 422 Query: 483 ttctaagtggtgggagattcatatatgcatcactgctgcgtctcctcatcctgaagtttg 542 | || ||||||||||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 423 tcctgagtggtgggaggctcatatatgcatcactgctgcgtctcctcgtattgaagtttg 482 Query: 543 tcttgagtatgtcagccagtaaagatgtgcttgcgcttgcgtccattgaggttgatctgt 602 | |||| ||||||| ||||| || |||||||| ||||| || | ||||| || || | Sbjct: 483 ccctgagcatgtcaggaagtaaggacgtgcttgcccttgcttcactcgaggtggacctct 542 Query: 603 ccagcatcgaacctggcagcacggtgactgtgaagtggcgtggaaagccagtctttatca 662 |||||| || || || | |||||||||||||||||||||||||||||||||||| |||| Sbjct: 543 gcagcattgagccagggaccacggtgactgtgaagtggcgtggaaagccagtcttcatca 602 Query: 663 ggcgacggacagaggatgacatcaagctggccaacagcgtgaatgttgcatccctccgcc 722 | || ||||| || || || ||||||| |||||||| ||| |||| |||||||| |||| Sbjct: 603 gacgccggacggacgactacttcaagcttgccaacagtgtggatgtggcatccctgcgcc 662 Query: 723 acccgcagcaggacgcggagcgtgtgaagaacccagagtggctggtggtaatcggtgtct 782 |||| ||||||| || ||||||||||||| || |||||||||||||| || || || | Sbjct: 663 acccagagcaggatgcatagcgtgtgaagaatcccgagtggctggtggtcattggcgtgt 722 Query: 783 gcacacatcttggttgcattcctctccccaatgctggtgacttcggcggctggttctgcc 842 |||| || || |||||||| || || || || || || ||||| |||||||||||||||| Sbjct: 723 gcactcacctcggttgcatcccactaccgaacgccggagactttggcggctggttctgcc 782 Query: 843 catgccatggttcccactacgacatatccggaagaatccgcaagggccctgccccgttca 902 |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 783 catgccatggttcccactactacatatccgggaggatccgcaagggccctgccccgttca 842 Query: 903 acctcgaggtccccacctacagtttcctggaggagaataagctgctcataggctaaga 960 ||||||||||||| |||||||||||| |||||||||| || ||||||||||| ||||| Sbjct: 843 acctcgaggtcccgacctacagtttcttggaggagaacaaactgctcataggttaaga 900 >ref|NM_001059207.1| Oryza sativa (japonica cultivar-group) Os04g0398500 (Os04g0398500) mRNA, complete cds Length = 1242 Score = 509 bits (257), Expect = e-141 Identities = 590/701 (84%) Strand = Plus / Plus Query: 263 gtccagccccggttctccatcggttcgtctttcttcgccgctgccagaggtttttcttcg 322 |||||||| ||||||||||||| || | ||||||||||| |||||||| |||||||| Sbjct: 271 gtccagccgcggttctccatcgagtccccgttcttcgccgccgccagagggttttcttca 330 Query: 323 actgaaacgcttgtaccaaggaatgaagatgctggcttggcggaactcccagcaactgtg 382 ||||||| ||||| |||||||| ||||| |||||||||| ||||| || ||||| || Sbjct: 331 tctgaaacacttgttccaaggaaccaagatactggcttggctgaactacctgcaaccgtt 390 Query: 383 gctgcagtgaagaatcctgacccaaaagtgctttatgacgagtacaaccatgagaggtat 442 |||||| |||||||||| ||||||| ||| | || || |||||||||||||||||| || Sbjct: 391 gctgcactgaagaatcccaacccaaaggtggtgtacgatgagtacaaccatgagaggcat 450 Query: 443 gctccgggagatcccagcaaaagggccttcgcctactttgttctaagtggtgggagattc 502 || || || ||||||||||| | || || || ||||||||||||||||||||||||||| Sbjct: 451 gcacctggggatcccagcaagcgtgcatttgcttactttgttctaagtggtgggagattc 510 Query: 503 atatatgcatcactgctgcgtctcctcatcctgaagtttgtcttgagtatgtcagccagt 562 || |||||||| ||||||| |||||| | |||| || || |||| ||||| || ||| Sbjct: 511 atctatgcatcgttgctgcggctcctcgtattgaaattcgtgctgagcatgtctgcaagt 570 Query: 563 aaagatgtgcttgcgcttgcgtccattgaggttgatctgtccagcatcgaacctggcagc 622 || || |||||||||||||| ||| | ||||| ||||| || ||||| || ||||| | | Sbjct: 571 aaggacgtgcttgcgcttgcttccctggaggtggatctctcaagcattgagcctggtacc 630 Query: 623 acggtgactgtgaagtggcgtggaaagccagtctttatcaggcgacggacagaggatgac 682 || ||||| |||||||||||||| |||||||| || ||||| | |||||||||| ||| Sbjct: 631 acagtgacggtgaagtggcgtgggaagccagttttcatcagaaggaggacagaggacgac 690 Query: 683 atcaagctggccaacagcgtgaatgttgcatccctccgccacccgcagcaggacgcggag 742 || ||||||||| |||||| | |||| ||||| ||||| || ||||||||||| ||| Sbjct: 691 atagcgctggccaatagcgtggacgttgggtccctgcgccatccccagcaggacgcagag 750 Query: 743 cgtgtgaagaacccagagtggctggtggtaatcggtgtctgcacacatcttggttgcatt 802 ||||||||||||||||||||||| ||||| || || |||||||| || |||||||||||| Sbjct: 751 cgtgtgaagaacccagagtggctagtggtcattggcgtctgcacccaccttggttgcatt 810 Query: 803 cctctccccaatgctggtgacttcggcggctggttctgcccatgccatggttcccactac 862 ||||||||||||||||| || ||||| || ||||||||||| |||||||| ||||||||| Sbjct: 811 cctctccccaatgctggagatttcggaggttggttctgcccgtgccatggctcccactac 870 Query: 863 gacatatccggaagaatccgcaagggccctgccccgttcaacctcgaggtccccacctac 922 ||||| || || || || ||||||||||| || || |||||||| |||||||| |||||| Sbjct: 871 gacatctctggcaggattcgcaagggccccgctccattcaacctggaggtccctacctac 930 Query: 923 agtttcctggaggagaataagctgctcataggctaagagcc 963 |||||| |||||||||| ||||| ||||||||||||||||| Sbjct: 931 agtttcttggaggagaacaagctcctcataggctaagagcc 971