BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002a23 (959 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT832300.1| Oryza sativa (indica cultivar-group) cDNA clone:... 690 0.0 ref|NM_001049240.1| Oryza sativa (japonica cultivar-group) Os01g... 690 0.0 dbj|AK071543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 690 0.0 gb|AY108313.1| Zea mays PCO123810 mRNA sequence 363 9e-97 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 325 2e-85 >emb|CT832300.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021B02, full insert sequence Length = 1095 Score = 690 bits (348), Expect = 0.0 Identities = 512/566 (90%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 255 tggggacggtgaactggggaaccgccaccctcgtcggcgtcttcgccgggctgctctacg 314 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 329 tggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacg 388 Query: 315 gcgggagcaaggaggctagcgcgtccgtcagtaaggatgcagaagcgatgttgaagatgg 374 |||||||||||||||| ||||| || ||||| || || || |||| |||||||||||||| Sbjct: 389 gcgggagcaaggaggccagcgcctctgtcagcaaagacgctgaagtgatgttgaagatgg 448 Query: 375 gaaacaccacagacaagcgcgaacagtatagattgatgagagatgcaatggaaaaaaggt 434 | | ||||||||||||||| || ||||||||||||||||||||||||||||| ||||| | Sbjct: 449 ggagcaccacagacaagcgtgagcagtatagattgatgagagatgcaatggagaaaagat 508 Query: 435 tcatccgggttgccaaaggctcactagttggtggtattcgccttgggatgtttactgcaa 494 ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| Sbjct: 509 tcatccgggttgccaaaggatcgctagttggtggtgttcgccttgggatgtttactgcaa 568 Query: 495 ctttctttggcatacagaaccttcttattgagaaccgtggggtacacgatgtatttaaca 554 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| | Sbjct: 569 ctttctttggcatacagaaccttcttattgagaaacgtggggtgcatgatgtatttaata 628 Query: 555 ttgctggagctggctcggctaccgcggctgctttcgggcttatattgccaggttcaccaa 614 | |||||||||||||||||||| || ||||| || || |||||||||||||||||||||| Sbjct: 629 tagctggagctggctcggctactgcagctgcatttggacttatattgccaggttcaccaa 688 Query: 615 tgtggcgtgcaagaaatgtattggttggttctgctcttggtgctggaatctgctttcccc 674 ||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||| Sbjct: 689 tgtggcgtgcaaggaatgtattggttggatcagctcttggtgctggagtctgctttcccc 748 Query: 675 ttggttggatacagttgaagcttgcagaaaaggcaaatcttgagattgcaaactcgaaat 734 |||||||||||||||||||||| ||||| || || ||||||||||| |||| |||||| Sbjct: 749 ttggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaac 808 Query: 735 catcgtcagatttggcagaggaacaagggaatcaaagccgtgtgggtgctgctatagaac 794 || ||||||||| ||||||||||| ||||||||| | || ||||| |||||||||| Sbjct: 809 ca---acagatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaac 865 Query: 795 gacttgagcgcagcctgaagaagtaa 820 |||||| ||||||||| ||||||||| Sbjct: 866 gacttgggcgcagcctaaagaagtaa 891 >ref|NM_001049240.1| Oryza sativa (japonica cultivar-group) Os01g0271000 (Os01g0271000) mRNA, complete cds Length = 1063 Score = 690 bits (348), Expect = 0.0 Identities = 512/566 (90%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 255 tggggacggtgaactggggaaccgccaccctcgtcggcgtcttcgccgggctgctctacg 314 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 269 tggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacg 328 Query: 315 gcgggagcaaggaggctagcgcgtccgtcagtaaggatgcagaagcgatgttgaagatgg 374 |||||||||||||||| ||||| || ||||| || || || |||| |||||||||||||| Sbjct: 329 gcgggagcaaggaggccagcgcctctgtcagcaaagacgctgaagtgatgttgaagatgg 388 Query: 375 gaaacaccacagacaagcgcgaacagtatagattgatgagagatgcaatggaaaaaaggt 434 | | ||||||||||||||| || ||||||||||||||||||||||||||||| ||||| | Sbjct: 389 ggagcaccacagacaagcgtgagcagtatagattgatgagagatgcaatggagaaaagat 448 Query: 435 tcatccgggttgccaaaggctcactagttggtggtattcgccttgggatgtttactgcaa 494 ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| Sbjct: 449 tcatccgggttgccaaaggatcgctagttggtggtgttcgccttgggatgtttactgcaa 508 Query: 495 ctttctttggcatacagaaccttcttattgagaaccgtggggtacacgatgtatttaaca 554 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| | Sbjct: 509 ctttctttggcatacagaaccttcttattgagaaacgtggggtgcatgatgtatttaata 568 Query: 555 ttgctggagctggctcggctaccgcggctgctttcgggcttatattgccaggttcaccaa 614 | |||||||||||||||||||| || ||||| || || |||||||||||||||||||||| Sbjct: 569 tagctggagctggctcggctactgcagctgcatttggacttatattgccaggttcaccaa 628 Query: 615 tgtggcgtgcaagaaatgtattggttggttctgctcttggtgctggaatctgctttcccc 674 ||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||| Sbjct: 629 tgtggcgtgcaaggaatgtattggttggatcagctcttggtgctggagtctgctttcccc 688 Query: 675 ttggttggatacagttgaagcttgcagaaaaggcaaatcttgagattgcaaactcgaaat 734 |||||||||||||||||||||| ||||| || || ||||||||||| |||| |||||| Sbjct: 689 ttggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaac 748 Query: 735 catcgtcagatttggcagaggaacaagggaatcaaagccgtgtgggtgctgctatagaac 794 || ||||||||| ||||||||||| ||||||||| | || ||||| |||||||||| Sbjct: 749 ca---acagatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaac 805 Query: 795 gacttgagcgcagcctgaagaagtaa 820 |||||| ||||||||| ||||||||| Sbjct: 806 gacttgggcgcagcctaaagaagtaa 831 >dbj|AK071543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100F02, full insert sequence Length = 1063 Score = 690 bits (348), Expect = 0.0 Identities = 512/566 (90%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 255 tggggacggtgaactggggaaccgccaccctcgtcggcgtcttcgccgggctgctctacg 314 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 270 tggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacg 329 Query: 315 gcgggagcaaggaggctagcgcgtccgtcagtaaggatgcagaagcgatgttgaagatgg 374 |||||||||||||||| ||||| || ||||| || || || |||| |||||||||||||| Sbjct: 330 gcgggagcaaggaggccagcgcctctgtcagcaaagacgctgaagtgatgttgaagatgg 389 Query: 375 gaaacaccacagacaagcgcgaacagtatagattgatgagagatgcaatggaaaaaaggt 434 | | ||||||||||||||| || ||||||||||||||||||||||||||||| ||||| | Sbjct: 390 ggagcaccacagacaagcgtgagcagtatagattgatgagagatgcaatggagaaaagat 449 Query: 435 tcatccgggttgccaaaggctcactagttggtggtattcgccttgggatgtttactgcaa 494 ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| Sbjct: 450 tcatccgggttgccaaaggatcgctagttggtggtgttcgccttgggatgtttactgcaa 509 Query: 495 ctttctttggcatacagaaccttcttattgagaaccgtggggtacacgatgtatttaaca 554 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| | Sbjct: 510 ctttctttggcatacagaaccttcttattgagaaacgtggggtgcatgatgtatttaata 569 Query: 555 ttgctggagctggctcggctaccgcggctgctttcgggcttatattgccaggttcaccaa 614 | |||||||||||||||||||| || ||||| || || |||||||||||||||||||||| Sbjct: 570 tagctggagctggctcggctactgcagctgcatttggacttatattgccaggttcaccaa 629 Query: 615 tgtggcgtgcaagaaatgtattggttggttctgctcttggtgctggaatctgctttcccc 674 ||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||| Sbjct: 630 tgtggcgtgcaaggaatgtattggttggatcagctcttggtgctggagtctgctttcccc 689 Query: 675 ttggttggatacagttgaagcttgcagaaaaggcaaatcttgagattgcaaactcgaaat 734 |||||||||||||||||||||| ||||| || || ||||||||||| |||| |||||| Sbjct: 690 ttggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaac 749 Query: 735 catcgtcagatttggcagaggaacaagggaatcaaagccgtgtgggtgctgctatagaac 794 || ||||||||| ||||||||||| ||||||||| | || ||||| |||||||||| Sbjct: 750 ca---acagatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaac 806 Query: 795 gacttgagcgcagcctgaagaagtaa 820 |||||| ||||||||| ||||||||| Sbjct: 807 gacttgggcgcagcctaaagaagtaa 832 >gb|AY108313.1| Zea mays PCO123810 mRNA sequence Length = 736 Score = 363 bits (183), Expect = 9e-97 Identities = 339/391 (86%) Strand = Plus / Plus Query: 428 aaaaggttcatccgggttgccaaaggctcactagttggtggtattcgccttgggatgttt 487 ||||||||||| |||||||||||||| |||||||| || ||| |||| || ||||||||| Sbjct: 10 aaaaggttcattcgggttgccaaaggttcactagtcgggggtgttcggctggggatgttt 69 Query: 488 actgcaactttctttggcatacagaaccttcttattgagaaccgtggggtacacgatgta 547 ||||| ||||||||||||||||||||||||||||| || | ||||| ||||| |||||| Sbjct: 70 actgcgactttctttggcatacagaaccttcttatcgatactcgtggagtacatgatgta 129 Query: 548 tttaacattgctggagctggctcggctaccgcggctgctttcgggcttatattgccaggt 607 || |||||||| | |||||||| ||||| || |||||||| || |||||||||||||| Sbjct: 130 ttcaacattgccgctgctggctctgctactgcagctgcttttggccttatattgccaggg 189 Query: 608 tcaccaatgtggcgtgcaagaaatgtattggttggttctgctcttggtgctggaatctgc 667 ||| |||||||||||||| ||||||||||| || ||||||||||||||||| |||||| Sbjct: 190 tcaatgatgtggcgtgcaaggaatgtattggtgggatctgctcttggtgctggcatctgc 249 Query: 668 tttccccttggttggatacagttgaagcttgcagaaaaggcaaatcttgagattgcaaac 727 | ||| ||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 250 tatccacttggctgggtacagttaaagctggcagaaaaggccaatcttgagattgcaaat 309 Query: 728 tcgaaatcatcgtcagatttggcagaggaacaagggaatcaaagccgtgtgggtgctgct 787 || ||| |||| || |||||| |||||| | ||| |||||||||||||||||||||||| Sbjct: 310 tcaaaaccatcatccgatttgacagagggaaaagaaaatcaaagccgtgtgggtgctgct 369 Query: 788 atagaacgacttgagcgcagcctgaagaagt 818 || |||||||||||| | || |||||||||| Sbjct: 370 atcgaacgacttgagggtagtctgaagaagt 400 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 325 bits (164), Expect = 2e-85 Identities = 224/244 (91%) Strand = Plus / Plus Query: 356 gaagcgatgttgaagatgggaaacaccacagacaagcgcgaacagtatagattgatgaga 415 |||| ||||||||||||||| | ||||||||||||||| || |||||||||||||||||| Sbjct: 9370508 gaagtgatgttgaagatggggagcaccacagacaagcgtgagcagtatagattgatgaga 9370567 Query: 416 gatgcaatggaaaaaaggttcatccgggttgccaaaggctcactagttggtggtattcgc 475 ||||||||||| ||||| |||||||||||||||||||| || |||||||||||| ||||| Sbjct: 9370568 gatgcaatggagaaaagattcatccgggttgccaaaggatcgctagttggtggtgttcgc 9370627 Query: 476 cttgggatgtttactgcaactttctttggcatacagaaccttcttattgagaaccgtggg 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9370628 cttgggatgtttactgcaactttctttggcatacagaaccttcttattgagaaacgtggg 9370687 Query: 536 gtacacgatgtatttaacattgctggagctggctcggctaccgcggctgctttcgggctt 595 || || ||||||||||| || |||||||||||||||||||| || ||||| || || ||| Sbjct: 9370688 gtgcatgatgtatttaatatagctggagctggctcggctactgcagctgcatttggactt 9370747 Query: 596 atat 599 |||| Sbjct: 9370748 atat 9370751 Score = 139 bits (70), Expect = 2e-29 Identities = 79/82 (96%) Strand = Plus / Plus Query: 255 tggggacggtgaactggggaaccgccaccctcgtcggcgtcttcgccgggctgctctacg 314 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9369981 tggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacg 9370040 Query: 315 gcgggagcaaggaggctagcgc 336 |||||||||||||||| ||||| Sbjct: 9370041 gcgggagcaaggaggccagcgc 9370062 Score = 127 bits (64), Expect = 9e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 600 tgccaggttcaccaatgtggcgtgcaagaaatgtattggttggttctgctcttggtgctg 659 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 9371553 tgccaggttcaccaatgtggcgtgcaaggaatgtattggttggatcagctcttggtgctg 9371612 Query: 660 gaatctgctttccccttggt 679 || ||||||||||||||||| Sbjct: 9371613 gagtctgctttccccttggt 9371632 Score = 115 bits (58), Expect = 3e-22 Identities = 123/144 (85%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 677 ggttggatacagttgaagcttgcagaaaaggcaaatcttgagattgcaaactcgaaatca 736 |||||||||||||||||||| ||||| || || ||||||||||| |||| |||||| || Sbjct: 9372204 ggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaacca 9372263 Query: 737 tcgtcagatttggcagaggaacaagggaatcaaagccgtgtgggtgctgctatagaacga 796 | |||||||| ||||||||||| ||||||||| | || ||||| |||||||||||| Sbjct: 9372264 ac---agatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaacga 9372320 Query: 797 cttgagcgcagcctgaagaagtaa 820 |||| ||||||||| ||||||||| Sbjct: 9372321 cttgggcgcagcctaaagaagtaa 9372344