BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002a05 (790 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059351.1| Oryza sativa (japonica cultivar-group) Os04g... 1102 0.0 dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1086 0.0 dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ... 902 0.0 gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence 726 0.0 gb|DQ245522.1| Zea mays clone 16675 mRNA sequence 716 0.0 >ref|NM_001059351.1| Oryza sativa (japonica cultivar-group) Os04g0430100 (Os04g0430100) mRNA, complete cds Length = 899 Score = 1102 bits (556), Expect = 0.0 Identities = 695/738 (94%), Gaps = 5/738 (0%) Strand = Plus / Plus Query: 56 ggagctcgtctgatccattcgtcgcccaccatgatcatccccaagaagaaccgcaatgag 115 |||||||||| ||||| ||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 63 ggagctcgtccgatccgctcggcgcccgccatgatcatcccgaagaagaaccgcaatgag 122 Query: 116 atctgcaagtacctcttcaaagagggggtgctgtatgccaagaaggactacaacctggcg 175 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123 atctgcaagtacctcttccaagagggagtgctgtatgccaagaaggactacaacctggcg 182 Query: 176 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctgatgcagagcttcaag 235 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 183 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctcatgcagagcttcaag 242 Query: 236 tccaaggaatacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 295 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tccaaggagtacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 302 Query: 296 gatggcattgagcacctgcgcaactacctcaacctgccatctgagatcgtgcctgccacg 355 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 303 gatggcattgagcacctgcgcaactaccttaacctgccatctgagattgtgcctgccaca 362 Query: 356 ctcaagaagtctgccaggccacctggccgcccattcggctctggcccacctggtgaccgc 415 ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 363 ctcaagaagtctgccaggccacctggccgcccatttggttctggcccacctggcgaccgc 422 Query: 416 ccaaggggcccacctcgctttgaaggggacaggccaaggttcggtgacagggatgggtac 475 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 423 ccaaggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtac 482 Query: 476 cgtggcggtcctcgtggtgctcctggagactttggtggtgagaagggtggagctcctgct 535 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 cgtggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgct 542 Query: 536 gagttccagccatccttcaggagctctggtggtagacctggctttggccgtggtggtggt 595 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 543 gagttccagccatcctttaggagctctggtggcagacctggctttggccgtggtggtggc 602 Query: 596 ggcggctttggcgctggcccgacctcttcctcaatggaatgaattcccccaagtttggat 655 || ||||||||||||||||||||||||||||| ||||| |||| | ||| ||||||||| Sbjct: 603 ggaggctttggcgctggcccgacctcttcctcgatggagtgaacttcccgtagtttggat 662 Query: 656 atgatgtttcccttcgcatgaggcgtttaattttgaaggacggtt--attatgtagtagt 713 ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||| Sbjct: 663 atgatgttttccttcgcatgaggcgtttaattttgaaggacagttaaattatgtagcagt 722 Query: 714 gatgtttgctggatcgaccaatgtttgacacatgct--aaatatgctatcttgatacctt 771 ||||||||| ||||||||| || |||||| ||||| |||||||||||||||||||||| Sbjct: 723 gatgtttgcaggatcgaccgctg-ttgacatatgctaaaaatatgctatcttgatacctt 781 Query: 772 ccagtataatagtttttg 789 |||||||||||||||||| Sbjct: 782 ccagtataatagtttttg 799 >dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 1086 bits (548), Expect = 0.0 Identities = 693/738 (93%), Gaps = 5/738 (0%) Strand = Plus / Plus Query: 56 ggagctcgtctgatccattcgtcgcccaccatgatcatccccaagaagaaccgcaatgag 115 |||||||||| ||||| ||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 64 ggagctcgtccgatccgctcggcgcccgccatgatcatcccgaagaagaaccgcaatgag 123 Query: 116 atctgcaagtacctcttcaaagagggggtgctgtatgccaagaaggactacaacctggcg 175 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124 atctgcaagtacctcttccaagagggagtgctgtatgccaagaaggactacaacctggcg 183 Query: 176 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctgatgcagagcttcaag 235 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 184 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctcatgcagagcttcaag 243 Query: 236 tccaaggaatacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 295 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tccaaggagtacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 303 Query: 296 gatggcattgagcacctgcgcaactacctcaacctgccatctgagatcgtgcctgccacg 355 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 304 gatggcattgagcacctgcgcaactaccttaacctgccatctgagattgtgcctgccaca 363 Query: 356 ctcaagaagtctgccaggccacctggccgcccattcggctctggcccacctggtgaccgc 415 ||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 364 ctcgagaagtctgccaggccacctggccgcccatttggttctggcccacctggcgaccgc 423 Query: 416 ccaaggggcccacctcgctttgaaggggacaggccaaggttcggtgacagggatgggtac 475 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 424 ccaaggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtac 483 Query: 476 cgtggcggtcctcgtggtgctcctggagactttggtggtgagaagggtggagctcctgct 535 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 484 cgtggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgct 543 Query: 536 gagttccagccatccttcaggagctctggtggtagacctggctttggccgtggtggtggt 595 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 544 gagttccagccatcctttaggagctctggtggcagacctggctttggccgtggtggtggc 603 Query: 596 ggcggctttggcgctggcccgacctcttcctcaatggaatgaattcccccaagtttggat 655 || ||||||||||||||||||||||||||||| ||||| |||| | ||| ||||||||| Sbjct: 604 ggaggctttggcgctggcccgacctcttcctcgatggagtgaacttcccgtagtttggat 663 Query: 656 atgatgtttcccttcgcatgaggcgtttaattttgaaggacggtt--attatgtagtagt 713 ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||| Sbjct: 664 atgatgttttccttcgcatgaggcgtttaattttgaaggacagttaaattatgtagcagt 723 Query: 714 gatgtttgctggatcgaccaatgtttgacacatgct--aaatatgctatcttgatacctt 771 ||||||||| ||||||||| || ||| || ||||| |||||||||||||||||||||| Sbjct: 724 gatgtttgcaggatcgaccgctg-ttggcatatgctaaaaatatgctatcttgatacctt 782 Query: 772 ccagtataatagtttttg 789 |||||||||||||||||| Sbjct: 783 ccagtataatagtttttg 800 >dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 902 bits (455), Expect = 0.0 Identities = 551/583 (94%) Strand = Plus / Plus Query: 56 ggagctcgtctgatccattcgtcgcccaccatgatcatccccaagaagaaccgcaatgag 115 |||||||||| ||||| ||| ||||| ||||||||||||| |||||||||||||||||| Sbjct: 62 ggagctcgtccgatccgctcggcgcccgccatgatcatcccgaagaagaaccgcaatgag 121 Query: 116 atctgcaagtacctcttcaaagagggggtgctgtatgccaagaaggactacaacctggcg 175 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122 atctgcaagtacctcttccaagagggagtgctgtatgccaagaaggactacaacctggcg 181 Query: 176 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctgatgcagagcttcaag 235 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 182 aagcacccgcagatcgatgtgccgaacctgcaggtgatcaagttcatgcagagcttcaag 241 Query: 236 tccaaggaatacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 295 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tccaaggagtacgtcagggagaccttctcctggcagtactactactggtacctcaccaac 301 Query: 296 gatggcattgagcacctgcgcaactacctcaacctgccatctgagatcgtgcctgccacg 355 ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct: 302 gatggcattgagcacctgctcaactaccttaacctgccatctgagattgtgcctgccaca 361 Query: 356 ctcaagaagtctgccaggccacctggccgcccattcggctctggcccacctggtgaccgc 415 |||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| Sbjct: 362 ctcaagaagtctgccaggccacctggtcgcccatttggttctggcccacctggcgaccgt 421 Query: 416 ccaaggggcccacctcgctttgaaggggacaggccaaggttcggtgacagggatgggtac 475 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 422 ccaaggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtac 481 Query: 476 cgtggcggtcctcgtggtgctcctggagactttggtggtgagaagggtggagctcctgct 535 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 482 cgtggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgct 541 Query: 536 gagttccagccatccttcaggagctctggtggtagacctggctttggccgtggtggtggt 595 |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 542 gagttccaaccatcctttaggagctctggtggcagacctggctttggccgtggtggtggc 601 Query: 596 ggcggctttggcgctggcccgacctcttcctcaatggaatgaa 638 || ||||||||||||||||||||||||||||| ||||| |||| Sbjct: 602 ggaggctttggcgctggcccgacctcttcctcgatggagtgaa 644 >gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 726 bits (366), Expect = 0.0 Identities = 512/560 (91%), Gaps = 3/560 (0%) Strand = Plus / Minus Query: 79 gcccaccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaaga 138 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 799 gcccaccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaagga 740 Query: 139 gggggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcc 198 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 739 gggcgtgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcc 680 Query: 199 gaacctgcaggtgatcaagctgatgcagagcttcaagtccaaggaatacgtcagggagac 258 ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 679 caacctccaggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagac 620 Query: 259 cttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 619 cttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctacgcaa 560 Query: 319 ctacctcaacctgccatctgagatcgtgcctgccacgctcaagaagtctgccaggccacc 378 |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 ctacctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaggccact 500 Query: 379 tggccgcccattcggctctggcccacctggtgaccgcccaaggggcccacctcgctttga 438 ||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 499 gggccgtccatttggctctggccctcctggtgaccgcccaaggggccctggtcgttttga 440 Query: 439 aggggacaggccaaggttcggtgacagggatgggtaccgtggcggtcctcgtggtgctcc 498 | ||||| |||||||| || |||||||||| ||||||||| ||||||||||||||||| Sbjct: 439 a---gacagaccaaggtttggagacagggatgagtaccgtggtggtcctcgtggtgctcc 383 Query: 499 tggagactttggtggtgagaagggtggagctcctgctgagttccagccatccttcaggag 558 ||| ||||| ||||| || ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 382 tggtgacttcggtggcgataagagtggagctcctgctgagttccagccatctttcaggag 323 Query: 559 ctctggtggtagacctggctttggccgtggtggtggtggcggctttggcgctggcccgac 618 ||||| | || ||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 322 ttctggcgcgaggcctggctttggccgtggtggtggcagtggctttggcgctggcccgac 263 Query: 619 ctcttcctcaatggaatgaa 638 |||||| || ||||| |||| Sbjct: 262 ctcttcttccatggagtgaa 243 Score = 87.7 bits (44), Expect = 6e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 647 agtttggatatgatgtttcccttcgcatgaggcgtttaattttgaaggacggttattatg 706 |||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 226 agtttggacatgatgtttcccctcccatgaggcgtttaattttgaaggacgattattatg 167 >gb|DQ245522.1| Zea mays clone 16675 mRNA sequence Length = 765 Score = 716 bits (361), Expect = 0.0 Identities = 448/477 (93%) Strand = Plus / Plus Query: 82 caccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaagaggg 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 caccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggaggg 133 Query: 142 ggtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134 cgtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcccaa 193 Query: 202 cctgcaggtgatcaagctgatgcagagcttcaagtccaaggaatacgtcagggagacctt 261 ||| |||||||||||||| ||||||||||| ||||||||||| || || ||||||||||| Sbjct: 194 cctccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttagggagacctt 253 Query: 262 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaacta 321 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 254 ctcctggcagtactactactggtatctcaccaacgatggcattgagcacctacgcaacta 313 Query: 322 cctcaacctgccatctgagatcgtgcctgccacgctcaagaagtctgccaggccacctgg 381 ||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 314 cctgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctgg 373 Query: 382 ccgcccattcggctctggcccacctggtgaccgcccaaggggcccacctcgctttgaagg 441 ||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||| || Sbjct: 374 ccgcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgttttgacgg 433 Query: 442 ggacaggccaaggttcggtgacagggatgggtaccgtggcggtcctcgtggtgctcctgg 501 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 434 cgacaggccaaggtttggtgacagggatgggtaccgtggtggtcctcgtggtgctcctgg 493 Query: 502 agactttggtggtgagaagggtggagctcctgctgagttccagccatccttcaggag 558 ||||||||||| || ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 494 tgactttggtggcgataagagtggagctcctgctgagttccagccatcattcaggag 550 Score = 101 bits (51), Expect = 4e-18 Identities = 121/143 (84%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 572 cctggctttggccgtggtggtggtggcggctttggcgctggcccgacctcttcctcaatg 631 ||||||||||| |||||||| || ||||||| ||||| ||||| |||||||| || ||| Sbjct: 552 cctggctttgggcgtggtggcggcagcggcttcggcgcaggcccaacctcttcttccatg 611 Query: 632 gaatgaa-ttcccccaagtttggatatgatgtttcccttcgcatgaggcgtttaattttg 690 || |||| || ||| ||||||| ||| |||||||||||||||| ||| |||| ||||| Sbjct: 612 gagtgaagttgcccttggtttggacatggtgtttcccttcgcatgtggcctttagttttg 671 Query: 691 aaggacggttattatgtagtagt 713 |||||| ||||||||||| |||| Sbjct: 672 aaggacagttattatgtactagt 694