BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002a03 (741 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:... 291 2e-75 ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g... 291 2e-75 dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 2e-75 gb|DQ244151.1| Zea mays clone 2586 mRNA sequence 250 7e-63 emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein 250 7e-63 >emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022M13, full insert sequence Length = 671 Score = 291 bits (147), Expect = 2e-75 Identities = 367/439 (83%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagatgaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| ||||||||| || ||||||| Sbjct: 48 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 107 Query: 109 tctgcttgctgtcctggctggcaaccccagcccctctgcagacgatttgacgtctattct 168 |||| | || |||||||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 108 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 167 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 168 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 227 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 228 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 287 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccagcggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 288 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 347 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 348 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 407 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 408 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 466 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 467 actttgcgcaggaaactag 485 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 542 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 601 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 602 tacttcactggtgaaccatgcttttgctatc 632 >ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g0191100 (Os01g0191100) mRNA, complete cds Length = 693 Score = 291 bits (147), Expect = 2e-75 Identities = 367/439 (83%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagatgaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| ||||||||| || ||||||| Sbjct: 51 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 110 Query: 109 tctgcttgctgtcctggctggcaaccccagcccctctgcagacgatttgacgtctattct 168 |||| | || |||||||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 111 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 170 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 171 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 230 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 231 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 290 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccagcggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 291 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 350 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 351 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 410 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 411 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 469 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 470 actttgcgcaggaaactag 488 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 291 bits (147), Expect = 2e-75 Identities = 367/439 (83%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 49 ccgcctccgctcctccagctctctccctctcccatccaagatgaagtttgttgctgccta 108 ||||| |||||| || ||||||||| ||||||||||| ||||||||| || ||||||| Sbjct: 51 ccgccgccgctcgtcgggctctctccatctcccatccaggatgaagttcatttctgccta 110 Query: 109 tctgcttgctgtcctggctggcaaccccagcccctctgcagacgatttgacgtctattct 168 |||| | || |||||||||||| |||||||| |||| || |||||||| | ||||| Sbjct: 111 tctgatggcctatctggctggcaactccagccccactgcggaggatttgacaacgattct 170 Query: 169 ggagtcagttggtgttgagattgacagtgtaagggttgaactgctgttgtcccaactgag 228 ||||||||||||| ||| || |||| || || | | ||||| |||||||| ||| |||| Sbjct: 171 ggagtcagttggttgtgaaatcgacaatgcaaagatggaactcctgttgtctcaagtgag 230 Query: 229 tggtaaggacattaatgaggtcattgctgccggtagggagaagtttgcttcagttccatg 288 ||| |||||||| | |||| |||| ||| || ||||||||||||||||||||||||| Sbjct: 231 tggcaaggacatcactgagctcatcgcttgtggcagggagaagtttgcttcagttccatc 290 Query: 289 tggtggtggcggtgtagctgttgcagcagctgctcctaccagcggtggtgctggcgctgc 348 ||||||||| |||||||||||||| || ||||||||| | |||||||||||| | ||| Sbjct: 291 tggtggtggtggtgtagctgttgctgctgctgctcctgctgccggtggtgctggtggtgc 350 Query: 349 tcctgcagctgaatcgaagaaagaagagaaggttgaggagaaggaagagagtgatgatga 408 |||||||||||| ||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 351 tcctgcagctgaggcgaagaaagaagataaggtcgaagagaaggaagaaagtgatgatga 410 Query: 409 catgggcttcagtctgttcgactaagtggtgggggtcttctcttgtatcatcagtatcag 468 ||||||||||||| |||| |||| |||| | | |||| ||||| |||||||| || ||| Sbjct: 411 catgggcttcagtttgtttgactgagtgat-gcggtcacctcttctatcatcaataccag 469 Query: 469 tctttgggcaggaaactag 487 ||||| |||||||||||| Sbjct: 470 actttgcgcaggaaactag 488 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >gb|DQ244151.1| Zea mays clone 2586 mRNA sequence Length = 797 Score = 250 bits (126), Expect = 7e-63 Identities = 290/345 (84%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 88 gatgaagtttgttgctgcctatctgcttgctgtcctggctggcaaccccagcccctctgc 147 ||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| || Sbjct: 174 gatgaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgc 233 Query: 148 agacgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttga 207 ||||||||||| | ||||||||||||||||| ||| |||||| || || | | || Sbjct: 234 tgacgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatgga 293 Query: 208 actgctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtaggga 267 ||| ||| ||||||||||||| ||||||||||| | ||| ||||||| || || ||||| Sbjct: 294 actcctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcaggga 353 Query: 268 gaagtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctac 327 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 354 gaagtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct-- 411 Query: 328 cagcggtggtgctggcgctgctcctgcagctgaatcgaagaaagaagagaaggttgagga 387 | || || || ||||||||||||||||| | ||||||||||||||||| || || Sbjct: 412 ----gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaaga 467 Query: 388 gaaggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 ||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 468 gaaggaagaaagcgatgatgatatgggcttcagcctcttcgacta 512 >emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 250 bits (126), Expect = 7e-63 Identities = 290/345 (84%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 88 gatgaagtttgttgctgcctatctgcttgctgtcctggctggcaaccccagcccctctgc 147 ||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| || Sbjct: 42 gatgaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgc 101 Query: 148 agacgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttga 207 ||||||||||| | ||||||||||||||||| ||| |||||| || || | | || Sbjct: 102 tgacgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatgga 161 Query: 208 actgctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtaggga 267 ||| ||| ||||||||||||| ||||||||||| | ||| ||||||| || || ||||| Sbjct: 162 actcctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcaggga 221 Query: 268 gaagtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctac 327 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 222 gaagtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct-- 279 Query: 328 cagcggtggtgctggcgctgctcctgcagctgaatcgaagaaagaagagaaggttgagga 387 | || || || ||||||||||||||||| | ||||||||||||||||| || || Sbjct: 280 ----gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaaga 335 Query: 388 gaaggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 ||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 336 gaaggaagaaagcgatgatgatatgggcttcagcctcttcgacta 380