BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf333z41 (1007 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051425.1| Oryza sativa (japonica cultivar-group) Os01g... 529 e-147 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 529 e-147 dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic D... 529 e-147 ref|NM_001062205.1| Oryza sativa (japonica cultivar-group) Os05g... 194 5e-46 gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome... 194 5e-46 >ref|NM_001051425.1| Oryza sativa (japonica cultivar-group) Os01g0863800 (Os01g0863800) mRNA, complete cds Length = 735 Score = 529 bits (267), Expect = e-147 Identities = 417/467 (89%), Gaps = 15/467 (3%) Strand = Plus / Plus Query: 240 gcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcggcacgac 299 |||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 184 gcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcggcacgac 243 Query: 300 tgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------ggcgacacg 350 |||||||||||||||||||||| |||||| |||||||||||| | ||||||| Sbjct: 244 tgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgccgacacg 303 Query: 351 gcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcgaccctggc 410 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 304 gccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcgacccggga 363 Query: 411 gcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gagaggcct-- 465 |||||||| |||||||||||||| |||||||| || |||| ||||| | ||||||| Sbjct: 364 gcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcgaggcctcc 423 Query: 466 -tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 524 || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 424 ttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggacttccgggtg 483 Query: 525 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 584 |||||||| |||||||||| ||||||||||||||| ||||||| ||||| ||| ||||| Sbjct: 484 tccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctggaggagatg 543 Query: 585 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 644 ||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 544 ctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggcggcgttc 603 Query: 645 gtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 691 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 604 atcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 650 Score = 117 bits (59), Expect = 9e-23 Identities = 125/147 (85%) Strand = Plus / Plus Query: 69 atggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacacctcg 128 ||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||||||| Sbjct: 1 atggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacacctcg 60 Query: 129 ccgtcaccgcctctctctccggccaccgcgcctgcgtgggcgtggccgtcattcaagcac 188 ||||| ||||||| | | ||||| ||||| ||| |||||| ||||||||| | |||| || Sbjct: 61 ccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaagaac 120 Query: 189 ccaagaacgcagtccttccgcgccgcg 215 ||||| ||||||||||||||||||||| Sbjct: 121 ccaaggacgcagtccttccgcgccgcg 147 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 529 bits (267), Expect = e-147 Identities = 417/467 (89%), Gaps = 15/467 (3%) Strand = Plus / Plus Query: 240 gcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcggcacgac 299 |||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 37374922 gcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcggcacgac 37374981 Query: 300 tgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------ggcgacacg 350 |||||||||||||||||||||| |||||| |||||||||||| | ||||||| Sbjct: 37374982 tgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgccgacacg 37375041 Query: 351 gcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcgaccctggc 410 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 37375042 gccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcgacccggga 37375101 Query: 411 gcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gagaggcct-- 465 |||||||| |||||||||||||| |||||||| || |||| ||||| | ||||||| Sbjct: 37375102 gcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcgaggcctcc 37375161 Query: 466 -tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 524 || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 37375162 ttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggacttccgggtg 37375221 Query: 525 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 584 |||||||| |||||||||| ||||||||||||||| ||||||| ||||| ||| ||||| Sbjct: 37375222 tccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctggaggagatg 37375281 Query: 585 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 644 ||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 37375282 ctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggcggcgttc 37375341 Query: 645 gtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 691 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37375342 atcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 37375388 Score = 125 bits (63), Expect = 4e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 65 accaatggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacac 124 ||||||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||| Sbjct: 37374735 accaatggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacac 37374794 Query: 125 ctcgccgtcaccgcctctctctccggccaccgcgcctgcgtgggcgtggccgtcattcaa 184 ||||||||| ||||||| | | ||||| ||||| ||| |||||| ||||||||| | ||| Sbjct: 37374795 ctcgccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaa 37374854 Query: 185 gcacccaagaacgcagtccttccgcgccgcg 215 | ||||||| ||||||||||||||||||||| Sbjct: 37374855 gaacccaaggacgcagtccttccgcgccgcg 37374885 >dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 529 bits (267), Expect = e-147 Identities = 417/467 (89%), Gaps = 15/467 (3%) Strand = Plus / Plus Query: 240 gcctccatcttcattgactccgccgagtcctccttaacgacttcctccgcgcggcacgac 299 |||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 86956 gcctccatcttcctcgactccgccgagtcctccttcacgacctcctccgcgcggcacgac 87015 Query: 300 tgctccgacagcctctccacggtgtccgaagcgtcggcgggg---------ggcgacacg 350 |||||||||||||||||||||| |||||| |||||||||||| | ||||||| Sbjct: 87016 tgctccgacagcctctccacggcgtccgaggcgtcggcgggggccgaggccgccgacacg 87075 Query: 351 gcggacgacgccattgtgcggggcctccgctcctccgaccggctcctcttcgaccctggc 410 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 87076 gccgacgacgccatcgtgcgcggcctccgctcctccgaccggctcctcttcgacccggga 87135 Query: 411 gcgtcggccacgagctccatactcgaggagaaatcatcgggcgccg---gagaggcct-- 465 |||||||| |||||||||||||| |||||||| || |||| ||||| | ||||||| Sbjct: 87136 gcgtcggcaacgagctccatactggaggagaagtcgtcggacgccgccggcgaggcctcc 87195 Query: 466 -tcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 524 || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 87196 ttcatcggcggcgtggcggtggcgttcgagtcggaggacccgtacgtggacttccgggtg 87255 Query: 525 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 584 |||||||| |||||||||| ||||||||||||||| ||||||| ||||| ||| ||||| Sbjct: 87256 tccatggaggagatggtggtcgcgcacggggtcggcaactggggctggctggaggagatg 87315 Query: 585 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 644 ||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 87316 ctgggatggtacctgcgagccaacggcaaggacacgcacgccgccatattggcggcgttc 87375 Query: 645 gtcgacgtcatcgtcgccatcgccgacccggcccgcgcgtcctgctc 691 ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87376 atcgacgtcatcgtcgccatcgccgacccggccctcgcgtcctgctc 87422 Score = 125 bits (63), Expect = 4e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 65 accaatggtcatccggaagctggccctgagttctttcttccataccaaggccaagcacac 124 ||||||||||||| | | ||||||| |||| || |||||||| | |||||||| | |||| Sbjct: 86769 accaatggtcatcggaaggctggccttgagctccttcttccacaacaaggccagggacac 86828 Query: 125 ctcgccgtcaccgcctctctctccggccaccgcgcctgcgtgggcgtggccgtcattcaa 184 ||||||||| ||||||| | | ||||| ||||| ||| |||||| ||||||||| | ||| Sbjct: 86829 ctcgccgtccccgcctcccgccccggcaaccgcacctccgtgggtgtggccgtcctgcaa 86888 Query: 185 gcacccaagaacgcagtccttccgcgccgcg 215 | ||||||| ||||||||||||||||||||| Sbjct: 86889 gaacccaaggacgcagtccttccgcgccgcg 86919 >ref|NM_001062205.1| Oryza sativa (japonica cultivar-group) Os05g0441400 (Os05g0441400) mRNA, complete cds Length = 1120 Score = 194 bits (98), Expect = 5e-46 Identities = 164/186 (88%) Strand = Plus / Plus Query: 465 ttcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 524 |||| ||||||||| |||||||||||||| |||| ||| ||||||| ||||||||||||| Sbjct: 544 ttcggcggcggcgtcgcggtggcgttcgactcggaggatccgtacgaggacttccgggcg 603 Query: 525 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 584 ||||||| |||||| ||||||||||||| || || |||||||| ||||| ||| ||| Sbjct: 604 tccatggcggagatgctggccgcgcacggcgtgggcgactggggctggctggaggccatg 663 Query: 585 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 644 || ||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 664 ctagggtggtacctccgcgccaacggcaaggagacgcacgccgccatcgtcgcggcgttc 723 Query: 645 gtcgac 650 |||||| Sbjct: 724 gtcgac 729 >gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 194 bits (98), Expect = 5e-46 Identities = 164/186 (88%) Strand = Plus / Minus Query: 465 ttcgtcggcggcgtggcggtggcgttcgagtcggcggacccgtacgtggacttccgggcg 524 |||| ||||||||| |||||||||||||| |||| ||| ||||||| ||||||||||||| Sbjct: 19679 ttcggcggcggcgtcgcggtggcgttcgactcggaggatccgtacgaggacttccgggcg 19620 Query: 525 tccatggatgagatggtggccgcgcacggggtcggggactggggttggctcgagaagatg 584 ||||||| |||||| ||||||||||||| || || |||||||| ||||| ||| ||| Sbjct: 19619 tccatggcggagatgctggccgcgcacggcgtgggcgactggggctggctggaggccatg 19560 Query: 585 ctggggtggtacctgcgcgccaacggcaaggacacgcacggcgccatcgtggcggcgttc 644 || ||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct: 19559 ctagggtggtacctccgcgccaacggcaaggagacgcacgccgccatcgtcgcggcgttc 19500 Query: 645 gtcgac 650 |||||| Sbjct: 19499 gtcgac 19494