BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf061g01 (783 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049011.1| Oryza sativa (japonica cultivar-group) Os01g... 571 e-159 dbj|AK061358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 563 e-157 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 400 e-108 dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 400 e-108 gb|AY110530.1| Zea mays CL17960_1 mRNA sequence 355 2e-94 >ref|NM_001049011.1| Oryza sativa (japonica cultivar-group) Os01g0228300 (Os01g0228300) mRNA, complete cds Length = 991 Score = 571 bits (288), Expect = e-159 Identities = 447/500 (89%) Strand = Plus / Plus Query: 177 tcccgaggataaagataaagagttcaaaattgattggaagagggtgggcatcactagttc 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 226 tcccgaggataaagataaagagttcaaaattgattggaagagggtgggcatcacaagctc 285 Query: 237 atttggatttgcttttgttggacctgttggacattactggtatgaatacttggatcgttt 296 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 286 atttggatttgcttttgttggaccagttggacattactggtatgaatacttggatcgctt 345 Query: 297 catccgtcggagatatcagcctagtacattcaaatttgttgcctcaaaagttgctgcaga 356 ||||| ||||||| ||||||| || |||||||||||||| |||||||||||||| || Sbjct: 346 catcctgaggagataccagcctaagaccttcaaatttgttgcgtcaaaagttgctgcgga 405 Query: 357 tggtctcctctttggaccattagatcttctcttgttcttctcgtatgtgggtctcgcttc 416 ||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||| || || Sbjct: 406 tggtctcctatttggaccagtagatcttctcttgttcttctcatatgttggtcttgcatc 465 Query: 417 tggaaggagtgtggagcaggtgaaggatgacgtgaaaagggattttgttcctgctctagt 476 ||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||||| Sbjct: 466 aggaaggagtgtagagcaggtgaaggatgatgtgaagagggacttcattcctgctctagt 525 Query: 477 attaggaggaaccatctggccagccgtgcaaattgcaaacttccgcttcatccccgtgag 536 |||| |||||||||||||||||||||||||| ||||| ||||||||||| || ||| | Sbjct: 526 tctagggggaaccatctggccagccgtgcaaatcgcaaatttccgcttcattcctgtgcg 585 Query: 537 gtatcaacttctttatgtgaacttgttctgcctcttggacagttgtttcttatcatggat 596 ||||| || ||||| |||||| ||||||||||||| |||||||| ||||| || ||||| Sbjct: 586 atatcagctcctttacgtgaacctgttctgcctcttagacagttgcttcttgtcgtggat 645 Query: 597 tgagcaacaaggagatgcatcttggaagcgatggttcacctcgttccagaaaattgaaga 656 || ||||||||||||||| ||||||||| ||||||||| || ||||||||||| |||| Sbjct: 646 cgatcaacaaggagatgcaccttggaagcaatggttcacatcattccagaaaatcgaagg 705 Query: 657 ccagaagagtaaggtttgat 676 ||||||| | |||||||||| Sbjct: 706 ccagaagggcaaggtttgat 725 Score = 216 bits (109), Expect = 1e-52 Identities = 130/137 (94%) Strand = Plus / Plus Query: 18 cgtggggatgcggcggctatggcgatggtaccagcagtgcctggcctcgtaccccgtgcg 77 |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 49 cgtggggatgcggcggctatggcggtggtaccagcagtgcctggccacccaccccgtgcg 108 Query: 78 gacgcaggtggttagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 137 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 cacgcaggtggtcagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 168 Query: 138 cacccgctactccgccc 154 ||||| ||||||||||| Sbjct: 169 cacccactactccgccc 185 >dbj|AK061358.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B09, full insert sequence Length = 991 Score = 563 bits (284), Expect = e-157 Identities = 446/500 (89%) Strand = Plus / Plus Query: 177 tcccgaggataaagataaagagttcaaaattgattggaagagggtgggcatcactagttc 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 226 tcccgaggataaagataaagagttcaaaattgattggaagagggtgggcatcacaagctc 285 Query: 237 atttggatttgcttttgttggacctgttggacattactggtatgaatacttggatcgttt 296 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 286 atttggatttgcttttgttggaccagttggacattactggtatgaatacttggatcgctt 345 Query: 297 catccgtcggagatatcagcctagtacattcaaatttgttgcctcaaaagttgctgcaga 356 ||||| ||||||| ||||||| || |||||||||||||| |||||||||||||| || Sbjct: 346 catcctgaggagataccagcctaagaccttcaaatttgttgcgtcaaaagttgctgcgga 405 Query: 357 tggtctcctctttggaccattagatcttctcttgttcttctcgtatgtgggtctcgcttc 416 ||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||| || || Sbjct: 406 tggtctcctatttggaccagtagatcttctcttgttcttctcatatgttggtcttgcatc 465 Query: 417 tggaaggagtgtggagcaggtgaaggatgacgtgaaaagggattttgttcctgctctagt 476 ||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||||| Sbjct: 466 aggaaggagtgtagagcaggtgaaggatgatgtgaagagggacttcattcctgctctagt 525 Query: 477 attaggaggaaccatctggccagccgtgcaaattgcaaacttccgcttcatccccgtgag 536 |||| |||||||||||||||||||||||||| ||||| ||||||||||| | ||| | Sbjct: 526 tctagggggaaccatctggccagccgtgcaaatcgcaaatttccgcttcatttctgtgcg 585 Query: 537 gtatcaacttctttatgtgaacttgttctgcctcttggacagttgtttcttatcatggat 596 ||||| || ||||| |||||| ||||||||||||| |||||||| ||||| || ||||| Sbjct: 586 atatcagctcctttacgtgaacctgttctgcctcttagacagttgcttcttgtcgtggat 645 Query: 597 tgagcaacaaggagatgcatcttggaagcgatggttcacctcgttccagaaaattgaaga 656 || ||||||||||||||| ||||||||| ||||||||| || ||||||||||| |||| Sbjct: 646 cgatcaacaaggagatgcaccttggaagcaatggttcacatcattccagaaaatcgaagg 705 Query: 657 ccagaagagtaaggtttgat 676 ||||||| | |||||||||| Sbjct: 706 ccagaagggcaaggtttgat 725 Score = 216 bits (109), Expect = 1e-52 Identities = 130/137 (94%) Strand = Plus / Plus Query: 18 cgtggggatgcggcggctatggcgatggtaccagcagtgcctggcctcgtaccccgtgcg 77 |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 49 cgtggggatgcggcggctatggcggtggtaccagcagtgcctggccacccaccccgtgcg 108 Query: 78 gacgcaggtggttagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 137 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 cacgcaggtggtcagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 168 Query: 138 cacccgctactccgccc 154 ||||| ||||||||||| Sbjct: 169 cacccactactccgccc 185 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 275 ggtatgaatacttggatcgtttcatccgtcggagatatcagcctagtacattcaaatttg 334 ||||||||||||||||||| ||||||| ||||||| ||||||| || |||||||||| Sbjct: 7085540 ggtatgaatacttggatcgcttcatcctgaggagataccagcctaagaccttcaaatttg 7085481 Query: 335 ttgcctcaaaagttgctgcagatggtctcctctttggaccattagatcttctcttgttct 394 |||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| Sbjct: 7085480 ttgcgtcaaaagttgctgcggatggtctcctatttggaccagtagatcttctcttgttct 7085421 Query: 395 tctcgtatgtgggtctcgcttctggaaggagtgtggagcaggtgaaggatgacgtgaaaa 454 |||| ||||| ||||| || || ||||||||||| ||||||||||||||||| ||||| | Sbjct: 7085420 tctcatatgttggtcttgcatcaggaaggagtgtagagcaggtgaaggatgatgtgaaga 7085361 Query: 455 gggattttgttcctgctctagtattaggaggaaccatctggccagccgtgcaaattgcaa 514 |||| || ||||||||||||| |||| |||||||||||||||||||||||||| |||| Sbjct: 7085360 gggacttcattcctgctctagttctagggggaaccatctggccagccgtgcaaatcgcaa 7085301 Query: 515 acttccgcttcatccccgtgaggtatcaacttctttatgtgaacttgttctgcctcttgg 574 | ||||||||||| || ||| | ||||| || ||||| |||||| ||||||||||||| | Sbjct: 7085300 atttccgcttcattcctgtgcgatatcagctcctttacgtgaacctgttctgcctcttag 7085241 Query: 575 acagttgtttcttatcatggattgagcaacaaggagatgcatcttggaagcgatggttca 634 ||||||| ||||| || ||||| || ||||||||||||||| ||||||||| |||||||| Sbjct: 7085240 acagttgcttcttgtcgtggatcgatcaacaaggagatgcaccttggaagcaatggttca 7085181 Query: 635 cctcgttccagaaaattgaagaccagaagagtaaggtttgat 676 | || ||||||||||| |||| ||||||| | |||||||||| Sbjct: 7085180 catcattccagaaaatcgaaggccagaagggcaaggtttgat 7085139 Score = 216 bits (109), Expect = 1e-52 Identities = 130/137 (94%) Strand = Plus / Minus Query: 18 cgtggggatgcggcggctatggcgatggtaccagcagtgcctggcctcgtaccccgtgcg 77 |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 7088124 cgtggggatgcggcggctatggcggtggtaccagcagtgcctggccacccaccccgtgcg 7088065 Query: 78 gacgcaggtggttagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 137 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7088064 cacgcaggtggtcagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 7088005 Query: 138 cacccgctactccgccc 154 ||||| ||||||||||| Sbjct: 7088004 cacccactactccgccc 7087988 Score = 167 bits (84), Expect = 8e-38 Identities = 93/96 (96%) Strand = Plus / Minus Query: 182 aggataaagataaagagttcaaaattgattggaagagggtgggcatcactagttcatttg 241 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 7086870 aggataaagataaagagttcaaaattgattggaagagggtgggcatcacaagctcatttg 7086811 Query: 242 gatttgcttttgttggacctgttggacattactggt 277 ||||||||||||||||||| |||||||||||||||| Sbjct: 7086810 gatttgcttttgttggaccagttggacattactggt 7086775 >dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 400 bits (202), Expect = e-108 Identities = 352/402 (87%) Strand = Plus / Minus Query: 275 ggtatgaatacttggatcgtttcatccgtcggagatatcagcctagtacattcaaatttg 334 ||||||||||||||||||| ||||||| ||||||| ||||||| || |||||||||| Sbjct: 73120 ggtatgaatacttggatcgcttcatcctgaggagataccagcctaagaccttcaaatttg 73061 Query: 335 ttgcctcaaaagttgctgcagatggtctcctctttggaccattagatcttctcttgttct 394 |||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| Sbjct: 73060 ttgcgtcaaaagttgctgcggatggtctcctatttggaccagtagatcttctcttgttct 73001 Query: 395 tctcgtatgtgggtctcgcttctggaaggagtgtggagcaggtgaaggatgacgtgaaaa 454 |||| ||||| ||||| || || ||||||||||| ||||||||||||||||| ||||| | Sbjct: 73000 tctcatatgttggtcttgcatcaggaaggagtgtagagcaggtgaaggatgatgtgaaga 72941 Query: 455 gggattttgttcctgctctagtattaggaggaaccatctggccagccgtgcaaattgcaa 514 |||| || ||||||||||||| |||| |||||||||||||||||||||||||| |||| Sbjct: 72940 gggacttcattcctgctctagttctagggggaaccatctggccagccgtgcaaatcgcaa 72881 Query: 515 acttccgcttcatccccgtgaggtatcaacttctttatgtgaacttgttctgcctcttgg 574 | ||||||||||| || ||| | ||||| || ||||| |||||| ||||||||||||| | Sbjct: 72880 atttccgcttcattcctgtgcgatatcagctcctttacgtgaacctgttctgcctcttag 72821 Query: 575 acagttgtttcttatcatggattgagcaacaaggagatgcatcttggaagcgatggttca 634 ||||||| ||||| || ||||| || ||||||||||||||| ||||||||| |||||||| Sbjct: 72820 acagttgcttcttgtcgtggatcgatcaacaaggagatgcaccttggaagcaatggttca 72761 Query: 635 cctcgttccagaaaattgaagaccagaagagtaaggtttgat 676 | || ||||||||||| |||| ||||||| | |||||||||| Sbjct: 72760 catcattccagaaaatcgaaggccagaagggcaaggtttgat 72719 Score = 216 bits (109), Expect = 1e-52 Identities = 130/137 (94%) Strand = Plus / Minus Query: 18 cgtggggatgcggcggctatggcgatggtaccagcagtgcctggcctcgtaccccgtgcg 77 |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 75704 cgtggggatgcggcggctatggcggtggtaccagcagtgcctggccacccaccccgtgcg 75645 Query: 78 gacgcaggtggttagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 137 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75644 cacgcaggtggtcagctccggcatcctctggggcctcggcgacatcggcgcccaggccgt 75585 Query: 138 cacccgctactccgccc 154 ||||| ||||||||||| Sbjct: 75584 cacccactactccgccc 75568 Score = 167 bits (84), Expect = 8e-38 Identities = 93/96 (96%) Strand = Plus / Minus Query: 182 aggataaagataaagagttcaaaattgattggaagagggtgggcatcactagttcatttg 241 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 74450 aggataaagataaagagttcaaaattgattggaagagggtgggcatcacaagctcatttg 74391 Query: 242 gatttgcttttgttggacctgttggacattactggt 277 ||||||||||||||||||| |||||||||||||||| Sbjct: 74390 gatttgcttttgttggaccagttggacattactggt 74355 >gb|AY110530.1| Zea mays CL17960_1 mRNA sequence Length = 849 Score = 355 bits (179), Expect = 2e-94 Identities = 401/475 (84%) Strand = Plus / Minus Query: 206 ttgattggaagagggtgggcatcactagttcatttggatttgcttttgttggacctgttg 265 ||||||||||||||||||||||||| || || || ||||||||||||||||| || |||| Sbjct: 666 ttgattggaagagggtgggcatcacaagctccttcggatttgcttttgttggtccagttg 607 Query: 266 gacattactggtatgaatacttggatcgtttcatccgtcggagatatcagcctagtacat 325 | |||||||||||||||||| ||||||| ||||||| ||||| | |||||||| || | Sbjct: 606 ggcattactggtatgaatacctggatcgcatcatccggcggaggtttcagcctaacacgt 547 Query: 326 tcaaatttgttgcctcaaaagttgctgcagatggtctcctctttggaccattagatcttc 385 ||||||| || |||||||||||||| || ||||| ||||||| |||||| |||| || | Sbjct: 546 tcaaattcgtcgcctcaaaagttgccgcggatggattcctcttcggaccactagacctcc 487 Query: 386 tcttgttcttctcgtatgtgggtctcgcttctggaaggagtgtggagcaggtgaaggatg 445 || |||||||||| ||||| ||||| | | |||||||| | |||||||||||||| | Sbjct: 486 tcctgttcttctcatatgttggtctgggtcaaggaaggagcatagagcaggtgaaggagg 427 Query: 446 acgtgaaaagggattttgttcctgctctagtattaggaggaaccatctggccagccgtgc 505 ||||||| ||||| || |||| ||||| || ||||| |||||||||||||| || |||| Sbjct: 426 acgtgaagagggacttcattccggctctggtgttaggcggaaccatctggcctgctgtgc 367 Query: 506 aaattgcaaacttccgcttcatccccgtgaggtatcaacttctttatgtgaacttgttct 565 | || || |||||||||||| | |||||| |||| || || || |||||||||||||||| Sbjct: 366 agatcgcgaacttccgcttcgttcccgtgcggtaccagctcctgtatgtgaacttgttct 307 Query: 566 gcctcttggacagttgtttcttatcatggattgagcaacaaggagatgcatcttggaagc 625 ||||| ||||||| || ||| | || ||||||||||| || || || || || ||||||| Sbjct: 306 gcctcctggacagctgcttcctgtcgtggattgagcagcagggtgacgcctcctggaagc 247 Query: 626 gatggttcacctcgttccagaaaattgaagaccagaagagtaaggtttgatttga 680 | |||||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 246 ggtggttcacttcgttccagaaaatcgaagaccagaagggtaaggtttgatttga 192 Score = 99.6 bits (50), Expect = 2e-17 Identities = 59/62 (95%) Strand = Plus / Minus Query: 91 agctccggcatcctctggggcctcggcgacatcggcgcccaggccgtcacccgctactcc 150 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 808 agctccggcatcctctggggcctcggcgacatcggcgcccagaccgtcacctactactcc 749 Query: 151 gc 152 || Sbjct: 748 gc 747