BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf061e07 (949 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060736.1| Oryza sativa (japonica cultivar-group) Os04g... 216 1e-52 emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 216 1e-52 emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 216 1e-52 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,... 216 1e-52 >ref|NM_001060736.1| Oryza sativa (japonica cultivar-group) Os04g0669200 (Os04g0669200) mRNA, complete cds Length = 821 Score = 216 bits (109), Expect = 1e-52 Identities = 166/185 (89%) Strand = Plus / Plus Query: 199 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 258 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 133 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 192 Query: 259 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgc 318 |||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 193 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 252 Query: 319 ccgcgcatacgacgtcgccgcgcggaacctccgcggaccgctcgccaagaccaacttccc 378 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 253 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 312 Query: 379 cctcg 383 |||| Sbjct: 313 gctcg 317 Score = 196 bits (99), Expect = 1e-46 Identities = 184/211 (87%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 495 cggcggtgcctcgcaggcgggtgccgcgccaaccgccgccggcgcccgacgccggctgcc 554 |||||||||| || |||||||| ||||| | |||| |||||||||||||||||||||| Sbjct: 468 cggcggtgccccggaggcgggtcccgcggcccgcgccaccggcgcccgacgccggctgcc 527 Query: 555 acagcgactgcgcctcgtcggcctccgtcgtggatgatgacgacgacgcttccaccgtcc 614 |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct: 528 acagcgactgcgcctcgtcggcctccgtcgtggacgacgccgacgacgcctccaccgttc 587 Query: 615 ggtctcgc---gcgccgttcgacctcaacctcccgccgccgccggacagggacca---cg 668 |||| ||| ||| ||||||||||||||||||||||||||| |||| ||||||| || Sbjct: 588 ggtcccgcgtggcggcgttcgacctcaacctcccgccgccgctggaccgggaccacgtcg 647 Query: 669 aactgtgcacggagctacggctctggtagga 699 | ||||||||||| || |||||||| ||||| Sbjct: 648 acctgtgcacggacctgcggctctgatagga 678 >emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 216 bits (109), Expect = 1e-52 Identities = 166/185 (89%) Strand = Plus / Minus Query: 199 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 258 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 84521 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 84462 Query: 259 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgc 318 |||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 84461 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 84402 Query: 319 ccgcgcatacgacgtcgccgcgcggaacctccgcggaccgctcgccaagaccaacttccc 378 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 84401 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 84342 Query: 379 cctcg 383 |||| Sbjct: 84341 gctcg 84337 Score = 196 bits (99), Expect = 1e-46 Identities = 184/211 (87%), Gaps = 6/211 (2%) Strand = Plus / Minus Query: 495 cggcggtgcctcgcaggcgggtgccgcgccaaccgccgccggcgcccgacgccggctgcc 554 |||||||||| || |||||||| ||||| | |||| |||||||||||||||||||||| Sbjct: 84186 cggcggtgccccggaggcgggtcccgcggcccgcgccaccggcgcccgacgccggctgcc 84127 Query: 555 acagcgactgcgcctcgtcggcctccgtcgtggatgatgacgacgacgcttccaccgtcc 614 |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct: 84126 acagcgactgcgcctcgtcggcctccgtcgtggacgacgccgacgacgcctccaccgttc 84067 Query: 615 ggtctcgc---gcgccgttcgacctcaacctcccgccgccgccggacagggacca---cg 668 |||| ||| ||| ||||||||||||||||||||||||||| |||| ||||||| || Sbjct: 84066 ggtcccgcgtggcggcgttcgacctcaacctcccgccgccgctggaccgggaccacgtcg 84007 Query: 669 aactgtgcacggagctacggctctggtagga 699 | ||||||||||| || |||||||| ||||| Sbjct: 84006 acctgtgcacggacctgcggctctgatagga 83976 >emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 216 bits (109), Expect = 1e-52 Identities = 166/185 (89%) Strand = Plus / Minus Query: 199 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 258 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 18891 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 18832 Query: 259 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgc 318 |||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 18831 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 18772 Query: 319 ccgcgcatacgacgtcgccgcgcggaacctccgcggaccgctcgccaagaccaacttccc 378 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 18771 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 18712 Query: 379 cctcg 383 |||| Sbjct: 18711 gctcg 18707 Score = 196 bits (99), Expect = 1e-46 Identities = 184/211 (87%), Gaps = 6/211 (2%) Strand = Plus / Minus Query: 495 cggcggtgcctcgcaggcgggtgccgcgccaaccgccgccggcgcccgacgccggctgcc 554 |||||||||| || |||||||| ||||| | |||| |||||||||||||||||||||| Sbjct: 18556 cggcggtgccccggaggcgggtcccgcggcccgcgccaccggcgcccgacgccggctgcc 18497 Query: 555 acagcgactgcgcctcgtcggcctccgtcgtggatgatgacgacgacgcttccaccgtcc 614 |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct: 18496 acagcgactgcgcctcgtcggcctccgtcgtggacgacgccgacgacgcctccaccgttc 18437 Query: 615 ggtctcgc---gcgccgttcgacctcaacctcccgccgccgccggacagggacca---cg 668 |||| ||| ||| ||||||||||||||||||||||||||| |||| ||||||| || Sbjct: 18436 ggtcccgcgtggcggcgttcgacctcaacctcccgccgccgctggaccgggaccacgtcg 18377 Query: 669 aactgtgcacggagctacggctctggtagga 699 | ||||||||||| || |||||||| ||||| Sbjct: 18376 acctgtgcacggacctgcggctctgatagga 18346 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 216 bits (109), Expect = 1e-52 Identities = 166/185 (89%) Strand = Plus / Minus Query: 199 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 258 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 34168213 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 34168154 Query: 259 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgc 318 |||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 34168153 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 34168094 Query: 319 ccgcgcatacgacgtcgccgcgcggaacctccgcggaccgctcgccaagaccaacttccc 378 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 34168093 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 34168034 Query: 379 cctcg 383 |||| Sbjct: 34168033 gctcg 34168029 Score = 196 bits (99), Expect = 1e-46 Identities = 184/211 (87%), Gaps = 6/211 (2%) Strand = Plus / Minus Query: 495 cggcggtgcctcgcaggcgggtgccgcgccaaccgccgccggcgcccgacgccggctgcc 554 |||||||||| || |||||||| ||||| | |||| |||||||||||||||||||||| Sbjct: 34167878 cggcggtgccccggaggcgggtcccgcggcccgcgccaccggcgcccgacgccggctgcc 34167819 Query: 555 acagcgactgcgcctcgtcggcctccgtcgtggatgatgacgacgacgcttccaccgtcc 614 |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct: 34167818 acagcgactgcgcctcgtcggcctccgtcgtggacgacgccgacgacgcctccaccgttc 34167759 Query: 615 ggtctcgc---gcgccgttcgacctcaacctcccgccgccgccggacagggacca---cg 668 |||| ||| ||| ||||||||||||||||||||||||||| |||| ||||||| || Sbjct: 34167758 ggtcccgcgtggcggcgttcgacctcaacctcccgccgccgctggaccgggaccacgtcg 34167699 Query: 669 aactgtgcacggagctacggctctggtagga 699 | ||||||||||| || |||||||| ||||| Sbjct: 34167698 acctgtgcacggacctgcggctctgatagga 34167668 Score = 109 bits (55), Expect = 2e-20 Identities = 142/171 (83%) Strand = Plus / Plus Query: 215 ggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccgcgacccggccaagcgc 274 |||||| ||||||| |||||||| | | |||||||||||||||||||||||||| | Sbjct: 30973283 ggcgtgaggaagcgcccgtggggcaggtacgcggcggagatccgcgacccggccaggaag 30973342 Query: 275 gcgcgcgtctggctcggcaccttcgactccgcggaggccgccgcccgcgcatacgacgtc 334 ||||| || |||||||||||||||||| |||| |||||||| || ||||| |||||| | Sbjct: 30973343 gcgcgggtgtggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagc 30973402 Query: 335 gccgcgcggaacctccgcggaccgctcgccaagaccaacttccccctcgcc 385 ||||||| || ||||||| || |||||||||||||||||| ||||| Sbjct: 30973403 gccgcgctccacttccgcgggcccaaggccaagaccaacttccccgtcgcc 30973453 Score = 81.8 bits (41), Expect = 5e-12 Identities = 97/115 (84%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 209 tacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccgcgacccggcc 268 |||||||| ||| || ||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 27345743 tacaggggggtgaggcagcggccgtggggcaagttcgcggcggagatccgggaccccgcc 27345684 Query: 269 aagc---gcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgccc 320 ||| |||||||||| ||||||||||| |||||| |||| |||| |||||||| Sbjct: 27345683 aagaacggcgcgcgcgtgtggctcggcacgttcgacaccgccgaggacgccgccc 27345629 >emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 216 bits (109), Expect = 1e-52 Identities = 166/185 (89%) Strand = Plus / Minus Query: 199 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 258 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 79595 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 79536 Query: 259 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgcggaggccgccgc 318 |||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 79535 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 79476 Query: 319 ccgcgcatacgacgtcgccgcgcggaacctccgcggaccgctcgccaagaccaacttccc 378 || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 79475 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 79416 Query: 379 cctcg 383 |||| Sbjct: 79415 gctcg 79411 Score = 196 bits (99), Expect = 1e-46 Identities = 184/211 (87%), Gaps = 6/211 (2%) Strand = Plus / Minus Query: 495 cggcggtgcctcgcaggcgggtgccgcgccaaccgccgccggcgcccgacgccggctgcc 554 |||||||||| || |||||||| ||||| | |||| |||||||||||||||||||||| Sbjct: 79260 cggcggtgccccggaggcgggtcccgcggcccgcgccaccggcgcccgacgccggctgcc 79201 Query: 555 acagcgactgcgcctcgtcggcctccgtcgtggatgatgacgacgacgcttccaccgtcc 614 |||||||||||||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct: 79200 acagcgactgcgcctcgtcggcctccgtcgtggacgacgccgacgacgcctccaccgttc 79141 Query: 615 ggtctcgc---gcgccgttcgacctcaacctcccgccgccgccggacagggacca---cg 668 |||| ||| ||| ||||||||||||||||||||||||||| |||| ||||||| || Sbjct: 79140 ggtcccgcgtggcggcgttcgacctcaacctcccgccgccgctggaccgggaccacgtcg 79081 Query: 669 aactgtgcacggagctacggctctggtagga 699 | ||||||||||| || |||||||| ||||| Sbjct: 79080 acctgtgcacggacctgcggctctgatagga 79050