BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf061d01 (1842 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 3e-27 emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4,... 133 3e-27 emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 133 3e-27 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 133 bits (67), Expect = 3e-27 Identities = 150/179 (83%), Gaps = 9/179 (5%) Strand = Plus / Plus Query: 1136 aggtggagattacatgccgagggcgaccgctccccccgttcctggccctgcagtatgtcc 1195 |||||||||| |||||| ||||| ||| ||||| |||| ||||| | ||||| |||||| Sbjct: 19584198 aggtggagataacatgcagagggagacagctcctcccgatcctgacattgcagcatgtcc 19584257 Query: 1196 gcgacagcatctggtgccagagggacgccgtgtcgccgtcggttgagccggacatgtcaa 1255 | |||||||||||||||| ||| ||||||||||||||||||| | ||||||||| ||| Sbjct: 19584258 gtgacagcatctggtgccggagagacgccgtgtcgccgtcggccgcgccggacataccaa 19584317 Query: 1256 ccgctaac---------cacatcatggttttgcagtatggcagaaggccgtagtagaca 1305 ||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19584318 ccgctgaccaccaccagcacatcatggttttgcagtatggcagaaggccctagtagaca 19584376 Score = 109 bits (55), Expect = 4e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 1065 ggatgggagggtgacagtcaggttgttgatcaagtacttggttagcaagcttggattgga 1124 |||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||||| Sbjct: 19574179 ggatgggagggtgacagtaaggttgctgaccaagtacctggttaacaagcttggattgga 19574238 Query: 1125 agatgaatcagaggt 1139 ||||||||||||||| Sbjct: 19574239 agatgaatcagaggt 19574253 Score = 93.7 bits (47), Expect = 2e-15 Identities = 72/78 (92%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 1551 ccaccccttttgtataccggcttgttttctc-caatg--aattatgagagaaaacagctt 1607 ||||||||||||||||||||||||||||||| || || |||| || ||||||||||||| Sbjct: 19584714 ccaccccttttgtataccggcttgttttctctcagtgaaaattgtgggagaaaacagctt 19584773 Query: 1608 ggaagttgcctgacagga 1625 |||||||||||||||||| Sbjct: 19584774 ggaagttgcctgacagga 19584791 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 1014 agggagggagccattcttgcctcagattccaagaagctacttacggatcaag 1065 ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 19573906 agggagggagccattcttgcctcagattccaaggagctacctacggatcaag 19573957 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 752 gccccgccatgcccggcattccgcaggcgtcgataccgctgcccgtgccgcgcgccgggc 811 ||||||||||||||||||||||||||||||||||||| || | ||| |||||||| | Sbjct: 19573276 gccccgccatgcccggcattccgcaggcgtcgatacccacgcacatgctgcgcgccgccc 19573335 Query: 812 cgccctggcttccgccgtgga 832 |||||||||| || ||||||| Sbjct: 19573336 cgccctggctgccaccgtgga 19573356 >emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 133 bits (67), Expect = 3e-27 Identities = 150/179 (83%), Gaps = 9/179 (5%) Strand = Plus / Plus Query: 1136 aggtggagattacatgccgagggcgaccgctccccccgttcctggccctgcagtatgtcc 1195 |||||||||| |||||| ||||| ||| ||||| |||| ||||| | ||||| |||||| Sbjct: 104843 aggtggagataacatgcagagggagacagctcctcccgatcctgacattgcagcatgtcc 104902 Query: 1196 gcgacagcatctggtgccagagggacgccgtgtcgccgtcggttgagccggacatgtcaa 1255 | |||||||||||||||| ||| ||||||||||||||||||| | ||||||||| ||| Sbjct: 104903 gtgacagcatctggtgccggagagacgccgtgtcgccgtcggccgcgccggacataccaa 104962 Query: 1256 ccgctaac---------cacatcatggttttgcagtatggcagaaggccgtagtagaca 1305 ||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104963 ccgctgaccaccaccagcacatcatggttttgcagtatggcagaaggccctagtagaca 105021 Score = 109 bits (55), Expect = 4e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 1065 ggatgggagggtgacagtcaggttgttgatcaagtacttggttagcaagcttggattgga 1124 |||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||||| Sbjct: 94824 ggatgggagggtgacagtaaggttgctgaccaagtacctggttaacaagcttggattgga 94883 Query: 1125 agatgaatcagaggt 1139 ||||||||||||||| Sbjct: 94884 agatgaatcagaggt 94898 Score = 93.7 bits (47), Expect = 2e-15 Identities = 72/78 (92%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 1551 ccaccccttttgtataccggcttgttttctc-caatg--aattatgagagaaaacagctt 1607 ||||||||||||||||||||||||||||||| || || |||| || ||||||||||||| Sbjct: 105359 ccaccccttttgtataccggcttgttttctctcagtgaaaattgtgggagaaaacagctt 105418 Query: 1608 ggaagttgcctgacagga 1625 |||||||||||||||||| Sbjct: 105419 ggaagttgcctgacagga 105436 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 1014 agggagggagccattcttgcctcagattccaagaagctacttacggatcaag 1065 ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 94551 agggagggagccattcttgcctcagattccaaggagctacctacggatcaag 94602 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 752 gccccgccatgcccggcattccgcaggcgtcgataccgctgcccgtgccgcgcgccgggc 811 ||||||||||||||||||||||||||||||||||||| || | ||| |||||||| | Sbjct: 93921 gccccgccatgcccggcattccgcaggcgtcgatacccacgcacatgctgcgcgccgccc 93980 Query: 812 cgccctggcttccgccgtgga 832 |||||||||| || ||||||| Sbjct: 93981 cgccctggctgccaccgtgga 94001 >emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 133 bits (67), Expect = 3e-27 Identities = 150/179 (83%), Gaps = 9/179 (5%) Strand = Plus / Plus Query: 1136 aggtggagattacatgccgagggcgaccgctccccccgttcctggccctgcagtatgtcc 1195 |||||||||| |||||| ||||| ||| ||||| |||| ||||| | ||||| |||||| Sbjct: 34924 aggtggagataacatgcagagggagacagctcctcccgatcctgacattgcagcatgtcc 34983 Query: 1196 gcgacagcatctggtgccagagggacgccgtgtcgccgtcggttgagccggacatgtcaa 1255 | |||||||||||||||| ||| ||||||||||||||||||| | ||||||||| ||| Sbjct: 34984 gtgacagcatctggtgccggagagacgccgtgtcgccgtcggccgcgccggacataccaa 35043 Query: 1256 ccgctaac---------cacatcatggttttgcagtatggcagaaggccgtagtagaca 1305 ||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 35044 ccgctgaccaccaccagcacatcatggttttgcagtatggcagaaggccctagtagaca 35102 Score = 109 bits (55), Expect = 4e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 1065 ggatgggagggtgacagtcaggttgttgatcaagtacttggttagcaagcttggattgga 1124 |||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||||| Sbjct: 24905 ggatgggagggtgacagtaaggttgctgaccaagtacctggttaacaagcttggattgga 24964 Query: 1125 agatgaatcagaggt 1139 ||||||||||||||| Sbjct: 24965 agatgaatcagaggt 24979 Score = 93.7 bits (47), Expect = 2e-15 Identities = 72/78 (92%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 1551 ccaccccttttgtataccggcttgttttctc-caatg--aattatgagagaaaacagctt 1607 ||||||||||||||||||||||||||||||| || || |||| || ||||||||||||| Sbjct: 35440 ccaccccttttgtataccggcttgttttctctcagtgaaaattgtgggagaaaacagctt 35499 Query: 1608 ggaagttgcctgacagga 1625 |||||||||||||||||| Sbjct: 35500 ggaagttgcctgacagga 35517 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 1014 agggagggagccattcttgcctcagattccaagaagctacttacggatcaag 1065 ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 24632 agggagggagccattcttgcctcagattccaaggagctacctacggatcaag 24683 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 752 gccccgccatgcccggcattccgcaggcgtcgataccgctgcccgtgccgcgcgccgggc 811 ||||||||||||||||||||||||||||||||||||| || | ||| |||||||| | Sbjct: 24002 gccccgccatgcccggcattccgcaggcgtcgatacccacgcacatgctgcgcgccgccc 24061 Query: 812 cgccctggcttccgccgtgga 832 |||||||||| || ||||||| Sbjct: 24062 cgccctggctgccaccgtgga 24082