BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf059l06 (1225 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070132.1| Oryza sativa (japonica cultivar-group) Os09g... 331 4e-87 dbj|AK073194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 4e-87 emb|CT834418.1| Oryza sativa (indica cultivar-group) cDNA clone:... 212 3e-51 gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 204 6e-49 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 204 6e-49 >ref|NM_001070132.1| Oryza sativa (japonica cultivar-group) Os09g0504800 (Os09g0504800) mRNA, complete cds Length = 1028 Score = 331 bits (167), Expect = 4e-87 Identities = 266/299 (88%) Strand = Plus / Plus Query: 424 agagtccagttcaggaaggtggcgtcgcacacacggtgggtggaggatgtcggcacggcg 483 |||||||||||||||||||||||||||| | | |||| ||||||| | || ||||| Sbjct: 170 agagtccagttcaggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcggcg 229 Query: 484 gaggtggtggatagtaagggaaagctctggttgaccaccggtgtcacccggggcggcaag 543 ||||| ||||| || ||||| ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 230 gaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaag 289 Query: 544 ctgtactacagtgtcgaggagattaggttcttagcagaaagaggggcattggttcttctt 603 |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 290 ctgtactacaatgtcgaggagattgggttcttggcagaaagaggggcattggttcttctt 349 Query: 604 gatgatgaggatgaaacaatagggatggaggatatctatgaaaagattgctggaggaaat 663 ||| | |||| ||||||||| || |||||||| ||||| | ||||||||||||||| || Sbjct: 350 gattacgagggtgaaacaattggaatggaggaaatctacggaaagattgctggagggaaa 409 Query: 664 tatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgcttggatatat 722 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 410 tatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgctcggctatat 468 Score = 163 bits (82), Expect = 2e-36 Identities = 143/162 (88%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 721 atccatcatttgaagtgtatctaccaaacagcaaatttaaaaagtcatccccaggaatcc 780 ||||||| ||||||||||||||||| || ||||||||||| ||| ||||||||||| || Sbjct: 639 atccatcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagacc 698 Query: 781 ctagtttcctcctatgcctgttaagggataagccaccctcaagggatgaact-gaaaccg 839 |||||||| |||||||||| ||||| | || ||||| |||||||| ||||| ||||||| Sbjct: 699 ctagtttcgtcctatgcctattaagcaacaaaccaccatcaagggaagaactagaaaccg 758 Query: 840 tggaaaacaagtttgagggcattcctctaaaattttgtcatg 881 | |||||||||||||||||||||||||| |||||||| |||| Sbjct: 759 ttgaaaacaagtttgagggcattcctctgaaattttgccatg 800 >dbj|AK073194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023G15, full insert sequence Length = 1030 Score = 331 bits (167), Expect = 4e-87 Identities = 266/299 (88%) Strand = Plus / Plus Query: 424 agagtccagttcaggaaggtggcgtcgcacacacggtgggtggaggatgtcggcacggcg 483 |||||||||||||||||||||||||||| | | |||| ||||||| | || ||||| Sbjct: 172 agagtccagttcaggaaggtggcgtcgcgcgcggtgtggctggaggaggctggtgcggcg 231 Query: 484 gaggtggtggatagtaagggaaagctctggttgaccaccggtgtcacccggggcggcaag 543 ||||| ||||| || ||||| ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 232 gaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaag 291 Query: 544 ctgtactacagtgtcgaggagattaggttcttagcagaaagaggggcattggttcttctt 603 |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 292 ctgtactacaatgtcgaggagattgggttcttggcagaaagaggggcattggttcttctt 351 Query: 604 gatgatgaggatgaaacaatagggatggaggatatctatgaaaagattgctggaggaaat 663 ||| | |||| ||||||||| || |||||||| ||||| | ||||||||||||||| || Sbjct: 352 gattacgagggtgaaacaattggaatggaggaaatctacggaaagattgctggagggaaa 411 Query: 664 tatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgcttggatatat 722 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 412 tatgggtgctcctgggatgccttccaagcttacaagcacttgaagttgctcggctatat 470 Score = 163 bits (82), Expect = 2e-36 Identities = 143/162 (88%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 721 atccatcatttgaagtgtatctaccaaacagcaaatttaaaaagtcatccccaggaatcc 780 ||||||| ||||||||||||||||| || ||||||||||| ||| ||||||||||| || Sbjct: 641 atccatcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagacc 700 Query: 781 ctagtttcctcctatgcctgttaagggataagccaccctcaagggatgaact-gaaaccg 839 |||||||| |||||||||| ||||| | || ||||| |||||||| ||||| ||||||| Sbjct: 701 ctagtttcgtcctatgcctattaagcaacaaaccaccatcaagggaagaactagaaaccg 760 Query: 840 tggaaaacaagtttgagggcattcctctaaaattttgtcatg 881 | |||||||||||||||||||||||||| |||||||| |||| Sbjct: 761 ttgaaaacaagtttgagggcattcctctgaaattttgccatg 802 >emb|CT834418.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111M19, full insert sequence Length = 1078 Score = 212 bits (107), Expect = 3e-51 Identities = 143/155 (92%) Strand = Plus / Minus Query: 568 aggttcttagcagaaagaggggcattggttcttcttgatgatgaggatgaaacaataggg 627 |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 227 aggttcttggcagaaagaggggcattggttcttcttgattatgagggtgaaacaattgga 168 Query: 628 atggaggatatctatgaaaagattgctggaggaaattatgggtgctcctgggatgccttc 687 |||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 167 atggaggaaatctacggaaagattgctggagggaagtatgggtgctcctgggatgccttc 108 Query: 688 caagcttacaagcacttgaagttgcttggatatat 722 |||||||||||||||||||||||||| || ||||| Sbjct: 107 caagcttacaagcacttgaagttgctcggctatat 73 Score = 121 bits (61), Expect = 7e-24 Identities = 115/133 (86%) Strand = Plus / Minus Query: 435 caggaaggtggcgtcgcacacacggtgggtggaggatgtcggcacggcggaggtggtgga 494 ||||||||||||||||| | | |||||||||||| | || |||||||||| ||||| Sbjct: 567 caggaaggtggcgtcgcgcgcggtgtgggtggaggaggctggtgcggcggaggttgtgga 508 Query: 495 tagtaagggaaagctctggttgaccaccggtgtcacccggggcggcaagctgtactacag 554 || ||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||| Sbjct: 507 cagcaagggcaagctctggctgaccaccggtgtcaaccgggacggcaagctgtactacaa 448 Query: 555 tgtcgaggagatt 567 ||||||||||||| Sbjct: 447 tgtcgaggagatt 435 >gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 204 bits (103), Expect = 6e-49 Identities = 142/155 (91%) Strand = Plus / Plus Query: 568 aggttcttagcagaaagaggggcattggttcttcttgatgatgaggatgaaacaataggg 627 |||||||| |||||||||||||||||||||||||||||| | |||| ||||||||| || Sbjct: 146437 aggttcttggcagaaagaggggcattggttcttcttgattacgagggtgaaacaattgga 146496 Query: 628 atggaggatatctatgaaaagattgctggaggaaattatgggtgctcctgggatgccttc 687 |||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 146497 atggaggaaatctacggaaagattgctggagggaaatatgggtgctcctgggatgccttc 146556 Query: 688 caagcttacaagcacttgaagttgcttggatatat 722 |||||||||||||||||||||||||| || ||||| Sbjct: 146557 caagcttacaagcacttgaagttgctcggctatat 146591 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 479 cggcggaggtggtggatagtaagggaaagctctggttgaccaccggtgtcacccggggcg 538 |||||||||| ||||| || ||||| ||||||||| ||||||||||||||| ||||| || Sbjct: 146139 cggcggaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacg 146198 Query: 539 gcaagctgtactacagtgtcgaggagatt 567 ||||||||||||||| ||||||||||||| Sbjct: 146199 gcaagctgtactacaatgtcgaggagatt 146227 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 721 atccatcatttgaagtgtatctaccaaacagcaaatttaaaaagtcatccccaggaatcc 780 ||||||| ||||||||||||||||| || ||||||||||| ||| ||||||||||| || Sbjct: 146762 atccatcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagacc 146821 Query: 781 ctagtttcctcctatgcctgttaagg 806 |||||||| |||||||||| |||||| Sbjct: 146822 ctagtttcgtcctatgcctattaagg 146847 Score = 83.8 bits (42), Expect = 2e-12 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 813 ccaccctcaagggatgaact-gaaaccgtggaaaacaagtttgagggcattcctctaaaa 871 ||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 147510 ccaccatcaagggaagaactagaaaccgttgaaaacaagtttgagggcattcctctgaaa 147569 Query: 872 ttttgtcatg 881 ||||| |||| Sbjct: 147570 ttttgccatg 147579 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 204 bits (103), Expect = 6e-49 Identities = 142/155 (91%) Strand = Plus / Plus Query: 568 aggttcttagcagaaagaggggcattggttcttcttgatgatgaggatgaaacaataggg 627 |||||||| |||||||||||||||||||||||||||||| | |||| ||||||||| || Sbjct: 19212787 aggttcttggcagaaagaggggcattggttcttcttgattacgagggtgaaacaattgga 19212846 Query: 628 atggaggatatctatgaaaagattgctggaggaaattatgggtgctcctgggatgccttc 687 |||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 19212847 atggaggaaatctacggaaagattgctggagggaaatatgggtgctcctgggatgccttc 19212906 Query: 688 caagcttacaagcacttgaagttgcttggatatat 722 |||||||||||||||||||||||||| || ||||| Sbjct: 19212907 caagcttacaagcacttgaagttgctcggctatat 19212941 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 479 cggcggaggtggtggatagtaagggaaagctctggttgaccaccggtgtcacccggggcg 538 |||||||||| ||||| || ||||| ||||||||| ||||||||||||||| ||||| || Sbjct: 19212489 cggcggaggttgtggacagcaagggcaagctctggctgaccaccggtgtcaaccgggacg 19212548 Query: 539 gcaagctgtactacagtgtcgaggagatt 567 ||||||||||||||| ||||||||||||| Sbjct: 19212549 gcaagctgtactacaatgtcgaggagatt 19212577 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 721 atccatcatttgaagtgtatctaccaaacagcaaatttaaaaagtcatccccaggaatcc 780 ||||||| ||||||||||||||||| || ||||||||||| ||| ||||||||||| || Sbjct: 19213112 atccatcctttgaagtgtatctaccgaatagcaaatttaagaagacatccccaggagacc 19213171 Query: 781 ctagtttcctcctatgcctgttaagg 806 |||||||| |||||||||| |||||| Sbjct: 19213172 ctagtttcgtcctatgcctattaagg 19213197 Score = 83.8 bits (42), Expect = 2e-12 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 813 ccaccctcaagggatgaact-gaaaccgtggaaaacaagtttgagggcattcctctaaaa 871 ||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 19213860 ccaccatcaagggaagaactagaaaccgttgaaaacaagtttgagggcattcctctgaaa 19213919 Query: 872 ttttgtcatg 881 ||||| |||| Sbjct: 19213920 ttttgccatg 19213929