BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058o15 (1903 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049060.1| Oryza sativa (japonica cultivar-group) Os01g... 280 2e-71 dbj|AK058731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 2e-71 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-38 dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-38 >ref|NM_001049060.1| Oryza sativa (japonica cultivar-group) Os01g0235800 (Os01g0235800) mRNA, partial cds Length = 1783 Score = 280 bits (141), Expect = 2e-71 Identities = 306/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 1307 ccaaatgttgctccttttcctacttttcctgaagctctaatg-atgtccatacttcagtt 1365 ||||||||||||| | |||| | ||||||||||||||||||| ||| |||| ||||| Sbjct: 328 ccaaatgttgctcatcttcccaattttcctgaagctctaatgcatggccatggctcagtc 387 Query: 1366 cttacagaaccccccacctttaggttattatgcccaaatgacaaggttggaagtatatta 1425 | | ||||||| || |||||||| |||||| ||| ||||||||||||| ||||| || Sbjct: 388 ccacctgaaccccttacttttaggttgttatgctcaagtgacaaggttggaggtataata 447 Query: 1426 ggaaagggtggaaacactatcaggactattgagaatgatacaggccgtgaaataaaagtt 1485 || ||||||||||||| ||||| | ||||| |||||||||||||| |||||||||| ||| Sbjct: 448 gggaagggtggaaacaatatcaagtctattcagaatgatacaggctgtgaaataaaggtt 507 Query: 1486 ctcgagactgttccgaaatcagaagaccgtatcatagttatttctggacctgcgcagccg 1545 || || |||||||| ||||| ||||| || ||| || |||| || ||||||||||| ||| Sbjct: 508 cttgatactgttccaaaatctgaagatcgcatcgtatttatctcaggacctgcgcatccg 567 Query: 1546 ggtgatggaatttcccctacacagaatgcaattctgcatgtgcagcgtataattgtgttg 1605 |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | Sbjct: 568 ggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattg---ta 624 Query: 1606 cctacctctaacaacaaggaaggtcctgcaatatgtaggctgatcgtttcacctaacca 1664 || ||||| |||| |||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 625 ccgacctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaacca 683 Score = 174 bits (88), Expect = 9e-40 Identities = 157/180 (87%) Strand = Plus / Plus Query: 923 gtgcttgatagccaagtaggttggcttttggggaagagcggtagtgtgattagggaaatg 982 ||||| || ||||||||||||||||||||||| |||| ||||||||||||| | ||||| Sbjct: 1 gtgctagacagccaagtaggttggcttttgggaaagaatggtagtgtgattaagcaaatg 60 Query: 983 tcggctgagagtggctgtgaaattcgagtttcaaaggagaagcttcctgcatgtgcttta 1042 || |||| || | ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 61 tctactgacagctgttgtgaaattcgagtttcaaaggacaagcttccattatgtgcttta 120 Query: 1043 tcccaagacaaactttgccagatcactggagagcttgactcagttaggaaaggtctgaat 1102 ||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 121 ccccgagatgaactttgccagatcactggagagctcgactcagtcaggaaaggtctgaat 180 >dbj|AK058731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F10, full insert sequence Length = 1783 Score = 280 bits (141), Expect = 2e-71 Identities = 306/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 1307 ccaaatgttgctccttttcctacttttcctgaagctctaatg-atgtccatacttcagtt 1365 ||||||||||||| | |||| | ||||||||||||||||||| ||| |||| ||||| Sbjct: 328 ccaaatgttgctcatcttcccaattttcctgaagctctaatgcatggccatggctcagtc 387 Query: 1366 cttacagaaccccccacctttaggttattatgcccaaatgacaaggttggaagtatatta 1425 | | ||||||| || |||||||| |||||| ||| ||||||||||||| ||||| || Sbjct: 388 ccacctgaaccccttacttttaggttgttatgctcaagtgacaaggttggaggtataata 447 Query: 1426 ggaaagggtggaaacactatcaggactattgagaatgatacaggccgtgaaataaaagtt 1485 || ||||||||||||| ||||| | ||||| |||||||||||||| |||||||||| ||| Sbjct: 448 gggaagggtggaaacaatatcaagtctattcagaatgatacaggctgtgaaataaaggtt 507 Query: 1486 ctcgagactgttccgaaatcagaagaccgtatcatagttatttctggacctgcgcagccg 1545 || || |||||||| ||||| ||||| || ||| || |||| || ||||||||||| ||| Sbjct: 508 cttgatactgttccaaaatctgaagatcgcatcgtatttatctcaggacctgcgcatccg 567 Query: 1546 ggtgatggaatttcccctacacagaatgcaattctgcatgtgcagcgtataattgtgttg 1605 |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | Sbjct: 568 ggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattg---ta 624 Query: 1606 cctacctctaacaacaaggaaggtcctgcaatatgtaggctgatcgtttcacctaacca 1664 || ||||| |||| |||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 625 ccgacctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaacca 683 Score = 174 bits (88), Expect = 9e-40 Identities = 157/180 (87%) Strand = Plus / Plus Query: 923 gtgcttgatagccaagtaggttggcttttggggaagagcggtagtgtgattagggaaatg 982 ||||| || ||||||||||||||||||||||| |||| ||||||||||||| | ||||| Sbjct: 1 gtgctagacagccaagtaggttggcttttgggaaagaatggtagtgtgattaagcaaatg 60 Query: 983 tcggctgagagtggctgtgaaattcgagtttcaaaggagaagcttcctgcatgtgcttta 1042 || |||| || | ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 61 tctactgacagctgttgtgaaattcgagtttcaaaggacaagcttccattatgtgcttta 120 Query: 1043 tcccaagacaaactttgccagatcactggagagcttgactcagttaggaaaggtctgaat 1102 ||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 121 ccccgagatgaactttgccagatcactggagagctcgactcagtcaggaaaggtctgaat 180 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 170 bits (86), Expect = 1e-38 Identities = 206/246 (83%) Strand = Plus / Plus Query: 818 gtgaaggctattttgcttgtctctgataggatttttgtaagtgaagatgaaaatgaaact 877 |||||||| ||||||||||| | ||| |||||||||||| |||| ||||||| ||| Sbjct: 7506478 gtgaaggccattttgcttgtatttgaccggatttttgtaaatgaaatggaaaatggaaca 7506537 Query: 878 ggggatgcatcaagcgagagaactcctgtttctttgagattatcggtgcttgatagccaa 937 || |||||||| | ||||||| || |||||| |||||||||| |||||| || |||||| Sbjct: 7506538 ggagatgcatctggtgagagaaatcatgtttcattgagattattggtgctagacagccaa 7506597 Query: 938 gtaggttggcttttggggaagagcggtagtgtgattagggaaatgtcggctgagagtggc 997 ||||||||||||||||| |||| ||||||||||||| | ||||||| |||| || | Sbjct: 7506598 gtaggttggcttttgggaaagaatggtagtgtgattaagcaaatgtctactgacagctgt 7506657 Query: 998 tgtgaaattcgagtttcaaaggagaagcttcctgcatgtgctttatcccaagacaaactt 1057 ||||||||||||||||||||||| |||||||| |||||||||| ||| ||| ||||| Sbjct: 7506658 tgtgaaattcgagtttcaaaggacaagcttccattatgtgctttaccccgagatgaactt 7506717 Query: 1058 tgccag 1063 |||||| Sbjct: 7506718 tgccag 7506723 Score = 147 bits (74), Expect = 2e-31 Identities = 195/234 (83%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1307 ccaaatgttgctccttttcctacttttcctgaagctctaatg-atgtccatacttcagtt 1365 ||||||||||||| | |||| | ||||||||||||||||||| ||| |||| ||||| Sbjct: 7507027 ccaaatgttgctcatcttcccaattttcctgaagctctaatgcatggccatggctcagtc 7507086 Query: 1366 cttacagaaccccccacctttaggttattatgcccaaatgacaaggttggaagtatatta 1425 | | ||||||| || |||||||| |||||| ||| ||||||||||||| ||||| || Sbjct: 7507087 ccacctgaaccccttacttttaggttgttatgctcaagtgacaaggttggaggtataata 7507146 Query: 1426 ggaaagggtggaaacactatcaggactattgagaatgatacaggccgtgaaataaaagtt 1485 || ||||||||||||| ||||| | ||||| |||||||||||||| |||||||||| ||| Sbjct: 7507147 gggaagggtggaaacaatatcaagtctattcagaatgatacaggctgtgaaataaaggtt 7507206 Query: 1486 ctcgagactgttccgaaatcagaagaccgtatcatagttatttctggacctgcg 1539 || || |||||||| ||||| ||||| || ||| || |||| || ||||||||| Sbjct: 7507207 cttgatactgttccaaaatctgaagatcgcatcgtatttatctcaggacctgcg 7507260 Score = 135 bits (68), Expect = 7e-28 Identities = 109/122 (89%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 1543 ccgggtgatggaatttcccctacacagaatgcaattctgcatgtgcagcgtataattgtg 1602 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 7508094 ccgggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattg-- 7508151 Query: 1603 ttgcctacctctaacaacaaggaaggtcctgcaatatgtaggctgatcgtttcacctaac 1662 | || ||||| |||| |||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 7508152 -taccgacctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaac 7508210 Query: 1663 ca 1664 || Sbjct: 7508211 ca 7508212 >dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 170 bits (86), Expect = 1e-38 Identities = 206/246 (83%) Strand = Plus / Plus Query: 818 gtgaaggctattttgcttgtctctgataggatttttgtaagtgaagatgaaaatgaaact 877 |||||||| ||||||||||| | ||| |||||||||||| |||| ||||||| ||| Sbjct: 55270 gtgaaggccattttgcttgtatttgaccggatttttgtaaatgaaatggaaaatggaaca 55329 Query: 878 ggggatgcatcaagcgagagaactcctgtttctttgagattatcggtgcttgatagccaa 937 || |||||||| | ||||||| || |||||| |||||||||| |||||| || |||||| Sbjct: 55330 ggagatgcatctggtgagagaaatcatgtttcattgagattattggtgctagacagccaa 55389 Query: 938 gtaggttggcttttggggaagagcggtagtgtgattagggaaatgtcggctgagagtggc 997 ||||||||||||||||| |||| ||||||||||||| | ||||||| |||| || | Sbjct: 55390 gtaggttggcttttgggaaagaatggtagtgtgattaagcaaatgtctactgacagctgt 55449 Query: 998 tgtgaaattcgagtttcaaaggagaagcttcctgcatgtgctttatcccaagacaaactt 1057 ||||||||||||||||||||||| |||||||| |||||||||| ||| ||| ||||| Sbjct: 55450 tgtgaaattcgagtttcaaaggacaagcttccattatgtgctttaccccgagatgaactt 55509 Query: 1058 tgccag 1063 |||||| Sbjct: 55510 tgccag 55515 Score = 147 bits (74), Expect = 2e-31 Identities = 195/234 (83%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1307 ccaaatgttgctccttttcctacttttcctgaagctctaatg-atgtccatacttcagtt 1365 ||||||||||||| | |||| | ||||||||||||||||||| ||| |||| ||||| Sbjct: 55819 ccaaatgttgctcatcttcccaattttcctgaagctctaatgcatggccatggctcagtc 55878 Query: 1366 cttacagaaccccccacctttaggttattatgcccaaatgacaaggttggaagtatatta 1425 | | ||||||| || |||||||| |||||| ||| ||||||||||||| ||||| || Sbjct: 55879 ccacctgaaccccttacttttaggttgttatgctcaagtgacaaggttggaggtataata 55938 Query: 1426 ggaaagggtggaaacactatcaggactattgagaatgatacaggccgtgaaataaaagtt 1485 || ||||||||||||| ||||| | ||||| |||||||||||||| |||||||||| ||| Sbjct: 55939 gggaagggtggaaacaatatcaagtctattcagaatgatacaggctgtgaaataaaggtt 55998 Query: 1486 ctcgagactgttccgaaatcagaagaccgtatcatagttatttctggacctgcg 1539 || || |||||||| ||||| ||||| || ||| || |||| || ||||||||| Sbjct: 55999 cttgatactgttccaaaatctgaagatcgcatcgtatttatctcaggacctgcg 56052 Score = 135 bits (68), Expect = 7e-28 Identities = 109/122 (89%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 1543 ccgggtgatggaatttcccctacacagaatgcaattctgcatgtgcagcgtataattgtg 1602 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 56886 ccgggtgatggaatttcccctgcacagaatgcaattctgcatgtgcagcgtaaaattg-- 56943 Query: 1603 ttgcctacctctaacaacaaggaaggtcctgcaatatgtaggctgatcgtttcacctaac 1662 | || ||||| |||| |||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 56944 -taccgacctccaacaccaaggagggtcctgcgatatgtaggctgattgtttcaccgaac 57002 Query: 1663 ca 1664 || Sbjct: 57003 ca 57004