BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058m01 (965 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061789.1| Oryza sativa (japonica cultivar-group) Os05g... 432 e-117 gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 196 1e-46 gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 196 1e-46 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 >ref|NM_001061789.1| Oryza sativa (japonica cultivar-group) Os05g0344400 (Os05g0344400) mRNA, complete cds Length = 615 Score = 432 bits (218), Expect = e-117 Identities = 398/458 (86%) Strand = Plus / Plus Query: 257 gtgcggcgctggcggcggcaggacctcctggacaggtccgggtcggcgctgcgggccgcc 316 |||||||||||||||||||||||||||||||| | ||||||||||||||| || | |||| Sbjct: 142 gtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgcc 201 Query: 317 gcgtgggtactctccctgctcgccttcgtcgttatggccgccaacgagcacggcgactgg 376 ||||||| ||||||| |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 202 gcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactgg 261 Query: 377 aggcagttcgatcactacgaggagtacaggtacgtcgtcgcgatcgcgctgctcgtgttc 436 ||||||||||| ||||||||||||||||||||||| |||||||||| | |||||| ||| Sbjct: 262 aggcagttcgagcactacgaggagtacaggtacgtggtcgcgatcggggtgctcgccttc 321 Query: 437 atctacaccacgctgcagctggtgcggcacggcatccggctcaccagcggccaggacctg 496 |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||| Sbjct: 322 atctacacgacgctgcagctggtgcggcacggcgtacggctcaccggcggccaggacctg 381 Query: 497 cagggcaaggtcgtcctcctcgtcgacttcgccggagatcaggtggctgcttaccttctg 556 ||||||||||||| | | ||||||||||||||||||||||||||| | || ||||| ||| Sbjct: 382 cagggcaaggtcgccgtactcgtcgacttcgccggagatcaggtgacggcgtacctgctg 441 Query: 557 atgtctgcactgtctgccgcgattccaatcacgaaccgcatgcgaaaaggcgcggacaac 616 ||||| || |||| || ||||| || || |||||| | ||| | |||||||||||||| Sbjct: 442 atgtcggcggtgtcggcggcgatcccgataacgaacaggatgagggaaggcgcggacaac 501 Query: 617 atattcaccgactcatccgcagcttccatcagcatggcattctttgcgttcgtctgcctc 676 | ||||||||||| || || || |||||||||||||| ||||| || ||| |||||||| Sbjct: 502 gtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcgccttcctctgcctc 561 Query: 677 gcgctagccgccctcatctcaggtttcaggctggccaa 714 || || |||||||| |||| || |||| ||| ||||| Sbjct: 562 gccctctccgccctcgtctccggcttcaagctcgccaa 599 >gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 257 gtgcggcgctggcggcggcaggacctcctggacaggtccgggtcggcgctgcgggccgcc 316 |||||||||||||||||||||||||||||||| | ||||||||||||||| || | |||| Sbjct: 136793 gtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgcc 136734 Query: 317 gcgtgggtactctccctgctcgccttcgtcgttatggccgccaacgagcacggcgactgg 376 ||||||| ||||||| |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 136733 gcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactgg 136674 Query: 377 aggcagttcgatcactacgaggagtacaggt 407 ||||||||||| ||||||||||||||||||| Sbjct: 136673 aggcagttcgagcactacgaggagtacaggt 136643 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 403 caggtacgtcgtcgcgatcgcgctgctcgtgttcatctacaccacgctgcagctggtgcg 462 ||||||||| |||||||||| | |||||| ||||||||||| ||||||||||||||||| Sbjct: 136457 caggtacgtggtcgcgatcggggtgctcgccttcatctacacgacgctgcagctggtgcg 136398 Query: 463 gcacggcatccggctcaccagcggccaggacctgcagggcaaggtcgtcctcctcgtcga 522 ||||||| | ||||||||| ||||||||||||||||||||||||||| | | |||||||| Sbjct: 136397 gcacggcgtacggctcaccggcggccaggacctgcagggcaaggtcgccgtactcgtcga 136338 Query: 523 cttcgccggagatcaggt 540 |||||||||||||||||| Sbjct: 136337 cttcgccggagatcaggt 136320 Score = 79.8 bits (40), Expect = 2e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 603 aaggcgcggacaacatattcaccgactcatccgcagcttccatcagcatggcattctttg 662 |||||||||||||| | ||||||||||| || || || |||||||||||||| ||||| | Sbjct: 134749 aaggcgcggacaacgtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcg 134690 Query: 663 cgttcgtctgcctcgcgctagccgccctcatctcaggtttcaggctggccaa 714 | ||| |||||||||| || |||||||| |||| || |||| ||| ||||| Sbjct: 134689 ccttcctctgcctcgccctctccgccctcgtctccggcttcaagctcgccaa 134638 >gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 257 gtgcggcgctggcggcggcaggacctcctggacaggtccgggtcggcgctgcgggccgcc 316 |||||||||||||||||||||||||||||||| | ||||||||||||||| || | |||| Sbjct: 2212 gtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgcc 2153 Query: 317 gcgtgggtactctccctgctcgccttcgtcgttatggccgccaacgagcacggcgactgg 376 ||||||| ||||||| |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 2152 gcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactgg 2093 Query: 377 aggcagttcgatcactacgaggagtacaggt 407 ||||||||||| ||||||||||||||||||| Sbjct: 2092 aggcagttcgagcactacgaggagtacaggt 2062 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 403 caggtacgtcgtcgcgatcgcgctgctcgtgttcatctacaccacgctgcagctggtgcg 462 ||||||||| |||||||||| | |||||| ||||||||||| ||||||||||||||||| Sbjct: 1876 caggtacgtggtcgcgatcggggtgctcgccttcatctacacgacgctgcagctggtgcg 1817 Query: 463 gcacggcatccggctcaccagcggccaggacctgcagggcaaggtcgtcctcctcgtcga 522 ||||||| | ||||||||| ||||||||||||||||||||||||||| | | |||||||| Sbjct: 1816 gcacggcgtacggctcaccggcggccaggacctgcagggcaaggtcgccgtactcgtcga 1757 Query: 523 cttcgccggagatcaggt 540 |||||||||||||||||| Sbjct: 1756 cttcgccggagatcaggt 1739 Score = 79.8 bits (40), Expect = 2e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 603 aaggcgcggacaacatattcaccgactcatccgcagcttccatcagcatggcattctttg 662 |||||||||||||| | ||||||||||| || || || |||||||||||||| ||||| | Sbjct: 168 aaggcgcggacaacgtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcg 109 Query: 663 cgttcgtctgcctcgcgctagccgccctcatctcaggtttcaggctggccaa 714 | ||| |||||||||| || |||||||| |||| || |||| ||| ||||| Sbjct: 108 ccttcctctgcctcgccctctccgccctcgtctccggcttcaagctcgccaa 57 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 196 bits (99), Expect = 1e-46 Identities = 138/151 (91%) Strand = Plus / Minus Query: 257 gtgcggcgctggcggcggcaggacctcctggacaggtccgggtcggcgctgcgggccgcc 316 |||||||||||||||||||||||||||||||| | ||||||||||||||| || | |||| Sbjct: 16051042 gtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgcc 16050983 Query: 317 gcgtgggtactctccctgctcgccttcgtcgttatggccgccaacgagcacggcgactgg 376 ||||||| ||||||| |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 16050982 gcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactgg 16050923 Query: 377 aggcagttcgatcactacgaggagtacaggt 407 ||||||||||| ||||||||||||||||||| Sbjct: 16050922 aggcagttcgagcactacgaggagtacaggt 16050892 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 403 caggtacgtcgtcgcgatcgcgctgctcgtgttcatctacaccacgctgcagctggtgcg 462 ||||||||| |||||||||| | |||||| ||||||||||| ||||||||||||||||| Sbjct: 16050706 caggtacgtggtcgcgatcggggtgctcgccttcatctacacgacgctgcagctggtgcg 16050647 Query: 463 gcacggcatccggctcaccagcggccaggacctgcagggcaaggtcgtcctcctcgtcga 522 ||||||| | ||||||||| ||||||||||||||||||||||||||| | | |||||||| Sbjct: 16050646 gcacggcgtacggctcaccggcggccaggacctgcagggcaaggtcgccgtactcgtcga 16050587 Query: 523 cttcgccggagatcaggt 540 |||||||||||||||||| Sbjct: 16050586 cttcgccggagatcaggt 16050569 Score = 79.8 bits (40), Expect = 2e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 603 aaggcgcggacaacatattcaccgactcatccgcagcttccatcagcatggcattctttg 662 |||||||||||||| | ||||||||||| || || || |||||||||||||| ||||| | Sbjct: 16048998 aaggcgcggacaacgtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcg 16048939 Query: 663 cgttcgtctgcctcgcgctagccgccctcatctcaggtttcaggctggccaa 714 | ||| |||||||||| || |||||||| |||| || |||| ||| ||||| Sbjct: 16048938 ccttcctctgcctcgccctctccgccctcgtctccggcttcaagctcgccaa 16048887