BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058j09 (1007 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060736.1| Oryza sativa (japonica cultivar-group) Os04g... 206 1e-49 emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 206 1e-49 emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 206 1e-49 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 206 1e-49 emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,... 206 1e-49 >ref|NM_001060736.1| Oryza sativa (japonica cultivar-group) Os04g0669200 (Os04g0669200) mRNA, complete cds Length = 821 Score = 206 bits (104), Expect = 1e-49 Identities = 161/180 (89%) Strand = Plus / Plus Query: 210 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 269 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 133 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 192 Query: 270 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgc 329 |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| || Sbjct: 193 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 252 Query: 330 ccgagcatacgacgtcgcggcgcggaacctccgcgggcagctcgccaagaccaacttccc 389 || || ||||||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct: 253 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 312 Score = 176 bits (89), Expect = 1e-40 Identities = 153/173 (88%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 544 ccggcgcctgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggatgac 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 506 ccggcgcccgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggacgac 565 Query: 604 gacgacgacgcttccaccgtccggtctcgc---gcgccgttcgacctcaacctcccaccg 660 | ||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct: 566 gccgacgacgcctccaccgttcggtcccgcgtggcggcgttcgacctcaacctcccgccg 625 Query: 661 ccgccggacagggacca---cgaactgtgcacggagctacggctctggtagga 710 |||| |||| ||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 626 ccgctggaccgggaccacgtcgacctgtgcacggacctgcggctctgatagga 678 >emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 206 bits (104), Expect = 1e-49 Identities = 161/180 (89%) Strand = Plus / Minus Query: 210 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 269 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 84521 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 84462 Query: 270 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgc 329 |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| || Sbjct: 84461 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 84402 Query: 330 ccgagcatacgacgtcgcggcgcggaacctccgcgggcagctcgccaagaccaacttccc 389 || || ||||||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct: 84401 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 84342 Score = 176 bits (89), Expect = 1e-40 Identities = 153/173 (88%), Gaps = 6/173 (3%) Strand = Plus / Minus Query: 544 ccggcgcctgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggatgac 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 84148 ccggcgcccgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggacgac 84089 Query: 604 gacgacgacgcttccaccgtccggtctcgc---gcgccgttcgacctcaacctcccaccg 660 | ||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct: 84088 gccgacgacgcctccaccgttcggtcccgcgtggcggcgttcgacctcaacctcccgccg 84029 Query: 661 ccgccggacagggacca---cgaactgtgcacggagctacggctctggtagga 710 |||| |||| ||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 84028 ccgctggaccgggaccacgtcgacctgtgcacggacctgcggctctgatagga 83976 >emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 206 bits (104), Expect = 1e-49 Identities = 161/180 (89%) Strand = Plus / Minus Query: 210 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 269 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 18891 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 18832 Query: 270 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgc 329 |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| || Sbjct: 18831 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 18772 Query: 330 ccgagcatacgacgtcgcggcgcggaacctccgcgggcagctcgccaagaccaacttccc 389 || || ||||||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct: 18771 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 18712 Score = 176 bits (89), Expect = 1e-40 Identities = 153/173 (88%), Gaps = 6/173 (3%) Strand = Plus / Minus Query: 544 ccggcgcctgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggatgac 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 18518 ccggcgcccgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggacgac 18459 Query: 604 gacgacgacgcttccaccgtccggtctcgc---gcgccgttcgacctcaacctcccaccg 660 | ||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct: 18458 gccgacgacgcctccaccgttcggtcccgcgtggcggcgttcgacctcaacctcccgccg 18399 Query: 661 ccgccggacagggacca---cgaactgtgcacggagctacggctctggtagga 710 |||| |||| ||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 18398 ccgctggaccgggaccacgtcgacctgtgcacggacctgcggctctgatagga 18346 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 206 bits (104), Expect = 1e-49 Identities = 161/180 (89%) Strand = Plus / Minus Query: 210 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 269 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 34168213 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 34168154 Query: 270 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgc 329 |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| || Sbjct: 34168153 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 34168094 Query: 330 ccgagcatacgacgtcgcggcgcggaacctccgcgggcagctcgccaagaccaacttccc 389 || || ||||||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct: 34168093 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 34168034 Score = 176 bits (89), Expect = 1e-40 Identities = 153/173 (88%), Gaps = 6/173 (3%) Strand = Plus / Minus Query: 544 ccggcgcctgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggatgac 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 34167840 ccggcgcccgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggacgac 34167781 Query: 604 gacgacgacgcttccaccgtccggtctcgc---gcgccgttcgacctcaacctcccaccg 660 | ||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct: 34167780 gccgacgacgcctccaccgttcggtcccgcgtggcggcgttcgacctcaacctcccgccg 34167721 Query: 661 ccgccggacagggacca---cgaactgtgcacggagctacggctctggtagga 710 |||| |||| ||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 34167720 ccgctggaccgggaccacgtcgacctgtgcacggacctgcggctctgatagga 34167668 Score = 97.6 bits (49), Expect = 8e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 226 ggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccgcgacccggccaagcgc 285 |||||| ||||||| |||||||| | | |||||||||||||||||||||||||| | Sbjct: 30973283 ggcgtgaggaagcgcccgtggggcaggtacgcggcggagatccgcgacccggccaggaag 30973342 Query: 286 gcgcgcgtctggctcggcaccttcgactccgccgaggccgc 326 ||||| || |||||||||||||||||| ||||||||||||| Sbjct: 30973343 gcgcgggtgtggctcggcaccttcgacaccgccgaggccgc 30973383 Score = 89.7 bits (45), Expect = 2e-14 Identities = 98/115 (85%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 220 tacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccgcgacccggcc 279 |||||||| ||| || ||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 27345743 tacaggggggtgaggcagcggccgtggggcaagttcgcggcggagatccgggaccccgcc 27345684 Query: 280 aagc---gcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgccc 331 ||| |||||||||| ||||||||||| |||||| ||||||||| |||||||| Sbjct: 27345683 aagaacggcgcgcgcgtgtggctcggcacgttcgacaccgccgaggacgccgccc 27345629 >emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 206 bits (104), Expect = 1e-49 Identities = 161/180 (89%) Strand = Plus / Minus Query: 210 ggcgccgcggtacaggggcgtgcggaagcggccgtgggggcgcttcgcggcggagatccg 269 ||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 79595 ggcgccgaggtacaggggggtgaggaagcggccgtgggggaggttcgcggcggagatccg 79536 Query: 270 cgacccggccaagcgcgcgcgcgtctggctcggcaccttcgactccgccgaggccgccgc 329 |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| || Sbjct: 79535 ggacccggcgaagcgggcgcgcgtgtggctcggcacctacgactccgccgaggccgcggc 79476 Query: 330 ccgagcatacgacgtcgcggcgcggaacctccgcgggcagctcgccaagaccaacttccc 389 || || ||||||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct: 79475 gcgggcctacgacgtcgccgcgcggaacctccgcggcccgctcgccagaaccaacttccc 79416 Score = 176 bits (89), Expect = 1e-40 Identities = 153/173 (88%), Gaps = 6/173 (3%) Strand = Plus / Minus Query: 544 ccggcgcctgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggatgac 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79222 ccggcgcccgacgccggctgccacagcgactgcgcctcgtcggcctccgtcgtggacgac 79163 Query: 604 gacgacgacgcttccaccgtccggtctcgc---gcgccgttcgacctcaacctcccaccg 660 | ||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||| ||| Sbjct: 79162 gccgacgacgcctccaccgttcggtcccgcgtggcggcgttcgacctcaacctcccgccg 79103 Query: 661 ccgccggacagggacca---cgaactgtgcacggagctacggctctggtagga 710 |||| |||| ||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 79102 ccgctggaccgggaccacgtcgacctgtgcacggacctgcggctctgatagga 79050