BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058f19 (1118 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059437.1| Oryza sativa (japonica cultivar-group) Os04g... 392 e-105 dbj|AK108515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-105 gb|AY104218.1| Zea mays PCO106883 mRNA sequence 178 3e-41 emb|CR855182.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 145 4e-31 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31 >ref|NM_001059437.1| Oryza sativa (japonica cultivar-group) Os04g0445400 (Os04g0445400) mRNA, complete cds Length = 1128 Score = 392 bits (198), Expect = e-105 Identities = 423/498 (84%) Strand = Plus / Plus Query: 258 gatggcggcggaggcgggcaggcgggtggacgtggccaacctcttctccctcggcgacga 317 |||||||||||||||||| | ||| ||| ||||||| | || || ||||||| ||||| Sbjct: 214 gatggcggcggaggcggggatgcgcgtgaacgtggcgagtctgctcgccctcggggacga 273 Query: 318 cctcgtgggcgtgctccgcggcagcaaggacggcgacgccctcgcgcaggcctgcggcgg 377 | ||||| ||||| ||| || ||||||||||| ||||||||||||||||||| ||| Sbjct: 274 caccgtggagttgctcggcgagaggaaggacggcgaggccctcgcgcaggcctgcgccgg 333 Query: 378 cgcccgaatgctgcggtccgcttgccgctcggagtccggcgacctcgagctccaattgaa 437 || || |||||||| ||||| |||||||||||||||| |||||||||| | ||| |||| Sbjct: 334 ggcgcggatgctgcgttccgcctgccgctcggagtccgacgacctcgaggtgcaaatgaa 393 Query: 438 agagtatcaggaaaaaataaactcctgcaaggaaaagatagacagagcaaaagctgaaac 497 ||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||| Sbjct: 394 agagtatcaggaaaaaataaagtcctgcaaagaaaagatagaaaagacaaaatctgaaac 453 Query: 498 aattgctgatgatgaactgaacgcactgcaaaatgagatggaagagaaactccaagatga 557 |||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||| Sbjct: 454 aattgccgatgatgaactgaatgctctgcaaaaagagatggaggagaaacttcaagatga 513 Query: 558 gcaacagcttcgtcaagacttaagagcagtacgtgatgagcttgataacctagaccgtca 617 ||||| ||||| || || ||||||||||||||||||||||||||||||||||| | || Sbjct: 514 gcaacgccttcgccaggatttaagagcagtacgtgatgagcttgataacctagatagcca 573 Query: 618 aagggcttctatagaagaaaggaaggatgctatcaagaaaaaggagaaagacatgatgaa 677 ||| | |||||||||| |||||||||| ||| | | ||| | ||| || || |||||||| Sbjct: 574 aagagattctatagaacaaaggaaggaagctctaaggaagatggaaaaggaaatgatgaa 633 Query: 678 ggcacaaaatacgctttccatgtgcgtttcagtaacaaatatcatgccagattttgaaga 737 |||||||||| |||||||||||| || ||||| || || ||||||||| |||||||||| Sbjct: 634 agcacaaaatatgctttccatgtgtgtgtcagtgaccaaaatcatgccaaattttgaaga 693 Query: 738 ccaggataagatttctgg 755 | |||| ||||| ||||| Sbjct: 694 caaggacaagatctctgg 711 Score = 117 bits (59), Expect = 1e-22 Identities = 89/99 (89%) Strand = Plus / Plus Query: 919 atattgttgacaagaacatgaagaagctagagaagttcgagtttgagaagacaacgccac 978 |||||||||| |||||||||||||| ||||||| |||||||||||| ||||| ||||| | Sbjct: 714 atattgttgataagaacatgaagaaactagagaggttcgagtttgacaagacgacgcccc 773 Query: 979 cagttgagatctgcaacaagctttggaagatgatttaga 1017 | ||||| ||||||||||| |||||||||||| |||||| Sbjct: 774 ctgttgatatctgcaacaacctttggaagatggtttaga 812 >dbj|AK108515.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A09, full insert sequence Length = 1128 Score = 392 bits (198), Expect = e-105 Identities = 423/498 (84%) Strand = Plus / Plus Query: 258 gatggcggcggaggcgggcaggcgggtggacgtggccaacctcttctccctcggcgacga 317 |||||||||||||||||| | ||| ||| ||||||| | || || ||||||| ||||| Sbjct: 214 gatggcggcggaggcggggatgcgcgtgaacgtggcgagtctgctcgccctcggggacga 273 Query: 318 cctcgtgggcgtgctccgcggcagcaaggacggcgacgccctcgcgcaggcctgcggcgg 377 | ||||| ||||| ||| || ||||||||||| ||||||||||||||||||| ||| Sbjct: 274 caccgtggagttgctcggcgagaggaaggacggcgaggccctcgcgcaggcctgcgccgg 333 Query: 378 cgcccgaatgctgcggtccgcttgccgctcggagtccggcgacctcgagctccaattgaa 437 || || |||||||| ||||| |||||||||||||||| |||||||||| | ||| |||| Sbjct: 334 ggcgcggatgctgcgttccgcctgccgctcggagtccgacgacctcgaggtgcaaatgaa 393 Query: 438 agagtatcaggaaaaaataaactcctgcaaggaaaagatagacagagcaaaagctgaaac 497 ||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||| Sbjct: 394 agagtatcaggaaaaaataaagtcctgcaaagaaaagatagaaaagacaaaatctgaaac 453 Query: 498 aattgctgatgatgaactgaacgcactgcaaaatgagatggaagagaaactccaagatga 557 |||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||| Sbjct: 454 aattgccgatgatgaactgaatgctctgcaaaaagagatggaggagaaacttcaagatga 513 Query: 558 gcaacagcttcgtcaagacttaagagcagtacgtgatgagcttgataacctagaccgtca 617 ||||| ||||| || || ||||||||||||||||||||||||||||||||||| | || Sbjct: 514 gcaacgccttcgccaggatttaagagcagtacgtgatgagcttgataacctagatagcca 573 Query: 618 aagggcttctatagaagaaaggaaggatgctatcaagaaaaaggagaaagacatgatgaa 677 ||| | |||||||||| |||||||||| ||| | | ||| | ||| || || |||||||| Sbjct: 574 aagagattctatagaacaaaggaaggaagctctaaggaagatggaaaaggaaatgatgaa 633 Query: 678 ggcacaaaatacgctttccatgtgcgtttcagtaacaaatatcatgccagattttgaaga 737 |||||||||| |||||||||||| || ||||| || || ||||||||| |||||||||| Sbjct: 634 agcacaaaatatgctttccatgtgtgtgtcagtgaccaaaatcatgccaaattttgaaga 693 Query: 738 ccaggataagatttctgg 755 | |||| ||||| ||||| Sbjct: 694 caaggacaagatctctgg 711 Score = 117 bits (59), Expect = 1e-22 Identities = 89/99 (89%) Strand = Plus / Plus Query: 919 atattgttgacaagaacatgaagaagctagagaagttcgagtttgagaagacaacgccac 978 |||||||||| |||||||||||||| ||||||| |||||||||||| ||||| ||||| | Sbjct: 714 atattgttgataagaacatgaagaaactagagaggttcgagtttgacaagacgacgcccc 773 Query: 979 cagttgagatctgcaacaagctttggaagatgatttaga 1017 | ||||| ||||||||||| |||||||||||| |||||| Sbjct: 774 ctgttgatatctgcaacaacctttggaagatggtttaga 812 >gb|AY104218.1| Zea mays PCO106883 mRNA sequence Length = 710 Score = 178 bits (90), Expect = 3e-41 Identities = 264/322 (81%) Strand = Plus / Plus Query: 436 aaagagtatcaggaaaaaataaactcctgcaaggaaaagatagacagagcaaaagctgaa 495 ||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| Sbjct: 357 aaagagtatcaggaaaaaatacactcctgcaaagaaaagattgacaaagcaaaggctgaa 416 Query: 496 acaattgctgatgatgaactgaacgcactgcaaaatgagatggaagagaaactccaagat 555 || ||| |||| |||||||| || ||||| |||| |||||||||| ||||| || || Sbjct: 417 accattactgacgatgaactcaatgcactacaaagcaagatggaagaaaaactgcaggaa 476 Query: 556 gagcaacagcttcgtcaagacttaagagcagtacgtgatgagcttgataacctagaccgt 615 ||| | |||||||| ||||| ||||||| ||| ||||||||||||| ||||||| | Sbjct: 477 gagaagcagcttcgccaagagttaagagtgttacatgatgagcttgatgacctagaaagc 536 Query: 616 caaagggcttctatagaagaaaggaaggatgctatcaagaaaaaggagaaagacatgatg 675 ||||| ||||||| ||||||| ||||| ||| ||||||| || ||||||||| | Sbjct: 537 caaagactttctataaaagaaagaaaggacgctgtcaagaagaaaaagaaagacacacag 596 Query: 676 aaggcacaaaatacgctttccatgtgcgtttcagtaacaaatatcatgccagattttgaa 735 || ||| || ||||||||||||||| | || || ||||||||||| ||| |||| ||| Sbjct: 597 aaagcagaacgtacgctttccatgtgtctgtcggttacaaatatcatcccaaatttggaa 656 Query: 736 gaccaggataagatttctggat 757 |||||||||||| |||| |||| Sbjct: 657 gaccaggataaggtttcaggat 678 >emb|CR855182.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140O07, complete sequence Length = 78789 Score = 145 bits (73), Expect = 4e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 438 agagtatcaggaaaaaataaactcctgcaaggaaaagatagacagagcaaaagctgaaac 497 ||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||| Sbjct: 19536 agagtatcaggaaaaaataaagtcctgcaaagaaaagatagaaaagacaaaatctgaaac 19595 Query: 498 aattgctgatgatgaactgaacgcactgcaaaatgagatggaagagaaactccaagatga 557 |||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||| Sbjct: 19596 aattgccgatgatgaactgaatgctctgcaaaaagagatggaggagaaacttcaagatga 19655 Query: 558 gcaac 562 ||||| Sbjct: 19656 gcaac 19660 Score = 129 bits (65), Expect = 3e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 901 gtccttagtttcaatcagatattgttgacaagaacatgaagaagctagagaagttcgagt 960 ||||||| |||| |||||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 20571 gtccttaatttcgttcagatattgttgataagaacatgaagaaactagagaggttcgagt 20630 Query: 961 ttgagaagacaacgccaccagttgagatctgcaacaagctttggaagatgatttaga 1017 |||| ||||| ||||| || ||||| ||||||||||| |||||||||||| |||||| Sbjct: 20631 ttgacaagacgacgccccctgttgatatctgcaacaacctttggaagatggtttaga 20687 Score = 115 bits (58), Expect = 4e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 258 gatggcggcggaggcgggcaggcgggtggacgtggccaacctcttctccctcggcgacga 317 |||||||||||||||||| | ||| ||| ||||||| | || || ||||||| ||||| Sbjct: 18519 gatggcggcggaggcggggatgcgcgtgaacgtggcgagtctgctcgccctcggggacga 18578 Query: 318 cctcgtgggcgtgctccgcggcagcaaggacggcgacgccctcgcgcaggcctgcggcgg 377 | ||||| ||||| ||| || ||||||||||| ||||||||||||||||||| ||| Sbjct: 18579 caccgtggagttgctcggcgagaggaaggacggcgaggccctcgcgcaggcctgcgccgg 18638 Query: 378 cgcccgaatgctgcggtccgcttgccgctcggagtccggcgacctcgagctccaattgaa 437 || || |||||||| ||||| |||||||||||||||| |||||||||| | ||| |||| Sbjct: 18639 ggcgcggatgctgcgttccgcctgccgctcggagtccgacgacctcgaggtgcaaatgaa 18698 Query: 438 ag 439 || Sbjct: 18699 ag 18700 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 684 aaatacgctttccatgtgcgtttcagtaacaaatatcatgccagattttgaagaccagga 743 ||||| |||||||||||| || ||||| || || ||||||||| ||||||||||| |||| Sbjct: 20346 aaatatgctttccatgtgtgtgtcagtgaccaaaatcatgccaaattttgaagacaagga 20405 Query: 744 taagatttctggatgtatcctttcaattt 772 ||||| ||||| |||||||||||||||| Sbjct: 20406 caagatctctggttgtatcctttcaattt 20434 Score = 77.8 bits (39), Expect = 9e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 582 agcagtacgtgatgagcttgataacctagaccgtcaaagggcttctatagaagaaaggaa 641 |||||||||||||||||||||||||||||| | ||||| | |||||||||| ||||||| Sbjct: 19769 agcagtacgtgatgagcttgataacctagatagccaaagagattctatagaacaaaggaa 19828 Query: 642 gga 644 ||| Sbjct: 19829 gga 19831 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 145 bits (73), Expect = 4e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 438 agagtatcaggaaaaaataaactcctgcaaggaaaagatagacagagcaaaagctgaaac 497 ||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||| Sbjct: 22183665 agagtatcaggaaaaaataaagtcctgcaaagaaaagatagaaaagacaaaatctgaaac 22183724 Query: 498 aattgctgatgatgaactgaacgcactgcaaaatgagatggaagagaaactccaagatga 557 |||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||| Sbjct: 22183725 aattgccgatgatgaactgaatgctctgcaaaaagagatggaggagaaacttcaagatga 22183784 Query: 558 gcaac 562 ||||| Sbjct: 22183785 gcaac 22183789 Score = 129 bits (65), Expect = 3e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 901 gtccttagtttcaatcagatattgttgacaagaacatgaagaagctagagaagttcgagt 960 ||||||| |||| |||||||||||||| |||||||||||||| ||||||| |||||||| Sbjct: 22184700 gtccttaatttcgttcagatattgttgataagaacatgaagaaactagagaggttcgagt 22184759 Query: 961 ttgagaagacaacgccaccagttgagatctgcaacaagctttggaagatgatttaga 1017 |||| ||||| ||||| || ||||| ||||||||||| |||||||||||| |||||| Sbjct: 22184760 ttgacaagacgacgccccctgttgatatctgcaacaacctttggaagatggtttaga 22184816 Score = 115 bits (58), Expect = 4e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 258 gatggcggcggaggcgggcaggcgggtggacgtggccaacctcttctccctcggcgacga 317 |||||||||||||||||| | ||| ||| ||||||| | || || ||||||| ||||| Sbjct: 22182648 gatggcggcggaggcggggatgcgcgtgaacgtggcgagtctgctcgccctcggggacga 22182707 Query: 318 cctcgtgggcgtgctccgcggcagcaaggacggcgacgccctcgcgcaggcctgcggcgg 377 | ||||| ||||| ||| || ||||||||||| ||||||||||||||||||| ||| Sbjct: 22182708 caccgtggagttgctcggcgagaggaaggacggcgaggccctcgcgcaggcctgcgccgg 22182767 Query: 378 cgcccgaatgctgcggtccgcttgccgctcggagtccggcgacctcgagctccaattgaa 437 || || |||||||| ||||| |||||||||||||||| |||||||||| | ||| |||| Sbjct: 22182768 ggcgcggatgctgcgttccgcctgccgctcggagtccgacgacctcgaggtgcaaatgaa 22182827 Query: 438 ag 439 || Sbjct: 22182828 ag 22182829 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 684 aaatacgctttccatgtgcgtttcagtaacaaatatcatgccagattttgaagaccagga 743 ||||| |||||||||||| || ||||| || || ||||||||| ||||||||||| |||| Sbjct: 22184475 aaatatgctttccatgtgtgtgtcagtgaccaaaatcatgccaaattttgaagacaagga 22184534 Query: 744 taagatttctggatgtatcctttcaattt 772 ||||| ||||| |||||||||||||||| Sbjct: 22184535 caagatctctggttgtatcctttcaattt 22184563 Score = 77.8 bits (39), Expect = 9e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 582 agcagtacgtgatgagcttgataacctagaccgtcaaagggcttctatagaagaaaggaa 641 |||||||||||||||||||||||||||||| | ||||| | |||||||||| ||||||| Sbjct: 22183898 agcagtacgtgatgagcttgataacctagatagccaaagagattctatagaacaaaggaa 22183957 Query: 642 gga 644 ||| Sbjct: 22183958 gga 22183960