BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058f15 (1922 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-31 dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-31 dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-31 emb|AM461526.2| Vitis vinifera contig VV78X091722.8, whole genom... 90 4e-14 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 147 bits (74), Expect = 2e-31 Identities = 104/114 (91%) Strand = Plus / Minus Query: 750 cagtttgataagtacgctaaaggggttgaaaaggagaaagcttcctattcacactacaac 809 |||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 19274493 cagtttgatatatatgctaaagaggttgaaaaggagaaagcttccttctcacactacaac 19274434 Query: 810 attctaccccttaatatttctggtcccacacaaccagtaatggaaattcctgag 863 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19274433 attctaccccttaatatttctggtcagcgacaaccagtaatggaaattcctgag 19274380 Score = 127 bits (64), Expect = 2e-25 Identities = 102/114 (89%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 1211 aattccaaacaatgccaacacacaacaac---agcttctttatatagggctgtatttgct 1267 |||||||||| ||||| ||||||||||| || ||||||| |||||| |||||||||| Sbjct: 19273007 aattccaaacgatgcctccacacaacaacctgagattctttacatagggttgtatttgct 19272948 Query: 1268 gatttggggtgaagcttctaatgttcgctttatgcctgaatgcctttgttatat 1321 ||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19272947 gatctggggtgaagcttctaatgttcgctttatgcctgaatgtatttgttatat 19272894 Score = 127 bits (64), Expect = 2e-25 Identities = 91/100 (91%) Strand = Plus / Minus Query: 456 cggtttaccgcgttcgagaaggctcacactacggatccaaactcaagtggacgtggagtc 515 ||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||| Sbjct: 19277677 cggtttaccgcgttcgagaaggctcacaccatggatccaaactcaggtggacgaggagtt 19277618 Query: 516 cggcaattcaaaacgtatctgttgcataggctggaaaagg 555 |||||||||||||| || || |||||||||||||| |||| Sbjct: 19277617 cggcaattcaaaacatacctcttgcataggctggagaagg 19277578 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Minus Query: 1459 aggaagttgcaaggagtaaacgtggtactacaagccactcaaagtggagaaactatgatg 1518 |||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19271605 aggaagctgcaatgaataaacgtggtaggacaagccactcaaagtggagaaactatgatg 19271546 Query: 1519 acctgaatgaatacttttggt 1539 ||||||||||||||||||||| Sbjct: 19271545 acctgaatgaatacttttggt 19271525 Score = 121 bits (61), Expect = 1e-23 Identities = 99/111 (89%), Gaps = 3/111 (2%) Strand = Plus / Minus Query: 1002 cagaaaggcaatgtggagaatcaaaaggagcatttgattttgctgcttgccaacattgat 1061 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 19273419 cagaaaggcaatgttgagaatcagaaggagcatttgattttgctgcttgcaaatattgat 19273360 Query: 1062 atgagaaaaggggatggtaatgcccaccagggtgaaagacacaatcatgtg 1112 |||||||||||| | ||||||| |||| |||| ||||||||||||||| Sbjct: 19273359 atgagaaaaggg---gctaatgcctaccaaagtgacagacacaatcatgtg 19273312 Score = 107 bits (54), Expect = 2e-19 Identities = 72/78 (92%) Strand = Plus / Minus Query: 672 gagatgggtagatactatcagattgcgtctgtcctatatgatgtgctaaaaacagtggca 731 ||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 19274676 gagatggctagacactatcagattgcgtccgtcctatatgatgtgctaaaaaccgtgaca 19274617 Query: 732 cctgaaaaatctcacgct 749 |||||||||| ||||||| Sbjct: 19274616 cctgaaaaatttcacgct 19274599 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 381 ctcgcgcccatcgtccccatcctccgcaccgccaacgagatcgagcaggagaacccgcgc 440 ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 19278232 ctcgcccccatcgtccccatcctccgcgccgccaacgagatcgaggaggagaaccagcgc 19278173 Query: 441 gtcgcatacctctg 454 ||||| |||||||| Sbjct: 19278172 gtcgcctacctctg 19278159 Score = 101 bits (51), Expect = 1e-17 Identities = 105/123 (85%) Strand = Plus / Minus Query: 1332 atggcaaaggatttatatgacataatatctgatggaaaagattattttgagccacccgtt 1391 ||||||| |||||| |||||||| ||||||||| ||| | | ||||||| |||||| || Sbjct: 19271810 atggcaagggatttgtatgacatcatatctgatagaagacaagattttgatccacccttt 19271751 Query: 1392 cggtcagaggggatcgatgatgcatttctacagctggttattcaacccatatacaatgtt 1451 ||| |||||||| |||||||| ||||||||||| |||||||||||||| |||| |||| Sbjct: 19271750 cggcgagaggggagtgatgatgcctttctacagcttgttattcaacccatctacagtgtt 19271691 Query: 1452 atg 1454 ||| Sbjct: 19271690 atg 19271688 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 256 tgtcgcggccgcagccgtcgctgccgcggggcttctcgcgggcgctcaccatgcggccgg 315 ||||| |||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||| Sbjct: 19278354 tgtcggggccgcagccgtcgctgcggcggggcttgtcgagggcgttcaccatgaggccgg 19278295 Query: 316 agggctactcc 326 |||| |||||| Sbjct: 19278294 aggggtactcc 19278284 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 1142 cttgatgaagaaaatatttgaaaattacatttcttggtgccaatatctgcatttggagtc 1201 |||||||| |||||| |||||||| |||||||||||||||| |||| | ||||||||||| Sbjct: 19273154 cttgatgaggaaaatctttgaaaactacatttcttggtgccgatatttacatttggagtc 19273095 Query: 1202 aaacat 1207 |||||| Sbjct: 19273094 aaacat 19273089 >dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 147 bits (74), Expect = 2e-31 Identities = 104/114 (91%) Strand = Plus / Minus Query: 750 cagtttgataagtacgctaaaggggttgaaaaggagaaagcttcctattcacactacaac 809 |||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 94114 cagtttgatatatatgctaaagaggttgaaaaggagaaagcttccttctcacactacaac 94055 Query: 810 attctaccccttaatatttctggtcccacacaaccagtaatggaaattcctgag 863 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 94054 attctaccccttaatatttctggtcagcgacaaccagtaatggaaattcctgag 94001 Score = 127 bits (64), Expect = 2e-25 Identities = 102/114 (89%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 1211 aattccaaacaatgccaacacacaacaac---agcttctttatatagggctgtatttgct 1267 |||||||||| ||||| ||||||||||| || ||||||| |||||| |||||||||| Sbjct: 92628 aattccaaacgatgcctccacacaacaacctgagattctttacatagggttgtatttgct 92569 Query: 1268 gatttggggtgaagcttctaatgttcgctttatgcctgaatgcctttgttatat 1321 ||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92568 gatctggggtgaagcttctaatgttcgctttatgcctgaatgtatttgttatat 92515 Score = 127 bits (64), Expect = 2e-25 Identities = 91/100 (91%) Strand = Plus / Minus Query: 456 cggtttaccgcgttcgagaaggctcacactacggatccaaactcaagtggacgtggagtc 515 ||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||| Sbjct: 97298 cggtttaccgcgttcgagaaggctcacaccatggatccaaactcaggtggacgaggagtt 97239 Query: 516 cggcaattcaaaacgtatctgttgcataggctggaaaagg 555 |||||||||||||| || || |||||||||||||| |||| Sbjct: 97238 cggcaattcaaaacatacctcttgcataggctggagaagg 97199 Score = 121 bits (61), Expect = 1e-23 Identities = 76/81 (93%) Strand = Plus / Minus Query: 1459 aggaagttgcaaggagtaaacgtggtactacaagccactcaaagtggagaaactatgatg 1518 |||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 91226 aggaagctgcaatgaataaacgtggtaggacaagccactcaaagtggagaaactatgatg 91167 Query: 1519 acctgaatgaatacttttggt 1539 ||||||||||||||||||||| Sbjct: 91166 acctgaatgaatacttttggt 91146 Score = 121 bits (61), Expect = 1e-23 Identities = 99/111 (89%), Gaps = 3/111 (2%) Strand = Plus / Minus Query: 1002 cagaaaggcaatgtggagaatcaaaaggagcatttgattttgctgcttgccaacattgat 1061 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 93040 cagaaaggcaatgttgagaatcagaaggagcatttgattttgctgcttgcaaatattgat 92981 Query: 1062 atgagaaaaggggatggtaatgcccaccagggtgaaagacacaatcatgtg 1112 |||||||||||| | ||||||| |||| |||| ||||||||||||||| Sbjct: 92980 atgagaaaaggg---gctaatgcctaccaaagtgacagacacaatcatgtg 92933 Score = 107 bits (54), Expect = 2e-19 Identities = 72/78 (92%) Strand = Plus / Minus Query: 672 gagatgggtagatactatcagattgcgtctgtcctatatgatgtgctaaaaacagtggca 731 ||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 94297 gagatggctagacactatcagattgcgtccgtcctatatgatgtgctaaaaaccgtgaca 94238 Query: 732 cctgaaaaatctcacgct 749 |||||||||| ||||||| Sbjct: 94237 cctgaaaaatttcacgct 94220 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 381 ctcgcgcccatcgtccccatcctccgcaccgccaacgagatcgagcaggagaacccgcgc 440 ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 97853 ctcgcccccatcgtccccatcctccgcgccgccaacgagatcgaggaggagaaccagcgc 97794 Query: 441 gtcgcatacctctg 454 ||||| |||||||| Sbjct: 97793 gtcgcctacctctg 97780 Score = 101 bits (51), Expect = 1e-17 Identities = 105/123 (85%) Strand = Plus / Minus Query: 1332 atggcaaaggatttatatgacataatatctgatggaaaagattattttgagccacccgtt 1391 ||||||| |||||| |||||||| ||||||||| ||| | | ||||||| |||||| || Sbjct: 91431 atggcaagggatttgtatgacatcatatctgatagaagacaagattttgatccacccttt 91372 Query: 1392 cggtcagaggggatcgatgatgcatttctacagctggttattcaacccatatacaatgtt 1451 ||| |||||||| |||||||| ||||||||||| |||||||||||||| |||| |||| Sbjct: 91371 cggcgagaggggagtgatgatgcctttctacagcttgttattcaacccatctacagtgtt 91312 Query: 1452 atg 1454 ||| Sbjct: 91311 atg 91309 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 256 tgtcgcggccgcagccgtcgctgccgcggggcttctcgcgggcgctcaccatgcggccgg 315 ||||| |||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||| Sbjct: 97975 tgtcggggccgcagccgtcgctgcggcggggcttgtcgagggcgttcaccatgaggccgg 97916 Query: 316 agggctactcc 326 |||| |||||| Sbjct: 97915 aggggtactcc 97905 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 1142 cttgatgaagaaaatatttgaaaattacatttcttggtgccaatatctgcatttggagtc 1201 |||||||| |||||| |||||||| |||||||||||||||| |||| | ||||||||||| Sbjct: 92775 cttgatgaggaaaatctttgaaaactacatttcttggtgccgatatttacatttggagtc 92716 Query: 1202 aaacat 1207 |||||| Sbjct: 92715 aaacat 92710 >dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 147 bits (74), Expect = 2e-31 Identities = 104/114 (91%) Strand = Plus / Minus Query: 750 cagtttgataagtacgctaaaggggttgaaaaggagaaagcttcctattcacactacaac 809 |||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 2498 cagtttgatatatatgctaaagaggttgaaaaggagaaagcttccttctcacactacaac 2439 Query: 810 attctaccccttaatatttctggtcccacacaaccagtaatggaaattcctgag 863 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2438 attctaccccttaatatttctggtcagcgacaaccagtaatggaaattcctgag 2385 Score = 127 bits (64), Expect = 2e-25 Identities = 102/114 (89%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 1211 aattccaaacaatgccaacacacaacaac---agcttctttatatagggctgtatttgct 1267 |||||||||| ||||| ||||||||||| || ||||||| |||||| |||||||||| Sbjct: 1012 aattccaaacgatgcctccacacaacaacctgagattctttacatagggttgtatttgct 953 Query: 1268 gatttggggtgaagcttctaatgttcgctttatgcctgaatgcctttgttatat 1321 ||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 952 gatctggggtgaagcttctaatgttcgctttatgcctgaatgtatttgttatat 899 Score = 127 bits (64), Expect = 2e-25 Identities = 91/100 (91%) Strand = Plus / Minus Query: 456 cggtttaccgcgttcgagaaggctcacactacggatccaaactcaagtggacgtggagtc 515 ||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||| Sbjct: 5682 cggtttaccgcgttcgagaaggctcacaccatggatccaaactcaggtggacgaggagtt 5623 Query: 516 cggcaattcaaaacgtatctgttgcataggctggaaaagg 555 |||||||||||||| || || |||||||||||||| |||| Sbjct: 5622 cggcaattcaaaacatacctcttgcataggctggagaagg 5583 Score = 121 bits (61), Expect = 1e-23 Identities = 99/111 (89%), Gaps = 3/111 (2%) Strand = Plus / Minus Query: 1002 cagaaaggcaatgtggagaatcaaaaggagcatttgattttgctgcttgccaacattgat 1061 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 1424 cagaaaggcaatgttgagaatcagaaggagcatttgattttgctgcttgcaaatattgat 1365 Query: 1062 atgagaaaaggggatggtaatgcccaccagggtgaaagacacaatcatgtg 1112 |||||||||||| | ||||||| |||| |||| ||||||||||||||| Sbjct: 1364 atgagaaaaggg---gctaatgcctaccaaagtgacagacacaatcatgtg 1317 Score = 107 bits (54), Expect = 2e-19 Identities = 72/78 (92%) Strand = Plus / Minus Query: 672 gagatgggtagatactatcagattgcgtctgtcctatatgatgtgctaaaaacagtggca 731 ||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 2681 gagatggctagacactatcagattgcgtccgtcctatatgatgtgctaaaaaccgtgaca 2622 Query: 732 cctgaaaaatctcacgct 749 |||||||||| ||||||| Sbjct: 2621 cctgaaaaatttcacgct 2604 Score = 107 bits (54), Expect = 2e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 381 ctcgcgcccatcgtccccatcctccgcaccgccaacgagatcgagcaggagaacccgcgc 440 ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 6237 ctcgcccccatcgtccccatcctccgcgccgccaacgagatcgaggaggagaaccagcgc 6178 Query: 441 gtcgcatacctctg 454 ||||| |||||||| Sbjct: 6177 gtcgcctacctctg 6164 Score = 85.7 bits (43), Expect = 6e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 256 tgtcgcggccgcagccgtcgctgccgcggggcttctcgcgggcgctcaccatgcggccgg 315 ||||| |||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||| Sbjct: 6359 tgtcggggccgcagccgtcgctgcggcggggcttgtcgagggcgttcaccatgaggccgg 6300 Query: 316 agggctactcc 326 |||| |||||| Sbjct: 6299 aggggtactcc 6289 Score = 83.8 bits (42), Expect = 2e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 1142 cttgatgaagaaaatatttgaaaattacatttcttggtgccaatatctgcatttggagtc 1201 |||||||| |||||| |||||||| |||||||||||||||| |||| | ||||||||||| Sbjct: 1159 cttgatgaggaaaatctttgaaaactacatttcttggtgccgatatttacatttggagtc 1100 Query: 1202 aaacat 1207 |||||| Sbjct: 1099 aaacat 1094 >emb|AM461526.2| Vitis vinifera contig VV78X091722.8, whole genome shotgun sequence Length = 33862 Score = 89.7 bits (45), Expect = 4e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 1240 agcttctttatatagggctgtatttgctgatttggggtgaagcttctaatgttcgcttta 1299 |||||||||| || ||||| ||| | || ||||||||||||||||| |||||||| |||| Sbjct: 31128 agcttctttacattgggctttatctcctcatttggggtgaagcttcaaatgttcgattta 31187 Query: 1300 tgcctgaatgcctttgttatatttt 1324 ||||||||||| |||| |||||||| Sbjct: 31188 tgcctgaatgcatttgctatatttt 31212