BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf058c22 (1016 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK120159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110 ref|NM_001067921.1| Oryza sativa (japonica cultivar-group) Os08g... 385 e-103 dbj|AK067289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103 gb|AY553197.1| Aegilops geniculata clone Ucc1 amplified polymorp... 274 7e-70 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 246 1e-61 >dbj|AK120159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030H09, full insert sequence Length = 1854 Score = 406 bits (205), Expect = e-110 Identities = 329/369 (89%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 648 tactaatatcttgtgctttgataggtagaagcaccatggggctcttaggtatgatgggcg 707 ||||||| | ||||||||||||||||||| ||| ||||||||||||||||||| |||||| Sbjct: 143 tactaattttttgtgctttgataggtagacgcatcatggggctcttaggtatggtgggcg 202 Query: 708 actcgttcggttgctcagctatcggcgagcggctcgtctccgccgcaagggatggagaca 767 |||| |||||||||||||||| || |||||||| ||||| || |||||||||||||||| Sbjct: 203 actcattcggttgctcagctactggtgagcggcttgtctctgctgcaagggatggagaca 262 Query: 768 tccaagaggctagggccctcttggagcttaacccccggcttgcacggtactcgacgttcg 827 |||| ||||||| |||||| ||||||||||||||||| ||||| ||||| || ||||| | Sbjct: 263 tccaggaggctatggccctgttggagcttaacccccgacttgcgcggtattcaacgtttg 322 Query: 828 ggatccggaactcgcccctccattactcggcggcgaagggccactgtgagattgtttctc 887 ||||||||||||| ||||| |||||||| || || ||||||||| |||||||||||||| Sbjct: 323 ggatccggaactcaccccttcattactcagcagcaaagggccaccatgagattgtttctc 382 Query: 888 tcttaatcgaatccggcgtcgatatcaaccttaggaactgcggaggacagactgctctga 947 || |||| || || || || |||||||||| ||||||||| |||||||||||||||| | Sbjct: 383 tcctaattgagtctggtgttgatatcaaccccaggaactgcagaggacagactgctctaa 442 Query: 948 tgcaagcttgtctatatggtcattggaaagttgtacagattctagttcttcttaaagcat 1007 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | Sbjct: 443 tgcaagcttgtctatatggtcattggaaagttgtacagatcctagttctttttaaagc-t 501 Query: 1008 aatattcac 1016 ||||||||| Sbjct: 502 aatattcac 510 >ref|NM_001067921.1| Oryza sativa (japonica cultivar-group) Os08g0258200 (Os08g0258200) mRNA, complete cds Length = 1758 Score = 385 bits (194), Expect = e-103 Identities = 309/346 (89%), Gaps = 1/346 (0%) Strand = Plus / Plus Query: 671 ggtagaagcaccatggggctcttaggtatgatgggcgactcgttcggttgctcagctatc 730 |||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 92 ggtagacgcatcatggggctcttaggtatggtgggcgactcattcggttgctcagctact 151 Query: 731 ggcgagcggctcgtctccgccgcaagggatggagacatccaagaggctagggccctcttg 790 || |||||||| ||||| || |||||||||||||||||||| ||||||| |||||| ||| Sbjct: 152 ggtgagcggcttgtctctgctgcaagggatggagacatccaggaggctatggccctgttg 211 Query: 791 gagcttaacccccggcttgcacggtactcgacgttcgggatccggaactcgcccctccat 850 |||||||||||||| ||||| ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 212 gagcttaacccccgacttgcgcggtattcaacgtttgggatccggaactcaccccttcat 271 Query: 851 tactcggcggcgaagggccactgtgagattgtttctctcttaatcgaatccggcgtcgat 910 ||||| || || ||||||||| |||||||||||||||| |||| || || || || ||| Sbjct: 272 tactcagcagcaaagggccaccatgagattgtttctctcctaattgagtctggtgttgat 331 Query: 911 atcaaccttaggaactgcggaggacagactgctctgatgcaagcttgtctatatggtcat 970 |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 332 atcaacctcaggaactgcagaggacagactgctctaatgcaagcttgtctatatggtcat 391 Query: 971 tggaaagttgtacagattctagttcttcttaaagcataatattcac 1016 ||||||||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 392 tggaaagttgtacagatcctagttctttttaaagc-taatattcac 436 >dbj|AK067289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103K22, full insert sequence Length = 1759 Score = 385 bits (194), Expect = e-103 Identities = 309/346 (89%), Gaps = 1/346 (0%) Strand = Plus / Plus Query: 671 ggtagaagcaccatggggctcttaggtatgatgggcgactcgttcggttgctcagctatc 730 |||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 93 ggtagacgcatcatggggctcttaggtatggtgggcgactcattcggttgctcagctact 152 Query: 731 ggcgagcggctcgtctccgccgcaagggatggagacatccaagaggctagggccctcttg 790 || |||||||| ||||| || |||||||||||||||||||| ||||||| |||||| ||| Sbjct: 153 ggtgagcggcttgtctctgctgcaagggatggagacatccaggaggctatggccctgttg 212 Query: 791 gagcttaacccccggcttgcacggtactcgacgttcgggatccggaactcgcccctccat 850 |||||||||||||| ||||| ||||| || ||||| |||||||||||||| ||||| ||| Sbjct: 213 gagcttaacccccgacttgcgcggtattcaacgtttgggatccggaactcaccccttcat 272 Query: 851 tactcggcggcgaagggccactgtgagattgtttctctcttaatcgaatccggcgtcgat 910 ||||| || || ||||||||| |||||||||||||||| |||| || || || || ||| Sbjct: 273 tactcagcagcaaagggccaccatgagattgtttctctcctaattgagtctggtgttgat 332 Query: 911 atcaaccttaggaactgcggaggacagactgctctgatgcaagcttgtctatatggtcat 970 |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 333 atcaacctcaggaactgcagaggacagactgctctaatgcaagcttgtctatatggtcat 392 Query: 971 tggaaagttgtacagattctagttcttcttaaagcataatattcac 1016 ||||||||||||||||| ||||||||| ||||||| |||||||||| Sbjct: 393 tggaaagttgtacagatcctagttctttttaaagc-taatattcac 437 >gb|AY553197.1| Aegilops geniculata clone Ucc1 amplified polymorphism S-SAP marker Length = 463 Score = 274 bits (138), Expect = 7e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 658 ttgtgctttgataggtagaagcaccatggggctcttaggtatgatgggcgactcgttcgg 717 |||||| ||||||||||||||||||||||| ||| ||||||| ||||| ||||| ||||| Sbjct: 158 ttgtgcattgataggtagaagcaccatgggactcctaggtataatgggtgactcattcgg 217 Query: 718 ttgctcagctatcggcgagcggctcgtctccgccgcaagggatggagacatccaagaggc 777 |||||||||| ||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 218 ctgctcagctaccggtgagcggcttgtctctgccgcaagggatggagacatccaggaggc 277 Query: 778 tagggccctcttggagcttaacccccggcttgcacggtactcgacgttcgggatccggaa 837 ||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 278 tagggccctattggagcttaacccccggcttgcacgatactcgacattcggtatccggaa 337 Query: 838 ctcgcccctccattactcggcggcgaagggccac 871 | | |||||||||||||||||||| ||||||||| Sbjct: 338 cacacccctccattactcggcggcaaagggccac 371 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 246 bits (124), Expect = 1e-61 Identities = 199/224 (88%) Strand = Plus / Minus Query: 648 tactaatatcttgtgctttgataggtagaagcaccatggggctcttaggtatgatgggcg 707 ||||||| | ||||||||||||||||||| ||| ||||||||||||||||||| |||||| Sbjct: 9626226 tactaattttttgtgctttgataggtagacgcatcatggggctcttaggtatggtgggcg 9626167 Query: 708 actcgttcggttgctcagctatcggcgagcggctcgtctccgccgcaagggatggagaca 767 |||| |||||||||||||||| || |||||||| ||||| || |||||||||||||||| Sbjct: 9626166 actcattcggttgctcagctactggtgagcggcttgtctctgctgcaagggatggagaca 9626107 Query: 768 tccaagaggctagggccctcttggagcttaacccccggcttgcacggtactcgacgttcg 827 |||| ||||||| |||||| ||||||||||||||||| ||||| ||||| || ||||| | Sbjct: 9626106 tccaggaggctatggccctgttggagcttaacccccgacttgcgcggtattcaacgtttg 9626047 Query: 828 ggatccggaactcgcccctccattactcggcggcgaagggccac 871 ||||||||||||| ||||| |||||||| || || ||||||||| Sbjct: 9626046 ggatccggaactcaccccttcattactcagcagcaaagggccac 9626003 Score = 117 bits (59), Expect = 9e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 935 cagactgctctgatgcaagcttgtctatatggtcattggaaagttgtacagattctagtt 994 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9625358 cagactgctctaatgcaagcttgtctatatggtcattggaaagttgtacagatcctagtt 9625299 Query: 995 cttcttaaagc 1005 ||| ||||||| Sbjct: 9625298 ctttttaaagc 9625288