BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf057b13 (997 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 137 1e-28 emb|CT833746.1| Oryza sativa (indica cultivar-group) cDNA clone:... 88 8e-14 ref|NM_001054137.1| Oryza sativa (japonica cultivar-group) Os02g... 84 1e-12 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 155 bits (78), Expect = 4e-34 Identities = 188/226 (83%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 228 cgccaccggccccgaccacgccacctccggcaccgaccacgccgcccccgtcaccgccgg 287 |||| ||||| |||||||||||||| ||||| || ||||| ||||| ||||| || |||| Sbjct: 26355609 cgcctccggcaccgaccacgccacccccggcgcccaccaccccgccgccgtctcccccgg 26355668 Query: 288 cgcagcctccgcctgctcccaccacgccgcccccgtcgcccccggcgcagcctccgccag 347 || ||| ||||| |||||||||||||| ||||||||||| ||| |||||||||| || | Sbjct: 26355669 cgacgcccccgcccgctcccaccacgccacccccgtcgccgccgtcgcagcctcctccgg 26355728 Query: 348 ctcccgccaccccg---------cccccggccacgccgcctcccgcacccaccaccccgc 398 | |||||||||||| |||||||| ||||| || ||||| ||| ||||||||| Sbjct: 26355729 cccccgccaccccgccgccgtctcccccggcgacgcccccgcccgctcccgccaccccgc 26355788 Query: 399 ccccgtcgccgcccaacgcgccgcctcccgccacgcctcctccccc 444 ||||||| |||||| ||||| ||||||||||||||||||||||| Sbjct: 26355789 ccccgtccccgcccctggcgcctcctcccgccacgcctcctccccc 26355834 Score = 87.7 bits (44), Expect = 8e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 609 cgacgagcgcgcgcgcggccggcgtcgccgtgctcgtggcattggcgggcgc 660 |||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 26356014 cgacgaccgcgcgcgcggccggcgtcgccgcgctcgtggcattggcgggcgc 26356065 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/91 (89%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 895 tgtacgttaattactacttttt---ggttctatagagag--gatttgtgtatatttttcc 949 |||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 26356367 tgtacgttaattactacttttttttggttctatagagggaagatttgtgtatatttttg- 26356425 Query: 950 gtgtatcattttcggtggccattgaataaaa 980 ||||||||||||||||||| |||||||||| Sbjct: 26356426 gtgtatcattttcggtggcagttgaataaaa 26356456 >dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 155 bits (78), Expect = 4e-34 Identities = 188/226 (83%), Gaps = 9/226 (3%) Strand = Plus / Plus Query: 228 cgccaccggccccgaccacgccacctccggcaccgaccacgccgcccccgtcaccgccgg 287 |||| ||||| |||||||||||||| ||||| || ||||| ||||| ||||| || |||| Sbjct: 87961 cgcctccggcaccgaccacgccacccccggcgcccaccaccccgccgccgtctcccccgg 88020 Query: 288 cgcagcctccgcctgctcccaccacgccgcccccgtcgcccccggcgcagcctccgccag 347 || ||| ||||| |||||||||||||| ||||||||||| ||| |||||||||| || | Sbjct: 88021 cgacgcccccgcccgctcccaccacgccacccccgtcgccgccgtcgcagcctcctccgg 88080 Query: 348 ctcccgccaccccg---------cccccggccacgccgcctcccgcacccaccaccccgc 398 | |||||||||||| |||||||| ||||| || ||||| ||| ||||||||| Sbjct: 88081 cccccgccaccccgccgccgtctcccccggcgacgcccccgcccgctcccgccaccccgc 88140 Query: 399 ccccgtcgccgcccaacgcgccgcctcccgccacgcctcctccccc 444 ||||||| |||||| ||||| ||||||||||||||||||||||| Sbjct: 88141 ccccgtccccgcccctggcgcctcctcccgccacgcctcctccccc 88186 Score = 87.7 bits (44), Expect = 8e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 609 cgacgagcgcgcgcgcggccggcgtcgccgtgctcgtggcattggcgggcgc 660 |||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 88366 cgacgaccgcgcgcgcggccggcgtcgccgcgctcgtggcattggcgggcgc 88417 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/91 (89%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 895 tgtacgttaattactacttttt---ggttctatagagag--gatttgtgtatatttttcc 949 |||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 88719 tgtacgttaattactacttttttttggttctatagagggaagatttgtgtatatttttg- 88777 Query: 950 gtgtatcattttcggtggccattgaataaaa 980 ||||||||||||||||||| |||||||||| Sbjct: 88778 gtgtatcattttcggtggcagttgaataaaa 88808 >emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 137 bits (69), Expect = 1e-28 Identities = 225/276 (81%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 246 cgccacctccggcaccgaccacgccgcccccgtcaccgccgg-cgcagcctccgcctgct 304 ||||||| ||||| |||||||| ||||| ||||| || |||| || ||| ||||| ||| Sbjct: 78769 cgccacccccggcgccgaccaccccgccgccgtctcccccgggcgacgcccccgcccgct 78828 Query: 305 cccaccacgccgcccccgtcgcccccggcgcagcctccgccagctcccgccaccccg--- 361 ||||||||||| ||||||||||| ||| |||||||||| || || |||||||||||| Sbjct: 78829 cccaccacgccacccccgtcgccgccgtcgcagcctcctccggcccccgccaccccgccg 78888 Query: 362 ------cccccggccacgccgcctcccgcacccaccaccccgcccccgtcgccgcccaac 415 |||||||| ||||| || ||||| ||| |||||||||||||||| |||||| Sbjct: 78889 ccgtctcccccggcgacgcccccgcccgctcccgccaccccgcccccgtccccgcccctg 78948 Query: 416 gcgccgcctcccgccacgcctcctcccccagccaccccgccgccgccgtccgctgcgccc 475 ||||| ||||||||||||||||||||||| || || || |||||| || | | |||||| Sbjct: 78949 gcgcctcctcccgccacgcctcctcccccggcgacgcctccgccggcgcctg--gcgccc 79006 Query: 476 acgccttccccgagcaccgccccgacggtctccccc 511 |||| ||||| |||||||||||||||| ||||| Sbjct: 79007 gcgcccaccccgtccaccgccccgacggtcgccccc 79042 Score = 87.7 bits (44), Expect = 8e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 609 cgacgagcgcgcgcgcggccggcgtcgccgtgctcgtggcattggcgggcgc 660 |||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79158 cgacgaccgcgcgcgcggccggcgtcgccgcgctcgtggcattggcgggcgc 79209 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/91 (89%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 895 tgtacgttaattactacttttt---ggttctatagagag--gatttgtgtatatttttcc 949 |||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 79510 tgtacgttaattactacttttttttggttctatagagggaagatttgtgtatatttttg- 79568 Query: 950 gtgtatcattttcggtggccattgaataaaa 980 ||||||||||||||||||| |||||||||| Sbjct: 79569 gtgtatcattttcggtggcagttgaataaaa 79599 >emb|CT833746.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA013P19, full insert sequence Length = 803 Score = 87.7 bits (44), Expect = 8e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 609 cgacgagcgcgcgcgcggccggcgtcgccgtgctcgtggcattggcgggcgc 660 |||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 547 cgacgaccgcgcgcgcggccggcgtcgccgcgctcgtggcattggcgggcgc 598 Score = 85.7 bits (43), Expect = 3e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 362 cccccggccacgccgcctcccgcacccaccaccccgcccccgtcgccgcccaacgcgccg 421 |||||||| ||||| || ||||| ||| |||||||||||||||| |||||| ||||| Sbjct: 285 cccccggcgacgcccccgcccgctcccgccaccccgcccccgtccccgcccctggcgcct 344 Query: 422 cctcccgccacgcctcctccccc 444 ||||||||||||||||||||||| Sbjct: 345 cctcccgccacgcctcctccccc 367 >ref|NM_001054137.1| Oryza sativa (japonica cultivar-group) Os02g0653000 (Os02g0653000) mRNA, complete cds Length = 404 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/91 (89%), Gaps = 6/91 (6%) Strand = Plus / Plus Query: 895 tgtacgttaattactacttttt---ggttctatagagag--gatttgtgtatatttttcc 949 |||||||||||||||||||||| |||||||||||| | ||||||||||||||||| Sbjct: 299 tgtacgttaattactacttttttttggttctatagagggaagatttgtgtatatttttg- 357 Query: 950 gtgtatcattttcggtggccattgaataaaa 980 ||||||||||||||||||| |||||||||| Sbjct: 358 gtgtatcattttcggtggcagttgaataaaa 388