BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf056p09 (1246 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055269.1| Oryza sativa (japonica cultivar-group) Os03g... 686 0.0 gb|AF066050.1|AF066050 Oryza sativa thymidine kinase (TK) mRNA, ... 686 0.0 dbj|AK068779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 678 0.0 dbj|AK066124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 664 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 258 5e-65 >ref|NM_001055269.1| Oryza sativa (japonica cultivar-group) Os03g0113100 (Os03g0113100) mRNA, complete cds Length = 1279 Score = 686 bits (346), Expect = 0.0 Identities = 532/594 (89%) Strand = Plus / Plus Query: 509 ccggcgagattcacgtcatcttgggccccatgttcgccggcaagacaaccgctctcctcc 568 |||| ||||||||||||||| ||||||||||||||||||| ||||| || || || |||| Sbjct: 459 ccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctcc 518 Query: 569 gccgcgtccaggctgaagccggcaccggcaggactgtagcactcataaagtctgacaagg 628 | ||||| |||| || |||||||| ||||||| || |||||||| ||||||||||||| Sbjct: 519 gacgcgtgcaggtcgaggccggcactggcaggaacgtggcactcatcaagtctgacaagg 578 Query: 629 acaatcgatatggattggattctgttgtgacacatgatggcacaaagatggcatgctggg 688 ||||| | ||||||||||||||||| || || |||||||||||||||||| ||||||||| Sbjct: 579 acaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctggg 638 Query: 689 cgctaccagagctttcaagtttccgagataaattaggaacagaggcttatgataaggtag 748 | ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| | Sbjct: 639 ctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggttg 698 Query: 749 atgtcataggtattgatgaagcccagttctttgatgatcttcatgatttctgctgcaaag 808 |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 699 atgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaag 758 Query: 809 ctgctgaccatgatggaaaaattgttgtcgttgcagggctagatggtgattacaaaagga 868 ||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 759 ctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaagga 818 Query: 869 acaagtttggctcagttctggacattattccccttgccgactcggtcaccaagctaacag 928 |||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || | Sbjct: 819 acaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccg 878 Query: 929 cgcgctgtgagttgtgcggtcgccgggccttcttcacattgaggaagacgcaggaaacca 988 | ||||||||||||||||||||||| || |||||||| |||||||||| | |||||| | Sbjct: 879 cacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaacta 938 Query: 989 agactgaactcattggaggagctgatgtgtatatgcctgtatgtaggcagcactacatgg 1048 |||| || ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 939 agaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctgg 998 Query: 1049 acgggcagattgttattgaggccacaaggattgttctggaccttgaaagatcca 1102 | || |||||||| |||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 999 atggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatcca 1052 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 272 gctctacaaatcccgcccgcatgcgctccattggcgccatgagatccctcctcgc 326 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 225 gctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgc 279 >gb|AF066050.1|AF066050 Oryza sativa thymidine kinase (TK) mRNA, complete cds Length = 1037 Score = 686 bits (346), Expect = 0.0 Identities = 532/594 (89%) Strand = Plus / Plus Query: 509 ccggcgagattcacgtcatcttgggccccatgttcgccggcaagacaaccgctctcctcc 568 |||| ||||||||||||||| ||||||||||||||||||| ||||| || || || |||| Sbjct: 204 ccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctcc 263 Query: 569 gccgcgtccaggctgaagccggcaccggcaggactgtagcactcataaagtctgacaagg 628 | ||||| |||| || |||||||| ||||||| || |||||||| ||||||||||||| Sbjct: 264 gacgcgtgcaggtcgaggccggcactggcaggaacgtggcactcatcaagtctgacaagg 323 Query: 629 acaatcgatatggattggattctgttgtgacacatgatggcacaaagatggcatgctggg 688 ||||| | ||||||||||||||||| || || |||||||||||||||||| ||||||||| Sbjct: 324 acaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctggg 383 Query: 689 cgctaccagagctttcaagtttccgagataaattaggaacagaggcttatgataaggtag 748 | ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| | Sbjct: 384 ctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggttg 443 Query: 749 atgtcataggtattgatgaagcccagttctttgatgatcttcatgatttctgctgcaaag 808 |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 444 atgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaag 503 Query: 809 ctgctgaccatgatggaaaaattgttgtcgttgcagggctagatggtgattacaaaagga 868 ||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 504 ctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaagga 563 Query: 869 acaagtttggctcagttctggacattattccccttgccgactcggtcaccaagctaacag 928 |||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || | Sbjct: 564 acaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccg 623 Query: 929 cgcgctgtgagttgtgcggtcgccgggccttcttcacattgaggaagacgcaggaaacca 988 | ||||||||||||||||||||||| || |||||||| |||||||||| | |||||| | Sbjct: 624 cacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaacta 683 Query: 989 agactgaactcattggaggagctgatgtgtatatgcctgtatgtaggcagcactacatgg 1048 |||| || ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 684 agaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctgg 743 Query: 1049 acgggcagattgttattgaggccacaaggattgttctggaccttgaaagatcca 1102 | || |||||||| |||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 744 atggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatcca 797 >dbj|AK068779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158G10, full insert sequence Length = 1281 Score = 678 bits (342), Expect = 0.0 Identities = 531/594 (89%) Strand = Plus / Plus Query: 509 ccggcgagattcacgtcatcttgggccccatgttcgccggcaagacaaccgctctcctcc 568 |||| ||||||||||||||| ||||||||||||||||||| ||||| || || || |||| Sbjct: 461 ccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctcc 520 Query: 569 gccgcgtccaggctgaagccggcaccggcaggactgtagcactcataaagtctgacaagg 628 | ||||| |||| || |||||||| ||||||| || |||||||| ||||||||||||| Sbjct: 521 gacgcgtgcaggtcgaggccggcactggcaggaacgtggcactcatcaagtctgacaagg 580 Query: 629 acaatcgatatggattggattctgttgtgacacatgatggcacaaagatggcatgctggg 688 ||||| | ||||||||||||||||| || || |||||||||||||||||| ||||||||| Sbjct: 581 acaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctggg 640 Query: 689 cgctaccagagctttcaagtttccgagataaattaggaacagaggcttatgataaggtag 748 | ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| | Sbjct: 641 ctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggttg 700 Query: 749 atgtcataggtattgatgaagcccagttctttgatgatcttcatgatttctgctgcaaag 808 |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 701 atgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaag 760 Query: 809 ctgctgaccatgatggaaaaattgttgtcgttgcagggctagatggtgattacaaaagga 868 ||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 761 ctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaagga 820 Query: 869 acaagtttggctcagttctggacattattccccttgccgactcggtcaccaagctaacag 928 |||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| || | Sbjct: 821 acaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccg 880 Query: 929 cgcgctgtgagttgtgcggtcgccgggccttcttcacattgaggaagacgcaggaaacca 988 | ||||||||||||||||||||||| || |||||||| |||||||||| | |||||| | Sbjct: 881 cacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaacta 940 Query: 989 agactgaactcattggaggagctgatgtgtatatgcctgtatgtaggcagcactacatgg 1048 |||| || ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 941 agaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctgg 1000 Query: 1049 acgggcagattgttattgaggccacaaggattgttctggaccttgaaagatcca 1102 | || || ||||| |||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 1001 atggtcaaattgtcattgaggccacaaggattgtgctggatcttgaaaaatcca 1054 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 272 gctctacaaatcccgcccgcatgcgctccattggcgccatgagatccctcctcgc 326 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 227 gctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgc 281 >dbj|AK066124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057I21, full insert sequence Length = 1284 Score = 664 bits (335), Expect = 0.0 Identities = 532/597 (89%), Gaps = 3/597 (0%) Strand = Plus / Plus Query: 509 ccggcgagattcacgtcatcttgggccccatgttcgccggcaagacaaccgctctcctcc 568 |||| ||||||||||||||| ||||||||||||||||||| ||||| || || || |||| Sbjct: 473 ccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctcc 532 Query: 569 gccgcgtccaggctgaagccggcaccggcag---gactgtagcactcataaagtctgaca 625 | ||||| |||| || |||||||| ||||| || || |||||||| |||||||||| Sbjct: 533 gacgcgtgcaggtcgaggccggcactggcagcaggaacgtggcactcatcaagtctgaca 592 Query: 626 aggacaatcgatatggattggattctgttgtgacacatgatggcacaaagatggcatgct 685 |||||||| | ||||||||||||||||| || || |||||||||||||||||| |||||| Sbjct: 593 aggacaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgct 652 Query: 686 gggcgctaccagagctttcaagtttccgagataaattaggaacagaggcttatgataagg 745 |||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 653 gggctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataagg 712 Query: 746 tagatgtcataggtattgatgaagcccagttctttgatgatcttcatgatttctgctgca 805 | ||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 713 ttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgca 772 Query: 806 aagctgctgaccatgatggaaaaattgttgtcgttgcagggctagatggtgattacaaaa 865 |||||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 773 aagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaa 832 Query: 866 ggaacaagtttggctcagttctggacattattccccttgccgactcggtcaccaagctaa 925 ||||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| | Sbjct: 833 ggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctca 892 Query: 926 cagcgcgctgtgagttgtgcggtcgccgggccttcttcacattgaggaagacgcaggaaa 985 | || ||||||||||||||||||||||| || |||||||| |||||||||| | ||||| Sbjct: 893 ccgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaa 952 Query: 986 ccaagactgaactcattggaggagctgatgtgtatatgcctgtatgtaggcagcactaca 1045 | ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 953 ctaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacc 1012 Query: 1046 tggacgggcagattgttattgaggccacaaggattgttctggaccttgaaagatcca 1102 |||| || |||||||| |||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 1013 tggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatcca 1069 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 272 gctctacaaatcccgcccgcatgcgctccattggcgccatgagatccctcctcgc 326 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 239 gctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgc 293 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 258 bits (130), Expect = 5e-65 Identities = 211/238 (88%) Strand = Plus / Plus Query: 865 aggaacaagtttggctcagttctggacattattccccttgccgactcggtcaccaagcta 924 |||||||| ||||| ||||||||||||||||| ||| | || ||||||||||||||||| Sbjct: 717658 aggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctc 717717 Query: 925 acagcgcgctgtgagttgtgcggtcgccgggccttcttcacattgaggaagacgcaggaa 984 || || ||||||||||||||||||||||| || |||||||| |||||||||| | |||| Sbjct: 717718 accgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaa 717777 Query: 985 accaagactgaactcattggaggagctgatgtgtatatgcctgtatgtaggcagcactac 1044 || ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 717778 actaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactac 717837 Query: 1045 atggacgggcagattgttattgaggccacaaggattgttctggaccttgaaagatcca 1102 |||| || |||||||| |||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 717838 ctggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatcca 717895 Score = 192 bits (97), Expect = 2e-45 Identities = 130/141 (92%) Strand = Plus / Plus Query: 607 gcactcataaagtctgacaaggacaatcgatatggattggattctgttgtgacacatgat 666 |||||||| |||||||||||||||||| | ||||||||||||||||| || || |||||| Sbjct: 715948 gcactcatcaagtctgacaaggacaataggtatggattggattctgtcgtaactcatgat 716007 Query: 667 ggcacaaagatggcatgctgggcgctaccagagctttcaagtttccgagataaattagga 726 |||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 716008 ggcacaaagatgccatgctgggctctacctgagctttcaagtttccaagataaattagga 716067 Query: 727 acagaggcttatgataaggta 747 ||||||||||| ||||||||| Sbjct: 716068 acagaggcttacgataaggta 716088 Score = 184 bits (93), Expect = 6e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 743 aggtagatgtcataggtattgatgaagcccagttctttgatgatcttcatgatttctgct 802 |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 717169 aggttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgct 717228 Query: 803 gcaaagctgctgaccatgatggaaaaattgttgtcgttgcagggctagatggtgattaca 862 ||||||||||||||| |||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 717229 gcaaagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactaca 717288 Query: 863 aaagg 867 ||||| Sbjct: 717289 aaagg 717293 Score = 79.8 bits (40), Expect = 2e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 509 ccggcgagattcacgtcatcttgggccccatgttcgccggcaagacaaccgctctcctcc 568 |||| ||||||||||||||| ||||||||||||||||||| ||||| || || || |||| Sbjct: 714999 ccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctcc 715058 Query: 569 gccgcgtccaggctgaagccggcaccggcagg 600 | ||||| |||| || |||||||| |||||| Sbjct: 715059 gacgcgtgcaggtcgaggccggcactggcagg 715090 Score = 77.8 bits (39), Expect = 1e-10 Identities = 51/55 (92%) Strand = Plus / Plus Query: 272 gctctacaaatcccgcccgcatgcgctccattggcgccatgagatccctcctcgc 326 ||||||||||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct: 714765 gctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgc 714819