BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055n22 (1317 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058260.1| Oryza sativa (japonica cultivar-group) Os03g... 337 7e-89 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 337 7e-89 gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 337 7e-89 emb|AM084349.1| Hordeum vulgare subsp. vulgare dof1 gene for dof... 285 2e-73 ref|NM_001065782.1| Oryza sativa (japonica cultivar-group) Os07g... 280 1e-71 >ref|NM_001058260.1| Oryza sativa (japonica cultivar-group) Os03g0821200 (Os03g0821200) mRNA, complete cds Length = 1245 Score = 337 bits (170), Expect = 7e-89 Identities = 230/250 (92%) Strand = Plus / Plus Query: 263 ccggcggctcgtcggtgcggccaggatcgatggaggagcgcgctcggatggccaagatgc 322 |||||||| || |||||||||| || |||||| ||| || |||||| |||| ||||| | Sbjct: 275 ccggcggcacggcggtgcggccgggctcgatgacggaacgggctcggctggcgaagatcc 334 Query: 323 cgcagctggagccgaggctcaagtgcccgcgatgcgactccaccaacaccaagttctgct 382 |||||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 335 cgcagccggagccggggctcaagtgcccgcgctgcgagtccaccaacaccaagttctgct 394 Query: 383 acttcaacaactactccctctcgcagccgcgccacttctgcaagacgtgccgccgatact 442 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 395 acttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgctact 454 Query: 443 ggacgcgcggcggcgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 502 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 514 Query: 503 gcaacaagtc 512 ||| |||||| Sbjct: 515 gcaccaagtc 524 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 337 bits (170), Expect = 7e-89 Identities = 230/250 (92%) Strand = Plus / Plus Query: 263 ccggcggctcgtcggtgcggccaggatcgatggaggagcgcgctcggatggccaagatgc 322 |||||||| || |||||||||| || |||||| ||| || |||||| |||| ||||| | Sbjct: 34242218 ccggcggcacggcggtgcggccgggctcgatgacggaacgggctcggctggcgaagatcc 34242277 Query: 323 cgcagctggagccgaggctcaagtgcccgcgatgcgactccaccaacaccaagttctgct 382 |||||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 34242278 cgcagccggagccggggctcaagtgcccgcgctgcgagtccaccaacaccaagttctgct 34242337 Query: 383 acttcaacaactactccctctcgcagccgcgccacttctgcaagacgtgccgccgatact 442 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 34242338 acttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgctact 34242397 Query: 443 ggacgcgcggcggcgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 502 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34242398 ggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 34242457 Query: 503 gcaacaagtc 512 ||| |||||| Sbjct: 34242458 gcaccaagtc 34242467 Score = 270 bits (136), Expect = 1e-68 Identities = 172/184 (93%) Strand = Plus / Minus Query: 321 gccgcagctggagccgaggctcaagtgcccgcgatgcgactccaccaacaccaagttctg 380 |||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9330532 gccgcagccggagccggcgctcaagtgcccgcgctgcgactccaccaacaccaagttctg 9330473 Query: 381 ctacttcaacaactactccctctcgcagccgcgccacttctgcaagacgtgccgccgata 440 ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 9330472 ctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccgcta 9330413 Query: 441 ctggacgcgcggcggcgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaa 500 |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9330412 ctggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccggaacaa 9330353 Query: 501 gcgc 504 |||| Sbjct: 9330352 gcgc 9330349 Score = 159 bits (80), Expect = 3e-35 Identities = 131/148 (88%) Strand = Plus / Minus Query: 345 gtgcccgcgatgcgactccaccaacaccaagttctgctacttcaacaactactccctctc 404 ||||||||| ||| |||| | ||||||||||||||||||| |||||||||| |||| | Sbjct: 31450159 gtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacctcac 31450100 Query: 405 gcagccgcgccacttctgcaagacgtgccgccgatactggacgcgcggcggcgcactccg 464 |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 31450099 ccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgctccg 31450040 Query: 465 caacgtccccgtcggcggcgggtgccgc 492 |||||||||| ||||||||||||||||| Sbjct: 31450039 caacgtccccatcggcggcgggtgccgc 31450012 Score = 135 bits (68), Expect = 5e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 345 gtgcccgcgatgcgactccaccaacaccaagttctgctacttcaacaactactccctctc 404 ||||||||| |||||||| | ||||||||||||||||||| |||||||||| |||| Sbjct: 21400726 gtgcccgcggtgcgactcgccgaacaccaagttctgctactacaacaactacagcctcag 21400785 Query: 405 gcagccgcgccacttctgcaagacgtgccgccgatactggacgcgcggcggcgcactccg 464 ||||||||||||||||||||||||||||| | |||||||| |||||||| ||||| Sbjct: 21400786 ccagccgcgccacttctgcaagacgtgccggaggtactggaccaagggcggcgcgctccg 21400845 Query: 465 caacgtccccgtcggcggcgggtgccgc 492 ||||||||| ||||||||||| |||||| Sbjct: 21400846 caacgtcccagtcggcggcggctgccgc 21400873 Score = 103 bits (52), Expect = 2e-18 Identities = 100/116 (86%) Strand = Plus / Minus Query: 368 acaccaagttctgctacttcaacaactactccctctcgcagccgcgccacttctgcaaga 427 |||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 23276174 acaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccgcg 23276115 Query: 428 cgtgccgccgatactggacgcgcggcggcgcactccgcaacgtccccgtcggcggc 483 | |||||||| |||||||||| ||||||| | ||||||||||||||| |||||||| Sbjct: 23276114 cctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcggcggc 23276059 >gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 337 bits (170), Expect = 7e-89 Identities = 230/250 (92%) Strand = Plus / Plus Query: 263 ccggcggctcgtcggtgcggccaggatcgatggaggagcgcgctcggatggccaagatgc 322 |||||||| || |||||||||| || |||||| ||| || |||||| |||| ||||| | Sbjct: 115558 ccggcggcacggcggtgcggccgggctcgatgacggaacgggctcggctggcgaagatcc 115617 Query: 323 cgcagctggagccgaggctcaagtgcccgcgatgcgactccaccaacaccaagttctgct 382 |||||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 115618 cgcagccggagccggggctcaagtgcccgcgctgcgagtccaccaacaccaagttctgct 115677 Query: 383 acttcaacaactactccctctcgcagccgcgccacttctgcaagacgtgccgccgatact 442 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115678 acttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgctact 115737 Query: 443 ggacgcgcggcggcgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 502 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115738 ggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgcaacaagc 115797 Query: 503 gcaacaagtc 512 ||| |||||| Sbjct: 115798 gcaccaagtc 115807 >emb|AM084349.1| Hordeum vulgare subsp. vulgare dof1 gene for dof zinc finger protein 1, exons 1-2 Length = 2447 Score = 285 bits (144), Expect = 2e-73 Identities = 216/240 (90%) Strand = Plus / Plus Query: 276 ggtgcggccaggatcgatggaggagcgcgctcggatggccaagatgccgcagctggagcc 335 |||||||||||| |||||| ||| || || |||||||||||||| ||||||| |||||| Sbjct: 988 ggtgcggccagggtcgatgacggaccgagcgcggatggccaagatcccgcagccggagcc 1047 Query: 336 gaggctcaagtgcccgcgatgcgactccaccaacaccaagttctgctacttcaacaacta 395 | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1048 ggggctcaagtgcccgcgctgcgagtccaccaacaccaagttctgctacttcaacaacta 1107 Query: 396 ctccctctcgcagccgcgccacttctgcaagacgtgccgccgatactggacgcgcggcgg 455 ||||||| ||||||| ||||||||||| ||| |||||||| |||||||| |||||||| Sbjct: 1108 ctccctcacgcagcccttccacttctgcaggacctgccgccgctactggacccgcggcgg 1167 Query: 456 cgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaagcgcaacaagtcctc 515 | | |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| Sbjct: 1168 cacgctccgcaacgtccccgtcggtggcggctgccgccgcaacaagcgcaccaagtcctc 1227 >ref|NM_001065782.1| Oryza sativa (japonica cultivar-group) Os07g0236700 (Os07g0236700) mRNA, complete cds Length = 1532 Score = 280 bits (141), Expect = 1e-71 Identities = 216/241 (89%) Strand = Plus / Plus Query: 264 cggcggctcgtcggtgcggccaggatcgatggaggagcgcgctcggatggccaagatgcc 323 ||||| ||| |||| |||||| | ||||||| ||||||||| ||||||| ||||| || Sbjct: 152 cggcgcctcctcggcgcggccggtgtcgatggcggagcgcgccaggatggcgaagatccc 211 Query: 324 gcagctggagccgaggctcaagtgcccgcgatgcgactccaccaacaccaagttctgcta 383 ||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 212 gcagccggagccggggctcaagtgtccgcgctgcgactccaccaacaccaagttctgcta 271 Query: 384 cttcaacaactactccctctcgcagccgcgccacttctgcaagacgtgccgccgatactg 443 ||||||||||||||||||| | ||||| ||||||||||||||| | |||||||| ||||| Sbjct: 272 cttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccgctactg 331 Query: 444 gacgcgcggcggcgcactccgcaacgtccccgtcggcggcgggtgccgccgcaacaagcg 503 ||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 332 gacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgcaacaagcg 391 Query: 504 c 504 | Sbjct: 392 c 392 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 958 gccggctcaggcgggcttatcacgcagatggcctcggtgaagatggacgaca 1009 |||||||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 804 gccggctccgccgggctcatcacgcagatggcctcggtgaagatggacgaca 855