BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055n20 (1778 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048316.1| Oryza sativa (japonica cultivar-group) Os01g... 333 1e-87 dbj|AK105067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 1e-87 dbj|AK066969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 1e-87 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 1e-53 dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 220 1e-53 >ref|NM_001048316.1| Oryza sativa (japonica cultivar-group) Os01g0107000 (Os01g0107000) mRNA, partial cds Length = 1764 Score = 333 bits (168), Expect = 1e-87 Identities = 285/324 (87%) Strand = Plus / Plus Query: 138 ccgatggccgcgcaatctcccagttcctcgccgcaagatggttctagcggaagcgggtcc 197 ||||||||||| |||||| ||| | |||||||||||||||||||| | || | | | | Sbjct: 98 ccgatggccgcccaatcttccactccctcgccgcaagatggttctggtagaggtgaattc 157 Query: 198 tcaggcaatctgttacttcaagctccacagccaatacgtgtggattacatacagaatgct 257 |||| |||| || |||||||| | ||||||||||| || | ||||||||||||||||||| Sbjct: 158 tcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgct 217 Query: 258 gttaagtttcttacacatccaaaagtgaagggttctccagtattttacaggcgctctttc 317 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctctttt 277 Query: 318 ctggaaaagaaaggcctcacgaaggaagaaatcgatgaggcctttcgacgggttcctgac 377 ||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||| Sbjct: 278 ctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctgat 337 Query: 378 ccacagccaaacagtacagatgctgcagctgttggttcacaactagcaagcaacccaaat 437 |||||||||||||||||||||| ||||||||||| |||||||| ||| ||| | ||||| Sbjct: 338 ccacagccaaacagtacagatgttgcagctgttgcttcacaacaagccggcatcgcaaat 397 Query: 438 caatctgctggggtgcaaccttac 461 ||||||||||| || ||||||||| Sbjct: 398 caatctgctggagtacaaccttac 421 Score = 133 bits (67), Expect = 3e-27 Identities = 103/115 (89%) Strand = Plus / Plus Query: 681 aatgaacttagatccaagctttatgaagaaattatagaagctataaaagcttctacatca 740 |||||||||| ||||||| ||||||||||||| | || ||| ||| ||| |||| ||||| Sbjct: 629 aatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatca 688 Query: 741 gccttttctgctattgctaaaacaaaccaagaattgcttgcttcaaaggatgaag 795 || ||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 689 gcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaag 743 Score = 129 bits (65), Expect = 4e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 538 ttagctggttccatacgctccttggtgtaggtgtttttcttggatttggggctagtgctg 597 ||||||||| || ||| ||| |||||||||||||||| || ||| ||||||||||||||| Sbjct: 486 ttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctg 545 Query: 598 ctgtcatcctcaagaaattgttctttcctaggctcaaatcttgga 642 |||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 546 ctgtcatcctcaagaaattgtttgttcctaggctaaaatcttgga 590 Score = 129 bits (65), Expect = 4e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 794 agataagaagatacttataaagttgacgcaagcatttgattcgcaagcagaggtttttaa 853 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||| Sbjct: 849 agataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttag 908 Query: 854 atccttgagcgagtccttaaatcatttaagggagaatcggttttcgcaatacaatcgatt 913 ||||||||| || ||||| |||| | | || |||||| |||||| || ||||||| | | Sbjct: 909 atccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaat 968 Query: 914 cgaagagcatgttcaacctgcaccatggaatgggccgagtaacaattcgtggagagcttc 973 || || ||| ||||| |||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 969 ggaggatcattttcaatctgccccatggaatgggccaactacaaattcatggagagcttc 1028 Query: 974 ccagcaaac 982 |||||||| Sbjct: 1029 tcagcaaac 1037 Score = 101 bits (51), Expect = 1e-17 Identities = 75/83 (90%) Strand = Plus / Plus Query: 1377 gaaagcccattccagcgtcgctgggttcccccgcaaccaccgggtgccatcatgccagag 1436 |||||||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||| Sbjct: 1336 gaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggag 1395 Query: 1437 gctgtggccgccatacggcagcc 1459 || |||||||||||||||||||| Sbjct: 1396 gccgtggccgccatacggcagcc 1418 >dbj|AK105067.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H02, full insert sequence Length = 1763 Score = 333 bits (168), Expect = 1e-87 Identities = 285/324 (87%) Strand = Plus / Plus Query: 138 ccgatggccgcgcaatctcccagttcctcgccgcaagatggttctagcggaagcgggtcc 197 ||||||||||| |||||| ||| | |||||||||||||||||||| | || | | | | Sbjct: 98 ccgatggccgcccaatcttccactccctcgccgcaagatggttctggtagaggtgaattc 157 Query: 198 tcaggcaatctgttacttcaagctccacagccaatacgtgtggattacatacagaatgct 257 |||| |||| || |||||||| | ||||||||||| || | ||||||||||||||||||| Sbjct: 158 tcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgct 217 Query: 258 gttaagtttcttacacatccaaaagtgaagggttctccagtattttacaggcgctctttc 317 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctctttt 277 Query: 318 ctggaaaagaaaggcctcacgaaggaagaaatcgatgaggcctttcgacgggttcctgac 377 ||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||| Sbjct: 278 ctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctgat 337 Query: 378 ccacagccaaacagtacagatgctgcagctgttggttcacaactagcaagcaacccaaat 437 |||||||||||||||||||||| ||||||||||| |||||||| ||| ||| | ||||| Sbjct: 338 ccacagccaaacagtacagatgttgcagctgttgcttcacaacaagccggcatcgcaaat 397 Query: 438 caatctgctggggtgcaaccttac 461 ||||||||||| || ||||||||| Sbjct: 398 caatctgctggagtacaaccttac 421 Score = 129 bits (65), Expect = 4e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 538 ttagctggttccatacgctccttggtgtaggtgtttttcttggatttggggctagtgctg 597 ||||||||| || ||| ||| |||||||||||||||| || ||| ||||||||||||||| Sbjct: 486 ttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctg 545 Query: 598 ctgtcatcctcaagaaattgttctttcctaggctcaaatcttgga 642 |||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 546 ctgtcatcctcaagaaattgtttgttcctaggctaaaatcttgga 590 Score = 129 bits (65), Expect = 4e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 794 agataagaagatacttataaagttgacgcaagcatttgattcgcaagcagaggtttttaa 853 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||| Sbjct: 848 agataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttag 907 Query: 854 atccttgagcgagtccttaaatcatttaagggagaatcggttttcgcaatacaatcgatt 913 ||||||||| || ||||| |||| | | || |||||| |||||| || ||||||| | | Sbjct: 908 atccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaat 967 Query: 914 cgaagagcatgttcaacctgcaccatggaatgggccgagtaacaattcgtggagagcttc 973 || || ||| ||||| |||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 968 ggaggatcattttcaatctgccccatggaatgggccaactacaaattcatggagagcttc 1027 Query: 974 ccagcaaac 982 |||||||| Sbjct: 1028 tcagcaaac 1036 Score = 125 bits (63), Expect = 7e-25 Identities = 103/115 (89%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 681 aatgaacttagatccaagctttatgaagaaattatagaagctataaaagcttctacatca 740 |||||||||| ||||||| ||||||||||||| | || ||| ||| ||| |||| ||||| Sbjct: 629 aatgaacttaaatccaag-tttatgaagaaatcaaagcagccatacaagattctgcatca 687 Query: 741 gccttttctgctattgctaaaacaaaccaagaattgcttgcttcaaaggatgaag 795 || ||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 688 gcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaag 742 Score = 101 bits (51), Expect = 1e-17 Identities = 75/83 (90%) Strand = Plus / Plus Query: 1377 gaaagcccattccagcgtcgctgggttcccccgcaaccaccgggtgccatcatgccagag 1436 |||||||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||| Sbjct: 1335 gaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggag 1394 Query: 1437 gctgtggccgccatacggcagcc 1459 || |||||||||||||||||||| Sbjct: 1395 gccgtggccgccatacggcagcc 1417 >dbj|AK066969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I21, full insert sequence Length = 1547 Score = 333 bits (168), Expect = 1e-87 Identities = 285/324 (87%) Strand = Plus / Plus Query: 138 ccgatggccgcgcaatctcccagttcctcgccgcaagatggttctagcggaagcgggtcc 197 ||||||||||| |||||| ||| | |||||||||||||||||||| | || | | | | Sbjct: 73 ccgatggccgcccaatcttccactccctcgccgcaagatggttctggtagaggtgaattc 132 Query: 198 tcaggcaatctgttacttcaagctccacagccaatacgtgtggattacatacagaatgct 257 |||| |||| || |||||||| | ||||||||||| || | ||||||||||||||||||| Sbjct: 133 tcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgct 192 Query: 258 gttaagtttcttacacatccaaaagtgaagggttctccagtattttacaggcgctctttc 317 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctctttt 252 Query: 318 ctggaaaagaaaggcctcacgaaggaagaaatcgatgaggcctttcgacgggttcctgac 377 ||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||| Sbjct: 253 ctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctgat 312 Query: 378 ccacagccaaacagtacagatgctgcagctgttggttcacaactagcaagcaacccaaat 437 |||||||||||||||||||||| ||||||||||| |||||||| ||| ||| | ||||| Sbjct: 313 ccacagccaaacagtacagatgttgcagctgttgcttcacaacaagccggcatcgcaaat 372 Query: 438 caatctgctggggtgcaaccttac 461 ||||||||||| || ||||||||| Sbjct: 373 caatctgctggagtacaaccttac 396 Score = 258 bits (130), Expect = 7e-65 Identities = 259/302 (85%) Strand = Plus / Plus Query: 681 aatgaacttagatccaagctttatgaagaaattatagaagctataaaagcttctacatca 740 |||||||||| ||||||| ||||||||||||| | || ||| ||| ||| |||| ||||| Sbjct: 604 aatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatca 663 Query: 741 gccttttctgctattgctaaaacaaaccaagaattgcttgcttcaaaggatgaagataag 800 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 664 gcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaagataag 723 Query: 801 aagatacttataaagttgacgcaagcatttgattcgcaagcagaggtttttaaatccttg 860 |||||||||| ||||||| | ||||||||||||||||||||||||| |||| ||||||| Sbjct: 724 aagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttagatccttg 783 Query: 861 agcgagtccttaaatcatttaagggagaatcggttttcgcaatacaatcgattcgaagag 920 || || ||||| |||| | | || |||||| |||||| || ||||||| | | || || Sbjct: 784 agtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaatggaggat 843 Query: 921 catgttcaacctgcaccatggaatgggccgagtaacaattcgtggagagcttcccagcaa 980 ||| ||||| |||| |||||||||||||| | || ||||| ||||||||||| |||||| Sbjct: 844 cattttcaatctgccccatggaatgggccaactacaaattcatggagagcttctcagcaa 903 Query: 981 ac 982 || Sbjct: 904 ac 905 Score = 129 bits (65), Expect = 4e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 538 ttagctggttccatacgctccttggtgtaggtgtttttcttggatttggggctagtgctg 597 ||||||||| || ||| ||| |||||||||||||||| || ||| ||||||||||||||| Sbjct: 461 ttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctg 520 Query: 598 ctgtcatcctcaagaaattgttctttcctaggctcaaatcttgga 642 |||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 521 ctgtcatcctcaagaaattgtttgttcctaggctaaaatcttgga 565 Score = 101 bits (51), Expect = 1e-17 Identities = 75/83 (90%) Strand = Plus / Plus Query: 1377 gaaagcccattccagcgtcgctgggttcccccgcaaccaccgggtgccatcatgccagag 1436 |||||||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||| Sbjct: 1204 gaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggag 1263 Query: 1437 gctgtggccgccatacggcagcc 1459 || |||||||||||||||||||| Sbjct: 1264 gccgtggccgccatacggcagcc 1286 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 220 bits (111), Expect = 1e-53 Identities = 162/179 (90%) Strand = Plus / Minus Query: 197 ctcaggcaatctgttacttcaagctccacagccaatacgtgtggattacatacagaatgc 256 ||||| |||| || |||||||| | ||||||||||| || | |||||||||||||||||| Sbjct: 384901 ctcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgc 384842 Query: 257 tgttaagtttcttacacatccaaaagtgaagggttctccagtattttacaggcgctcttt 316 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384841 tgttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctcttt 384782 Query: 317 cctggaaaagaaaggcctcacgaaggaagaaatcgatgaggcctttcgacgggttcctg 375 ||||||||||||||||| || |||||||||||||| |||||||| || |||||||||| Sbjct: 384781 tctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctg 384723 Score = 133 bits (67), Expect = 3e-27 Identities = 103/115 (89%) Strand = Plus / Minus Query: 681 aatgaacttagatccaagctttatgaagaaattatagaagctataaaagcttctacatca 740 |||||||||| ||||||| ||||||||||||| | || ||| ||| ||| |||| ||||| Sbjct: 383780 aatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatca 383721 Query: 741 gccttttctgctattgctaaaacaaaccaagaattgcttgcttcaaaggatgaag 795 || ||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 383720 gcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaag 383666 Score = 105 bits (53), Expect = 6e-19 Identities = 128/153 (83%) Strand = Plus / Minus Query: 794 agataagaagatacttataaagttgacgcaagcatttgattcgcaagcagaggtttttaa 853 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||| Sbjct: 383560 agataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttag 383501 Query: 854 atccttgagcgagtccttaaatcatttaagggagaatcggttttcgcaatacaatcgatt 913 ||||||||| || ||||| |||| | | || |||||| |||||| || ||||||| | | Sbjct: 383500 atccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaat 383441 Query: 914 cgaagagcatgttcaacctgcaccatggaatgg 946 || || ||| ||||| |||| ||||||||||| Sbjct: 383440 ggaggatcattttcaatctgccccatggaatgg 383408 Score = 101 bits (51), Expect = 1e-17 Identities = 75/83 (90%) Strand = Plus / Minus Query: 1377 gaaagcccattccagcgtcgctgggttcccccgcaaccaccgggtgccatcatgccagag 1436 |||||||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||| Sbjct: 382678 gaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggag 382619 Query: 1437 gctgtggccgccatacggcagcc 1459 || |||||||||||||||||||| Sbjct: 382618 gccgtggccgccatacggcagcc 382596 Score = 91.7 bits (46), Expect = 9e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 538 ttagctggttccatacgctccttggtgtaggtgtttttcttggatttggggctagtgctg 597 ||||||||| || ||| ||| |||||||||||||||| || ||| ||||||||||||||| Sbjct: 384007 ttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctg 383948 Query: 598 ctgtcatcctcaag 611 |||||||||||||| Sbjct: 383947 ctgtcatcctcaag 383934 >dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 220 bits (111), Expect = 1e-53 Identities = 162/179 (90%) Strand = Plus / Minus Query: 197 ctcaggcaatctgttacttcaagctccacagccaatacgtgtggattacatacagaatgc 256 ||||| |||| || |||||||| | ||||||||||| || | |||||||||||||||||| Sbjct: 136739 ctcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgc 136680 Query: 257 tgttaagtttcttacacatccaaaagtgaagggttctccagtattttacaggcgctcttt 316 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136679 tgttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctcttt 136620 Query: 317 cctggaaaagaaaggcctcacgaaggaagaaatcgatgaggcctttcgacgggttcctg 375 ||||||||||||||||| || |||||||||||||| |||||||| || |||||||||| Sbjct: 136619 tctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctg 136561 Score = 133 bits (67), Expect = 3e-27 Identities = 103/115 (89%) Strand = Plus / Minus Query: 681 aatgaacttagatccaagctttatgaagaaattatagaagctataaaagcttctacatca 740 |||||||||| ||||||| ||||||||||||| | || ||| ||| ||| |||| ||||| Sbjct: 135618 aatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatca 135559 Query: 741 gccttttctgctattgctaaaacaaaccaagaattgcttgcttcaaaggatgaag 795 || ||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135558 gcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaag 135504 Score = 105 bits (53), Expect = 6e-19 Identities = 128/153 (83%) Strand = Plus / Minus Query: 794 agataagaagatacttataaagttgacgcaagcatttgattcgcaagcagaggtttttaa 853 ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||| Sbjct: 135398 agataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttag 135339 Query: 854 atccttgagcgagtccttaaatcatttaagggagaatcggttttcgcaatacaatcgatt 913 ||||||||| || ||||| |||| | | || |||||| |||||| || ||||||| | | Sbjct: 135338 atccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaat 135279 Query: 914 cgaagagcatgttcaacctgcaccatggaatgg 946 || || ||| ||||| |||| ||||||||||| Sbjct: 135278 ggaggatcattttcaatctgccccatggaatgg 135246 Score = 101 bits (51), Expect = 1e-17 Identities = 75/83 (90%) Strand = Plus / Minus Query: 1377 gaaagcccattccagcgtcgctgggttcccccgcaaccaccgggtgccatcatgccagag 1436 |||||||| ||||||||||||||||||||||| || |||||||| | | ||||||| ||| Sbjct: 134516 gaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggag 134457 Query: 1437 gctgtggccgccatacggcagcc 1459 || |||||||||||||||||||| Sbjct: 134456 gccgtggccgccatacggcagcc 134434 Score = 91.7 bits (46), Expect = 9e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 538 ttagctggttccatacgctccttggtgtaggtgtttttcttggatttggggctagtgctg 597 ||||||||| || ||| ||| |||||||||||||||| || ||| ||||||||||||||| Sbjct: 135845 ttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctg 135786 Query: 598 ctgtcatcctcaag 611 |||||||||||||| Sbjct: 135785 ctgtcatcctcaag 135772