BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055e13 (1021 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241798.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 280 1e-71 ref|NM_001069921.1| Oryza sativa (japonica cultivar-group) Os09g... 272 3e-69 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 >dbj|AK241798.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065208G04, full insert sequence Length = 1166 Score = 280 bits (141), Expect = 1e-71 Identities = 285/331 (86%), Gaps = 9/331 (2%) Strand = Plus / Plus Query: 76 aacaatgccttgcttggcacaggactaccgccccaagctccccgccaccaaacact---g 132 ||||||||||||| |||||||||| || | |||||||| || |||||||| |||| | Sbjct: 147 aacaatgccttgcctggcacaggagtatcatcccaagctaccagccaccaatcactactg 206 Query: 133 caagtccctctcctccctcatcaaggagacctacgcgcactgccatgtcccctgcgtcag 192 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| Sbjct: 207 caagtccctctcctccctcatcagggagacctacgcccactgccatgtcccctgcgccag 266 Query: 193 gatccccgccgccgggtggagctccggcgaggacagcgacgacgacagcagc---ctcaa 249 ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| | Sbjct: 267 gatccccgccgccggctggagctccggcgacgacagcgacgacgatgacagcttgctcga 326 Query: 250 cgatgtgctcgacacgaagcaggtcatactcaacgagatgaggaaccggcagatgaagaa 309 ||| ||||||||||| |||||||| || | ||||||||||||||||||||||||||||| Sbjct: 327 cgaagtgctcgacaccaagcaggtgatcatgaacgagatgaggaaccggcagatgaagaa 386 Query: 310 gcggtcgaggtgcagcgttgactcgccgactctgtcgagcactttcgtctggtctttcac 369 | || ||||||||||| | || || |||| |||||||| | ||||||||||| ||||| Sbjct: 387 gagggcgaggtgcagcctggattccccga---tgtcgagcccgttcgtctggtcgttcac 443 Query: 370 tccactcgatccgagaagcgttcttgagaag 400 || ||||| ||||| |||||||| |||||| Sbjct: 444 gccgctcgacccgaggagcgttctggagaag 474 Score = 135 bits (68), Expect = 4e-28 Identities = 133/155 (85%), Gaps = 6/155 (3%) Strand = Plus / Plus Query: 570 tggacccgccgcctccgatgcggtcgccggcgatgtgggagggcttcccggactgcgagg 629 |||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 644 tggacccgccgcctcccctgctgtcgccggcgaagtgggaggggctccgtgactgcgagg 703 Query: 630 ggtggccgttcgggctgtgc------catagccccaccgtcctgccgctgccaccgctgc 683 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||| Sbjct: 704 ggtggccgttcgggctgtgccgcctccccggccccgccgtcctgccgctgccgccgctgc 763 Query: 684 ccagcacgccggctgactcgtggaaatggcgcaag 718 ||||||||||||| ||||||||| | ||||||||| Sbjct: 764 ccagcacgccggccgactcgtggcagtggcgcaag 798 Score = 131 bits (66), Expect = 6e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 477 gcgacgccgacgacgagagcgtggcgttcttctctgtgaggagcttcttctcgcgcagca 536 ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct: 542 gcgacgccgacgacgagagcgaggcgttcttctcggtgaagagcttcttctcgcgcagca 601 Query: 537 cgagccgggcggcgaccgtggcgtcgtcgg 566 ||||||| | ||||||||||||||||||| Sbjct: 602 cgagccgtggcgcgaccgtggcgtcgtcgg 631 >ref|NM_001069921.1| Oryza sativa (japonica cultivar-group) Os09g0460100 (Os09g0460100) mRNA, complete cds Length = 723 Score = 272 bits (137), Expect = 3e-69 Identities = 281/327 (85%), Gaps = 9/327 (2%) Strand = Plus / Plus Query: 80 atgccttgcttggcacaggactaccgccccaagctccccgccaccaaacact---gcaag 136 ||||||||| |||||||||| || | |||||||| || |||||||| |||| ||||| Sbjct: 1 atgccttgcctggcacaggagtatcatcccaagctaccagccaccaatcactactgcaag 60 Query: 137 tccctctcctccctcatcaaggagacctacgcgcactgccatgtcccctgcgtcaggatc 196 ||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||| Sbjct: 61 tccctctcctccctcatcagggagacctacgcccactgccatgtcccctgcgccaggatc 120 Query: 197 cccgccgccgggtggagctccggcgaggacagcgacgacgacagcagc---ctcaacgat 253 ||||||||||| |||||||||||||| |||||||||||||| |||| ||| |||| Sbjct: 121 cccgccgccggctggagctccggcgacgacagcgacgacgatgacagcttgctcgacgaa 180 Query: 254 gtgctcgacacgaagcaggtcatactcaacgagatgaggaaccggcagatgaagaagcgg 313 ||||||||||| |||||||| || | |||||||||||||||||||||||||||||| || Sbjct: 181 gtgctcgacaccaagcaggtgatcatgaacgagatgaggaaccggcagatgaagaagagg 240 Query: 314 tcgaggtgcagcgttgactcgccgactctgtcgagcactttcgtctggtctttcactcca 373 ||||||||||| | || || |||| |||||||| | ||||||||||| ||||| || Sbjct: 241 gcgaggtgcagcctggattccccga---tgtcgagcccgttcgtctggtcgttcacgccg 297 Query: 374 ctcgatccgagaagcgttcttgagaag 400 ||||| ||||| |||||||| |||||| Sbjct: 298 ctcgacccgaggagcgttctggagaag 324 Score = 135 bits (68), Expect = 4e-28 Identities = 133/155 (85%), Gaps = 6/155 (3%) Strand = Plus / Plus Query: 570 tggacccgccgcctccgatgcggtcgccggcgatgtgggagggcttcccggactgcgagg 629 |||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 494 tggacccgccgcctcccctgctgtcgccggcgaagtgggaggggctccgtgactgcgagg 553 Query: 630 ggtggccgttcgggctgtgc------catagccccaccgtcctgccgctgccaccgctgc 683 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||| Sbjct: 554 ggtggccgttcgggctgtgccgcctccccggccccgccgtcctgccgctgccgccgctgc 613 Query: 684 ccagcacgccggctgactcgtggaaatggcgcaag 718 ||||||||||||| ||||||||| | ||||||||| Sbjct: 614 ccagcacgccggccgactcgtggcagtggcgcaag 648 Score = 131 bits (66), Expect = 6e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 477 gcgacgccgacgacgagagcgtggcgttcttctctgtgaggagcttcttctcgcgcagca 536 ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct: 392 gcgacgccgacgacgagagcgaggcgttcttctcggtgaagagcttcttctcgcgcagca 451 Query: 537 cgagccgggcggcgaccgtggcgtcgtcgg 566 ||||||| | ||||||||||||||||||| Sbjct: 452 cgagccgtggcgcgaccgtggcgtcgtcgg 481 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 198 bits (100), Expect = 3e-47 Identities = 179/204 (87%), Gaps = 6/204 (2%) Strand = Plus / Plus Query: 76 aacaatgccttgcttggcacaggactaccgccccaagctccccgccaccaaacact---g 132 ||||||||||||| |||||||||| || | |||||||| || |||||||| |||| | Sbjct: 17345378 aacaatgccttgcctggcacaggagtatcatcccaagctaccagccaccaatcactactg 17345437 Query: 133 caagtccctctcctccctcatcaaggagacctacgcgcactgccatgtcccctgcgtcag 192 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| Sbjct: 17345438 caagtccctctcctccctcatcagggagacctacgcccactgccatgtcccctgcgccag 17345497 Query: 193 gatccccgccgccgggtggagctccggcgaggacagcgacgacgacagcagc---ctcaa 249 ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| | Sbjct: 17345498 gatccccgccgccggctggagctccggcgacgacagcgacgacgatgacagcttgctcga 17345557 Query: 250 cgatgtgctcgacacgaagcaggt 273 ||| ||||||||||| |||||||| Sbjct: 17345558 cgaagtgctcgacaccaagcaggt 17345581 Score = 135 bits (68), Expect = 4e-28 Identities = 133/155 (85%), Gaps = 6/155 (3%) Strand = Plus / Plus Query: 570 tggacccgccgcctccgatgcggtcgccggcgatgtgggagggcttcccggactgcgagg 629 |||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 17346006 tggacccgccgcctcccctgctgtcgccggcgaagtgggaggggctccgtgactgcgagg 17346065 Query: 630 ggtggccgttcgggctgtgc------catagccccaccgtcctgccgctgccaccgctgc 683 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||| Sbjct: 17346066 ggtggccgttcgggctgtgccgcctccccggccccgccgtcctgccgctgccgccgctgc 17346125 Query: 684 ccagcacgccggctgactcgtggaaatggcgcaag 718 ||||||||||||| ||||||||| | ||||||||| Sbjct: 17346126 ccagcacgccggccgactcgtggcagtggcgcaag 17346160 Score = 131 bits (66), Expect = 6e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 477 gcgacgccgacgacgagagcgtggcgttcttctctgtgaggagcttcttctcgcgcagca 536 ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct: 17345904 gcgacgccgacgacgagagcgaggcgttcttctcggtgaagagcttcttctcgcgcagca 17345963 Query: 537 cgagccgggcggcgaccgtggcgtcgtcgg 566 ||||||| | ||||||||||||||||||| Sbjct: 17345964 cgagccgtggcgcgaccgtggcgtcgtcgg 17345993 Score = 99.6 bits (50), Expect = 2e-17 Identities = 103/120 (85%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 281 aacgagatgaggaaccggcagatgaagaagcggtcgaggtgcagcgttgactcgccgact 340 |||||||||||||||||||||||||||||| || ||||||||||| | || || |||| Sbjct: 17345720 aacgagatgaggaaccggcagatgaagaagagggcgaggtgcagcctggattccccga-- 17345777 Query: 341 ctgtcgagcactttcgtctggtctttcactccactcgatccgagaagcgttcttgagaag 400 |||||||| | ||||||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 17345778 -tgtcgagcccgttcgtctggtcgttcacgccgctcgacccgaggagcgttctggagaag 17345836 >dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 198 bits (100), Expect = 3e-47 Identities = 179/204 (87%), Gaps = 6/204 (2%) Strand = Plus / Plus Query: 76 aacaatgccttgcttggcacaggactaccgccccaagctccccgccaccaaacact---g 132 ||||||||||||| |||||||||| || | |||||||| || |||||||| |||| | Sbjct: 132250 aacaatgccttgcctggcacaggagtatcatcccaagctaccagccaccaatcactactg 132309 Query: 133 caagtccctctcctccctcatcaaggagacctacgcgcactgccatgtcccctgcgtcag 192 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| Sbjct: 132310 caagtccctctcctccctcatcagggagacctacgcccactgccatgtcccctgcgccag 132369 Query: 193 gatccccgccgccgggtggagctccggcgaggacagcgacgacgacagcagc---ctcaa 249 ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| | Sbjct: 132370 gatccccgccgccggctggagctccggcgacgacagcgacgacgatgacagcttgctcga 132429 Query: 250 cgatgtgctcgacacgaagcaggt 273 ||| ||||||||||| |||||||| Sbjct: 132430 cgaagtgctcgacaccaagcaggt 132453 Score = 135 bits (68), Expect = 4e-28 Identities = 133/155 (85%), Gaps = 6/155 (3%) Strand = Plus / Plus Query: 570 tggacccgccgcctccgatgcggtcgccggcgatgtgggagggcttcccggactgcgagg 629 |||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 132878 tggacccgccgcctcccctgctgtcgccggcgaagtgggaggggctccgtgactgcgagg 132937 Query: 630 ggtggccgttcgggctgtgc------catagccccaccgtcctgccgctgccaccgctgc 683 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||| Sbjct: 132938 ggtggccgttcgggctgtgccgcctccccggccccgccgtcctgccgctgccgccgctgc 132997 Query: 684 ccagcacgccggctgactcgtggaaatggcgcaag 718 ||||||||||||| ||||||||| | ||||||||| Sbjct: 132998 ccagcacgccggccgactcgtggcagtggcgcaag 133032 Score = 131 bits (66), Expect = 6e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 477 gcgacgccgacgacgagagcgtggcgttcttctctgtgaggagcttcttctcgcgcagca 536 ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct: 132776 gcgacgccgacgacgagagcgaggcgttcttctcggtgaagagcttcttctcgcgcagca 132835 Query: 537 cgagccgggcggcgaccgtggcgtcgtcgg 566 ||||||| | ||||||||||||||||||| Sbjct: 132836 cgagccgtggcgcgaccgtggcgtcgtcgg 132865 Score = 99.6 bits (50), Expect = 2e-17 Identities = 103/120 (85%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 281 aacgagatgaggaaccggcagatgaagaagcggtcgaggtgcagcgttgactcgccgact 340 |||||||||||||||||||||||||||||| || ||||||||||| | || || |||| Sbjct: 132592 aacgagatgaggaaccggcagatgaagaagagggcgaggtgcagcctggattccccga-- 132649 Query: 341 ctgtcgagcactttcgtctggtctttcactccactcgatccgagaagcgttcttgagaag 400 |||||||| | ||||||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 132650 -tgtcgagcccgttcgtctggtcgttcacgccgctcgacccgaggagcgttctggagaag 132708 >dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 198 bits (100), Expect = 3e-47 Identities = 179/204 (87%), Gaps = 6/204 (2%) Strand = Plus / Plus Query: 76 aacaatgccttgcttggcacaggactaccgccccaagctccccgccaccaaacact---g 132 ||||||||||||| |||||||||| || | |||||||| || |||||||| |||| | Sbjct: 69291 aacaatgccttgcctggcacaggagtatcatcccaagctaccagccaccaatcactactg 69350 Query: 133 caagtccctctcctccctcatcaaggagacctacgcgcactgccatgtcccctgcgtcag 192 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| Sbjct: 69351 caagtccctctcctccctcatcagggagacctacgcccactgccatgtcccctgcgccag 69410 Query: 193 gatccccgccgccgggtggagctccggcgaggacagcgacgacgacagcagc---ctcaa 249 ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||| | Sbjct: 69411 gatccccgccgccggctggagctccggcgacgacagcgacgacgatgacagcttgctcga 69470 Query: 250 cgatgtgctcgacacgaagcaggt 273 ||| ||||||||||| |||||||| Sbjct: 69471 cgaagtgctcgacaccaagcaggt 69494 Score = 135 bits (68), Expect = 4e-28 Identities = 133/155 (85%), Gaps = 6/155 (3%) Strand = Plus / Plus Query: 570 tggacccgccgcctccgatgcggtcgccggcgatgtgggagggcttcccggactgcgagg 629 |||||||||||||||| ||| ||||||||||| ||||||||| ||| |||||||||| Sbjct: 69919 tggacccgccgcctcccctgctgtcgccggcgaagtgggaggggctccgtgactgcgagg 69978 Query: 630 ggtggccgttcgggctgtgc------catagccccaccgtcctgccgctgccaccgctgc 683 |||||||||||||||||||| | ||||| |||||||||||||||| ||||||| Sbjct: 69979 ggtggccgttcgggctgtgccgcctccccggccccgccgtcctgccgctgccgccgctgc 70038 Query: 684 ccagcacgccggctgactcgtggaaatggcgcaag 718 ||||||||||||| ||||||||| | ||||||||| Sbjct: 70039 ccagcacgccggccgactcgtggcagtggcgcaag 70073 Score = 131 bits (66), Expect = 6e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 477 gcgacgccgacgacgagagcgtggcgttcttctctgtgaggagcttcttctcgcgcagca 536 ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct: 69817 gcgacgccgacgacgagagcgaggcgttcttctcggtgaagagcttcttctcgcgcagca 69876 Query: 537 cgagccgggcggcgaccgtggcgtcgtcgg 566 ||||||| | ||||||||||||||||||| Sbjct: 69877 cgagccgtggcgcgaccgtggcgtcgtcgg 69906 Score = 99.6 bits (50), Expect = 2e-17 Identities = 103/120 (85%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 281 aacgagatgaggaaccggcagatgaagaagcggtcgaggtgcagcgttgactcgccgact 340 |||||||||||||||||||||||||||||| || ||||||||||| | || || |||| Sbjct: 69633 aacgagatgaggaaccggcagatgaagaagagggcgaggtgcagcctggattccccga-- 69690 Query: 341 ctgtcgagcactttcgtctggtctttcactccactcgatccgagaagcgttcttgagaag 400 |||||||| | ||||||||||| ||||| || ||||| ||||| |||||||| |||||| Sbjct: 69691 -tgtcgagcccgttcgtctggtcgttcacgccgctcgacccgaggagcgttctggagaag 69749