BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055e08 (1165 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT828652.1| Oryza sativa (indica cultivar-group) cDNA clone:... 250 1e-62 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 emb|CT828651.1| Oryza sativa (indica cultivar-group) cDNA clone:... 196 1e-46 >emb|CT828652.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029M10, full insert sequence Length = 1198 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Plus Query: 565 ccgccggcgagccgccggtgctgaaggagaggaaggtgaaggagcggctccgtgtgctgg 624 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 606 ccgccggcgagcccccgatgctgaaggagaggaaggtgaaggagcgcctccgcgtgctgg 665 Query: 625 gccggctcgtcccgggctgccggaagctgccggcaccggacctgctcgaggagacggccg 684 |||| |||||||| || ||||||||||| || || |||| ||||||||||||||||||| Sbjct: 666 gccgcctcgtccccggatgccggaagctccccgcgccggcgctgctcgaggagacggccg 725 Query: 685 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgcgctggccgacgcgctcg 744 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 726 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgccctcgccgacgcgctcg 785 Query: 745 cggcggcccagctatccccaccgccgcctccacaggcggaggaggcggccgccggcgacg 804 | || || ||||| ||| || | |||| ||| || |||||| |||||| |||| Sbjct: 786 ccgccgcgcagctctcc---tcgtcaactccgcagcaggcggaggccgccgcc---gacg 839 Query: 805 aggccgagatggagaggtgagggttt 830 || ||||||||||||||||||||||| Sbjct: 840 agaccgagatggagaggtgagggttt 865 Score = 200 bits (101), Expect = 9e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 327 ggcgggggcgcgcctccgcagccgcgcgccgtgaaggcggcggccgactcggcgctggcg 386 |||||||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 359 ggcgggggcgcgccgccgcagccgcgggcggtgaaggccgcggcggactcggcgctggcg 418 Query: 387 ctcaccgcgcgcgggcagtcgcgctggagccgcgccatcctgctggccggcgcggcctcc 446 ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || Sbjct: 419 ctcaccgcgcgggggcagtcgaggtggagccgcgccatcctgctggccggcgcggcgtcg 478 Query: 447 tgccgccgccgcgtgctcatcaaggccggcggcaatatccgccgc 491 | | | |||||||||||| ||||||||||||| || ||||||||| Sbjct: 479 tccaggcgccgcgtgctcgtcaaggccggcgggaagatccgccgc 523 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 955 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctgctctcttct 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1075 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctcctctcttgt 1134 Query: 1015 ttt 1017 ||| Sbjct: 1135 ttt 1137 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 248 gaccaagtggcggagcggcacgcaggagaggatctacggccggcgcctgctggacgcgct 307 |||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 268 gaccaagtggaggagcggcgcgcaggagaggatctacgggcggcgcctgctcgacgcgct 327 Query: 308 ccgcgcgacgcggg 321 || || ||||||| Sbjct: 328 gcgggccacgcggg 341 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 873 aaaatgagggtgattaattagtgggattattattgcgagggggtttgggatttgaggagg 932 ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 947 aaaataagggcgattaattagtgg-attattattgcgagagggtttgggatttgaggagg 1005 Query: 933 gta 935 ||| Sbjct: 1006 gta 1008 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Minus Query: 565 ccgccggcgagccgccggtgctgaaggagaggaaggtgaaggagcggctccgtgtgctgg 624 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 7903066 ccgccggcgagcccccgatgctgaaggagaggaaggtgaaggagcgcctccgcgtgctgg 7903007 Query: 625 gccggctcgtcccgggctgccggaagctgccggcaccggacctgctcgaggagacggccg 684 |||| |||||||| || ||||||||||| || || |||| ||||||||||||||||||| Sbjct: 7903006 gccgcctcgtccccggatgccggaagctccccgcgccggcgctgctcgaggagacggccg 7902947 Query: 685 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgcgctggccgacgcgctcg 744 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 7902946 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgccctcgccgacgcgctcg 7902887 Query: 745 cggcggcccagctatccccaccgccgcctccacaggcggaggaggcggccgccggcgacg 804 | || || ||||| ||| || | |||| ||| || |||||| |||||| |||| Sbjct: 7902886 ccgccgcgcagctctcc---tcgtcaactccgcagcaggcggaggccgccgcc---gacg 7902833 Query: 805 aggccgagatggagaggtgagggttt 830 || ||||||||||||||||||||||| Sbjct: 7902832 agaccgagatggagaggtgagggttt 7902807 Score = 200 bits (101), Expect = 9e-48 Identities = 149/165 (90%) Strand = Plus / Minus Query: 327 ggcgggggcgcgcctccgcagccgcgcgccgtgaaggcggcggccgactcggcgctggcg 386 |||||||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 7903313 ggcgggggcgcgccgccgcagccgcgggcggtgaaggccgcggcggactcggcgctggcg 7903254 Query: 387 ctcaccgcgcgcgggcagtcgcgctggagccgcgccatcctgctggccggcgcggcctcc 446 ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || Sbjct: 7903253 ctcaccgcgcgggggcagtcgaggtggagccgcgccatcctgctggccggcgcggcgtcg 7903194 Query: 447 tgccgccgccgcgtgctcatcaaggccggcggcaatatccgccgc 491 | | | |||||||||||| ||||||||||||| || ||||||||| Sbjct: 7903193 tccaggcgccgcgtgctcgtcaaggccggcgggaagatccgccgc 7903149 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 955 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctgctctcttct 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 7902597 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctcctctcttgt 7902538 Query: 1015 ttt 1017 ||| Sbjct: 7902537 ttt 7902535 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 248 gaccaagtggcggagcggcacgcaggagaggatctacggccggcgcctgctggacgcgct 307 |||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 7903404 gaccaagtggaggagcggcgcgcaggagaggatctacgggcggcgcctgctcgacgcgct 7903345 Query: 308 ccgcgcgacgcggg 321 || || ||||||| Sbjct: 7903344 gcgggccacgcggg 7903331 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 873 aaaatgagggtgattaattagtgggattattattgcgagggggtttgggatttgaggagg 932 ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 7902725 aaaataagggcgattaattagtgg-attattattgcgagagggtttgggatttgaggagg 7902667 Query: 933 gta 935 ||| Sbjct: 7902666 gta 7902664 >dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Minus Query: 565 ccgccggcgagccgccggtgctgaaggagaggaaggtgaaggagcggctccgtgtgctgg 624 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 98012 ccgccggcgagcccccgatgctgaaggagaggaaggtgaaggagcgcctccgcgtgctgg 97953 Query: 625 gccggctcgtcccgggctgccggaagctgccggcaccggacctgctcgaggagacggccg 684 |||| |||||||| || ||||||||||| || || |||| ||||||||||||||||||| Sbjct: 97952 gccgcctcgtccccggatgccggaagctccccgcgccggcgctgctcgaggagacggccg 97893 Query: 685 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgcgctggccgacgcgctcg 744 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 97892 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgccctcgccgacgcgctcg 97833 Query: 745 cggcggcccagctatccccaccgccgcctccacaggcggaggaggcggccgccggcgacg 804 | || || ||||| ||| || | |||| ||| || |||||| |||||| |||| Sbjct: 97832 ccgccgcgcagctctcc---tcgtcaactccgcagcaggcggaggccgccgcc---gacg 97779 Query: 805 aggccgagatggagaggtgagggttt 830 || ||||||||||||||||||||||| Sbjct: 97778 agaccgagatggagaggtgagggttt 97753 Score = 200 bits (101), Expect = 9e-48 Identities = 149/165 (90%) Strand = Plus / Minus Query: 327 ggcgggggcgcgcctccgcagccgcgcgccgtgaaggcggcggccgactcggcgctggcg 386 |||||||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 98259 ggcgggggcgcgccgccgcagccgcgggcggtgaaggccgcggcggactcggcgctggcg 98200 Query: 387 ctcaccgcgcgcgggcagtcgcgctggagccgcgccatcctgctggccggcgcggcctcc 446 ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || Sbjct: 98199 ctcaccgcgcgggggcagtcgaggtggagccgcgccatcctgctggccggcgcggcgtcg 98140 Query: 447 tgccgccgccgcgtgctcatcaaggccggcggcaatatccgccgc 491 | | | |||||||||||| ||||||||||||| || ||||||||| Sbjct: 98139 tccaggcgccgcgtgctcgtcaaggccggcgggaagatccgccgc 98095 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 955 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctgctctcttct 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 97543 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctcctctcttgt 97484 Query: 1015 ttt 1017 ||| Sbjct: 97483 ttt 97481 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 248 gaccaagtggcggagcggcacgcaggagaggatctacggccggcgcctgctggacgcgct 307 |||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 98350 gaccaagtggaggagcggcgcgcaggagaggatctacgggcggcgcctgctcgacgcgct 98291 Query: 308 ccgcgcgacgcggg 321 || || ||||||| Sbjct: 98290 gcgggccacgcggg 98277 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 873 aaaatgagggtgattaattagtgggattattattgcgagggggtttgggatttgaggagg 932 ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 97671 aaaataagggcgattaattagtgg-attattattgcgagagggtttgggatttgaggagg 97613 Query: 933 gta 935 ||| Sbjct: 97612 gta 97610 >dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 250 bits (126), Expect = 1e-62 Identities = 232/266 (87%), Gaps = 6/266 (2%) Strand = Plus / Minus Query: 565 ccgccggcgagccgccggtgctgaaggagaggaaggtgaaggagcggctccgtgtgctgg 624 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 9378 ccgccggcgagcccccgatgctgaaggagaggaaggtgaaggagcgcctccgcgtgctgg 9319 Query: 625 gccggctcgtcccgggctgccggaagctgccggcaccggacctgctcgaggagacggccg 684 |||| |||||||| || ||||||||||| || || |||| ||||||||||||||||||| Sbjct: 9318 gccgcctcgtccccggatgccggaagctccccgcgccggcgctgctcgaggagacggccg 9259 Query: 685 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgcgctggccgacgcgctcg 744 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 9258 actacgtggccgcgctggagatgcaggtcaaggccatgcgcgccctcgccgacgcgctcg 9199 Query: 745 cggcggcccagctatccccaccgccgcctccacaggcggaggaggcggccgccggcgacg 804 | || || ||||| ||| || | |||| ||| || |||||| |||||| |||| Sbjct: 9198 ccgccgcgcagctctcc---tcgtcaactccgcagcaggcggaggccgccgcc---gacg 9145 Query: 805 aggccgagatggagaggtgagggttt 830 || ||||||||||||||||||||||| Sbjct: 9144 agaccgagatggagaggtgagggttt 9119 Score = 200 bits (101), Expect = 9e-48 Identities = 149/165 (90%) Strand = Plus / Minus Query: 327 ggcgggggcgcgcctccgcagccgcgcgccgtgaaggcggcggccgactcggcgctggcg 386 |||||||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||| Sbjct: 9625 ggcgggggcgcgccgccgcagccgcgggcggtgaaggccgcggcggactcggcgctggcg 9566 Query: 387 ctcaccgcgcgcgggcagtcgcgctggagccgcgccatcctgctggccggcgcggcctcc 446 ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || Sbjct: 9565 ctcaccgcgcgggggcagtcgaggtggagccgcgccatcctgctggccggcgcggcgtcg 9506 Query: 447 tgccgccgccgcgtgctcatcaaggccggcggcaatatccgccgc 491 | | | |||||||||||| ||||||||||||| || ||||||||| Sbjct: 9505 tccaggcgccgcgtgctcgtcaaggccggcgggaagatccgccgc 9461 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 955 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctgctctcttct 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 8909 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctcctctcttgt 8850 Query: 1015 ttt 1017 ||| Sbjct: 8849 ttt 8847 Score = 91.7 bits (46), Expect = 6e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 248 gaccaagtggcggagcggcacgcaggagaggatctacggccggcgcctgctggacgcgct 307 |||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 9716 gaccaagtggaggagcggcgcgcaggagaggatctacgggcggcgcctgctcgacgcgct 9657 Query: 308 ccgcgcgacgcggg 321 || || ||||||| Sbjct: 9656 gcgggccacgcggg 9643 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 873 aaaatgagggtgattaattagtgggattattattgcgagggggtttgggatttgaggagg 932 ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9037 aaaataagggcgattaattagtgg-attattattgcgagagggtttgggatttgaggagg 8979 Query: 933 gta 935 ||| Sbjct: 8978 gta 8976 >emb|CT828651.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI020P06, full insert sequence Length = 763 Score = 196 bits (99), Expect = 1e-46 Identities = 199/231 (86%), Gaps = 6/231 (2%) Strand = Plus / Plus Query: 600 gtgaaggagcggctccgtgtgctgggccggctcgtcccgggctgccggaagctgccggca 659 ||||||||||| ||||| ||||||||||| |||||||| || ||||||||||| || || Sbjct: 267 gtgaaggagcgcctccgcgtgctgggccgcctcgtccccggatgccggaagctccccgcg 326 Query: 660 ccggacctgctcgaggagacggccgactacgtggccgcgctggagatgcaggtcaaggcc 719 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 ccggcgctgctcgaggagacggccgactacgtggccgcgctggagatgcaggtcaaggcc 386 Query: 720 atgcgcgcgctggccgacgcgctcgcggcggcccagctatccccaccgccgcctccacag 779 |||||||| || |||||||||||||| || || ||||| ||| || | |||| ||| Sbjct: 387 atgcgcgccctcgccgacgcgctcgccgccgcgcagctctcc---tcgtcaactccgcag 443 Query: 780 gcggaggaggcggccgccggcgacgaggccgagatggagaggtgagggttt 830 || |||||| |||||| |||||| ||||||||||||||||||||||| Sbjct: 444 caggcggaggccgccgcc---gacgagaccgagatggagaggtgagggttt 491 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 955 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctgctctcttct 1014 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 701 gatgatgatttgtaaattcttgatacttgtataagtaatgctgctctgctcctctcttgt 760 Query: 1015 ttt 1017 ||| Sbjct: 761 ttt 763 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 873 aaaatgagggtgattaattagtgggattattattgcgagggggtttgggatttgaggagg 932 ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 573 aaaataagggcgattaattagtgg-attattattgcgagagggtttgggatttgaggagg 631 Query: 933 gta 935 ||| Sbjct: 632 gta 634