BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055b22 (1481 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072865.1| Oryza sativa (japonica cultivar-group) Os12g... 438 e-119 dbj|AK068710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-119 emb|CT829345.1| Oryza sativa (indica cultivar-group) cDNA clone:... 434 e-118 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 218 5e-53 emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa... 218 5e-53 >ref|NM_001072865.1| Oryza sativa (japonica cultivar-group) Os12g0189300 (Os12g0189300) mRNA, complete cds Length = 1572 Score = 438 bits (221), Expect = e-119 Identities = 616/745 (82%), Gaps = 2/745 (0%) Strand = Plus / Plus Query: 300 ttcatctccggctacgccgtctcggccgctcttctcggcaagcccgacgtcggcctcctc 359 ||||||||||||||||||||||| | | | | ||||||| |||||||||||||||||| Sbjct: 242 ttcatctccggctacgccgtctccggctccttcctcggcacccccgacgtcggcctcctc 301 Query: 360 acgccgccggagatggcggaggtggcgaggcgcgtgtgcgcttctgcgccgctcgtccca 419 |||||||||||||||||||||||||||||||| | ||||| || ||||| | | Sbjct: 302 acgccgccggagatggcggaggtggcgaggcggatctgcgcgtcggcgcccaacacactc 361 Query: 420 ttcatcgcggatgccgatactggtggtggtagtgctctgaacgtgcagcgtactgttcaa 479 |||||||| || ||||| ||||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 362 ttcatcgccgacgccgacactggtggtggcaatgctctgaatgtgaagcgtactgttcag 421 Query: 480 gatctgattgcagcaggtgctgcaggctgctttcttgaggatcaagcatggccaaagaaa 539 || ||||| ||||||||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 422 gacctgatggcagcaggtgctgcaggctgcttcctcgaggaccaggcatggccaaagaag 481 Query: 540 tgtggacacatgcgtggtaaaaaggtggtaccgccagaagagcatgctgtgaaaatagct 599 ||||||||||||| ||| || ||||| |||| |||| ||||| |||||||| |||||| Sbjct: 482 tgtggacacatgcatggcaagcaggtgataccagcagaggagcacgctgtgaagatagct 541 Query: 600 gctgccagagaagctgttggcgatcaggacttcttcattgtggctcgtactgacgctcga 659 || || ||||| | ||||| |||| ||||||||| || ||||| || |||||||||||| Sbjct: 542 gcagcgagagaggtcgttggtgatcgggacttctttatcgtggcccggactgacgctcga 601 Query: 660 tc-gacaatgggcctggccgatgccattgcacgcgccaacctgtacatggacgcaggagc 718 || | || ||| | || ||||||||| || ||||| || ||||| || || ||||| Sbjct: 602 tctgtcactggtcttgat-gatgccattaggcgtgccaatctctacatagatgcgggagc 660 Query: 719 agatgggtgcttcgtggaggctccgaggaacgacgacgagctgagggagatcgcccgcaa 778 ||| | ||||||||||||||| ||| ||| |||||| ||||||| ||||||| | | | Sbjct: 661 agacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgcaggag 720 Query: 779 gacgagggggtaccgcgtctgcaacatgctggagggcgggaccacgccgctgcacacccg 838 ||| | ||| || ||||| |||||||||||||||||||||| |||||||||||||| | Sbjct: 721 gaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcacacgag 780 Query: 839 tcaggagctcatggagatggggtttcacctgatcaagtgccccctcaccaccgtctacgc 898 ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 781 gcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtctacgc 840 Query: 899 caccgcccgcgccctcgtcgacatcctcaagaccctcaaggacgctggcacaaccagggg 958 |||||||||||||||||||| ||||| |||||||| ||| | || ||| | | Sbjct: 841 tgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacccgcga 900 Query: 959 cgagctccacaggctcacgtcctttgaggagttcaacaacctcgtcggcctcgagtcctg 1018 |||||||||| | ||||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 901 cgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgactcctg 960 Query: 1019 gaacgacctcgaggcgcgcttctcc 1043 | |||| |||||| ||||||||| Sbjct: 961 gctcgacatcgaggttcgcttctcc 985 >dbj|AK068710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159K10, full insert sequence Length = 1573 Score = 438 bits (221), Expect = e-119 Identities = 616/745 (82%), Gaps = 2/745 (0%) Strand = Plus / Plus Query: 300 ttcatctccggctacgccgtctcggccgctcttctcggcaagcccgacgtcggcctcctc 359 ||||||||||||||||||||||| | | | | ||||||| |||||||||||||||||| Sbjct: 243 ttcatctccggctacgccgtctccggctccttcctcggcacccccgacgtcggcctcctc 302 Query: 360 acgccgccggagatggcggaggtggcgaggcgcgtgtgcgcttctgcgccgctcgtccca 419 |||||||||||||||||||||||||||||||| | ||||| || ||||| | | Sbjct: 303 acgccgccggagatggcggaggtggcgaggcggatctgcgcgtcggcgcccaacacactc 362 Query: 420 ttcatcgcggatgccgatactggtggtggtagtgctctgaacgtgcagcgtactgttcaa 479 |||||||| || ||||| ||||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 363 ttcatcgccgacgccgacactggtggtggcaatgctctgaatgtgaagcgtactgttcag 422 Query: 480 gatctgattgcagcaggtgctgcaggctgctttcttgaggatcaagcatggccaaagaaa 539 || ||||| ||||||||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 423 gacctgatggcagcaggtgctgcaggctgcttcctcgaggaccaggcatggccaaagaag 482 Query: 540 tgtggacacatgcgtggtaaaaaggtggtaccgccagaagagcatgctgtgaaaatagct 599 ||||||||||||| ||| || ||||| |||| |||| ||||| |||||||| |||||| Sbjct: 483 tgtggacacatgcatggcaagcaggtgataccagcagaggagcacgctgtgaagatagct 542 Query: 600 gctgccagagaagctgttggcgatcaggacttcttcattgtggctcgtactgacgctcga 659 || || ||||| | ||||| |||| ||||||||| || ||||| || |||||||||||| Sbjct: 543 gcagcgagagaggtcgttggtgatcgggacttctttatcgtggcccggactgacgctcga 602 Query: 660 tc-gacaatgggcctggccgatgccattgcacgcgccaacctgtacatggacgcaggagc 718 || | || ||| | || ||||||||| || ||||| || ||||| || || ||||| Sbjct: 603 tctgtcactggtcttgat-gatgccattaggcgtgccaatctctacatagatgcgggagc 661 Query: 719 agatgggtgcttcgtggaggctccgaggaacgacgacgagctgagggagatcgcccgcaa 778 ||| | ||||||||||||||| ||| ||| |||||| ||||||| ||||||| | | | Sbjct: 662 agacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgcaggag 721 Query: 779 gacgagggggtaccgcgtctgcaacatgctggagggcgggaccacgccgctgcacacccg 838 ||| | ||| || ||||| |||||||||||||||||||||| |||||||||||||| | Sbjct: 722 gaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcacacgag 781 Query: 839 tcaggagctcatggagatggggtttcacctgatcaagtgccccctcaccaccgtctacgc 898 ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 782 gcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtctacgc 841 Query: 899 caccgcccgcgccctcgtcgacatcctcaagaccctcaaggacgctggcacaaccagggg 958 |||||||||||||||||||| ||||| |||||||| ||| | || ||| | | Sbjct: 842 tgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacccgcga 901 Query: 959 cgagctccacaggctcacgtcctttgaggagttcaacaacctcgtcggcctcgagtcctg 1018 |||||||||| | ||||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 902 cgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgactcctg 961 Query: 1019 gaacgacctcgaggcgcgcttctcc 1043 | |||| |||||| ||||||||| Sbjct: 962 gctcgacatcgaggttcgcttctcc 986 >emb|CT829345.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA054P17, full insert sequence Length = 972 Score = 434 bits (219), Expect = e-118 Identities = 566/679 (83%), Gaps = 2/679 (0%) Strand = Plus / Plus Query: 249 tacgacgcgctctcggcggccatcgtgcagaagagcggcctccccggggggttcatctcc 308 ||||||||||| |||||||| ||||| ||||||| ||| || || || ||||||||| Sbjct: 278 tacgacgcgctgtcggcggcgatcgtccagaagaccgggttctacgccggcttcatctcc 337 Query: 309 ggctacgccgtctcggccgctcttctcggcaagcccgacgtcggcctcctcacgccgccg 368 |||||||||||||| | | | | ||||||| ||||||||||||||||||||||||||| Sbjct: 338 ggctacgccgtctccggctccttcctcggcacccccgacgtcggcctcctcacgccgccg 397 Query: 369 gagatggcggaggtggcgaggcgcgtgtgcgcttctgcgccgctcgtcccattcatcgcg 428 |||||||| |||||||||||||| | ||||| || ||||| | || |||||||| Sbjct: 398 gagatggcagaggtggcgaggcggatctgcgcgtcggcgcccaacaccctcttcatcgcc 457 Query: 429 gatgccgatactggtggtggtagtgctctgaacgtgcagcgtactgttcaagatctgatt 488 || ||||| |||||||| || | ||||||||| ||| ||||||||||||| || ||||| Sbjct: 458 gacgccgacactggtggcggcaatgctctgaatgtgaagcgtactgttcaggacctgatg 517 Query: 489 gcagcaggtgctgcaggctgctttcttgaggatcaagcatggccaaagaaatgtggacac 548 ||||||||||||||||||||||| || ||||| || |||||||||||||| ||||||||| Sbjct: 518 gcagcaggtgctgcaggctgcttcctcgaggaccaggcatggccaaagaagtgtggacac 577 Query: 549 atgcgtggtaaaaaggtggtaccgccagaagagcatgctgtgaaaatagctgctgccaga 608 |||| ||| || ||||| |||| |||| ||||| |||||||| |||||||| || ||| Sbjct: 578 atgcatggcaagcaggtgataccagcagaggagcacgctgtgaagatagctgcagcgaga 637 Query: 609 gaagctgttggcgatcaggacttcttcattgtggctcgtactgacgctcgatc-gacaat 667 || | ||||| |||| ||||||||| || ||||| || |||||||||||||| | || | Sbjct: 638 gaggtcgttggtgatcgggacttctttatcgtggcccggactgacgctcgatctgtcact 697 Query: 668 gggcctggccgatgccattgcacgcgccaacctgtacatggacgcaggagcagatgggtg 727 || | || ||||||||| || ||||| || ||||| || || |||||||| | ||| Sbjct: 698 ggtcttgat-gatgccattaggcgtgccaatctctacatagatgcgggagcagacgcgtg 756 Query: 728 cttcgtggaggctccgaggaacgacgacgagctgagggagatcgcccgcaagacgagggg 787 |||||||||||| ||| ||| |||||| ||||||| ||||||| | | | ||| | ||| Sbjct: 757 cttcgtggaggcgccgcggagcgacgaggagctgatggagatctgcaggaggaccaaggg 816 Query: 788 gtaccgcgtctgcaacatgctggagggcgggaccacgccgctgcacacccgtcaggagct 847 || ||||| |||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct: 817 ttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcacacgaggcaggagct 876 Query: 848 catggagatggggtttcacctgatcaagtgccccctcaccaccgtctacgccaccgcccg 907 ||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||| Sbjct: 877 catggagatggggttccacctcatcaagtcccccctcaccaccgtctacgccgccgcccg 936 Query: 908 cgccctcgtcgacatcctc 926 ||||||||||||| ||||| Sbjct: 937 cgccctcgtcgacgtcctc 955 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 218 bits (110), Expect = 5e-53 Identities = 275/330 (83%) Strand = Plus / Plus Query: 714 ggagcagatgggtgcttcgtggaggctccgaggaacgacgacgagctgagggagatcgcc 773 |||||||| | ||||||||||||||| ||| ||| |||||| ||||||| ||||||| | Sbjct: 4501997 ggagcagacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgc 4502056 Query: 774 cgcaagacgagggggtaccgcgtctgcaacatgctggagggcgggaccacgccgctgcac 833 | | ||| | ||| || ||||| |||||||||||||||||||||| |||||||||||| Sbjct: 4502057 aggaggaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcac 4502116 Query: 834 acccgtcaggagctcatggagatggggtttcacctgatcaagtgccccctcaccaccgtc 893 || | ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct: 4502117 acgaggcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtc 4502176 Query: 894 tacgccaccgcccgcgccctcgtcgacatcctcaagaccctcaaggacgctggcacaacc 953 ||||| |||||||||||||||||||| ||||| |||||||| ||| | || ||| Sbjct: 4502177 tacgctgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacc 4502236 Query: 954 aggggcgagctccacaggctcacgtcctttgaggagttcaacaacctcgtcggcctcgag 1013 | | |||||||||| | ||||| |||| |||||||||||||||||||||||||| Sbjct: 4502237 cgcgacgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgac 4502296 Query: 1014 tcctggaacgacctcgaggcgcgcttctcc 1043 |||||| |||| |||||| ||||||||| Sbjct: 4502297 tcctggctcgacatcgaggttcgcttctcc 4502326 Score = 91.7 bits (46), Expect = 8e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 438 actggtggtggtagtgctctgaacgtgcagcgtactgttcaagatctgattgcagcaggt 497 ||||||||||| | ||||||||| ||| ||||||||||||| || ||||| ||||||||| Sbjct: 4500049 actggtggtggcaatgctctgaatgtgaagcgtactgttcaggacctgatggcagcaggt 4500108 Query: 498 gctgcaggctgctt 511 |||||||||||||| Sbjct: 4500109 gctgcaggctgctt 4500122 >emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 218 bits (110), Expect = 5e-53 Identities = 275/330 (83%) Strand = Plus / Minus Query: 714 ggagcagatgggtgcttcgtggaggctccgaggaacgacgacgagctgagggagatcgcc 773 |||||||| | ||||||||||||||| ||| ||| |||||| ||||||| ||||||| | Sbjct: 2499 ggagcagacgcgtgcttcgtggaggcgccgcggagcgacgaggagctgatggagatctgc 2440 Query: 774 cgcaagacgagggggtaccgcgtctgcaacatgctggagggcgggaccacgccgctgcac 833 | | ||| | ||| || ||||| |||||||||||||||||||||| |||||||||||| Sbjct: 2439 aggaggaccaagggttatcgcgtgtgcaacatgctggagggcgggaagacgccgctgcac 2380 Query: 834 acccgtcaggagctcatggagatggggtttcacctgatcaagtgccccctcaccaccgtc 893 || | ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct: 2379 acgaggcaggagctcatggagatggggttccacctcatcaagtcccccctcaccaccgtc 2320 Query: 894 tacgccaccgcccgcgccctcgtcgacatcctcaagaccctcaaggacgctggcacaacc 953 ||||| |||||||||||||||||||| ||||| |||||||| ||| | || ||| Sbjct: 2319 tacgctgccgcccgcgccctcgtcgacgtcctcgccgccctcaagcgcgccgagaccacc 2260 Query: 954 aggggcgagctccacaggctcacgtcctttgaggagttcaacaacctcgtcggcctcgag 1013 | | |||||||||| | ||||| |||| |||||||||||||||||||||||||| Sbjct: 2259 cgcgacgagctccaccgcctcaccaccttcaccgagttcaacaacctcgtcggcctcgac 2200 Query: 1014 tcctggaacgacctcgaggcgcgcttctcc 1043 |||||| |||| |||||| ||||||||| Sbjct: 2199 tcctggctcgacatcgaggttcgcttctcc 2170 Score = 91.7 bits (46), Expect = 8e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 438 actggtggtggtagtgctctgaacgtgcagcgtactgttcaagatctgattgcagcaggt 497 ||||||||||| | ||||||||| ||| ||||||||||||| || ||||| ||||||||| Sbjct: 4447 actggtggtggcaatgctctgaatgtgaagcgtactgttcaggacctgatggcagcaggt 4388 Query: 498 gctgcaggctgctt 511 |||||||||||||| Sbjct: 4387 gctgcaggctgctt 4374