BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf054h22 (1020 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055746.1| Oryza sativa (japonica cultivar-group) Os03g... 801 0.0 dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 801 0.0 gb|AY108960.1| Zea mays PCO105999 mRNA sequence 690 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 361 4e-96 gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 361 4e-96 >ref|NM_001055746.1| Oryza sativa (japonica cultivar-group) Os03g0187600 (Os03g0187600) mRNA, complete cds Length = 1134 Score = 801 bits (404), Expect = 0.0 Identities = 640/719 (89%), Gaps = 6/719 (0%) Strand = Plus / Plus Query: 168 cggagtacgcgccctatccgaggctctcgccagaggacgtggccccgcctccgcctcccc 227 |||| ||||||| ||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 233 cggactacgcgcactacccgaggctctcgccggaggacgtggccccgcccccccctccgt 292 Query: 228 cttaccacgc------ctcctccgcacctcccttctcaggcaacccctacgtctcctccc 281 | |||||||| ||||||||| || |||| ||| |||||||||||||||||||| | Sbjct: 293 cctaccacgctgccgcctcctccgcgccgccctactcgggcaacccctacgtctcctcac 352 Query: 282 ccgccgccggcgcggcgcccgcctcgaagaatacaatgggcacggtgaaggacgtcctgg 341 |||||| ||||| ||||||||||| ||||||||||||| ||||||||||| || || | Sbjct: 353 ccgccggcggcgtcgcgcccgcctccaagaatacaatggatacggtgaaggatgttctcg 412 Query: 342 ggaagatggggaagaggtttggcgaggccgcccgcaagacggagaacatcaccggcaact 401 | |||||||||||||||||||| ||||| || ||||||||||||| | |||||||||||| Sbjct: 413 gcaagatggggaagaggtttggagaggcggctcgcaagacggagaccctcaccggcaact 472 Query: 402 tctggcagcacttgaaaactggaccaagcattgctgatgcagcaatgggcaggatctccc 461 ||||||| |||||||||||||||||||||||| | |||||||||||||||||| | |||| Sbjct: 473 tctggcaacacttgaaaactggaccaagcattacagatgcagcaatgggcagggtttccc 532 Query: 462 agatcaccaaagtcatcgcagaaggtggatatgataaaatttttcatcaaacatttgatg 521 |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 533 agatcaccaaagtcatagcagaaggtggatatgataaaatcttccatcaaacatttgatg 592 Query: 522 tcctccctgatgaaaaacttaagaagccatatgcgtgttatctgtcaacctctgctggtc 581 |||||||||| || ||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 593 tcctccctgacgagaaactgaagaaaccatatgcatgttatctgtcaacctctgctggtc 652 Query: 582 ctgttatgggtgtgctctacctgtccaatgtgaagctggcattctgtagcgataatccac 641 |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 653 ctgtcatgggtgtgctatacctgtccaataaaaagctggcattctgtagcgataatccac 712 Query: 642 ttgctcacaaggttggagataaaactgagtggagctattacaaggttgtcattcccctca 701 ||||| ||||||||||||| ||| |||||||||||| || |||||||||||||||| || Sbjct: 713 ttgcttacaaggttggagacaaagatgagtggagctactataaggttgtcattccccaca 772 Query: 702 cccaactgaggtcagttaatccttcgacaagcagaacaaatgcagctgagaaatacgttc 761 |||||||||| ||||| |||||||| || ||||||||||||||| ||||||||||| | | Sbjct: 773 cccaactgagatcagtgaatccttcaacgagcagaacaaatgcatctgagaaatacatcc 832 Query: 762 aggtggtttctgttgacaatcatgagttttggttcatgggcttcgtgtactacgacaatg 821 |||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||| | Sbjct: 833 aggtggtttccgttgataatcatgagttctggttcatgggcttcgtgtactatgacagcg 892 Query: 822 ctgttaagaatctgcaggaagcacttcaggaggctcagaatttactagcccagtgatgt 880 | || |||||||||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 893 ccgtaaagaatctgcaggaagcacttcaggaggctcagaatctacgagcttagtgatgt 951 >dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full insert sequence Length = 1136 Score = 801 bits (404), Expect = 0.0 Identities = 640/719 (89%), Gaps = 6/719 (0%) Strand = Plus / Plus Query: 168 cggagtacgcgccctatccgaggctctcgccagaggacgtggccccgcctccgcctcccc 227 |||| ||||||| ||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 234 cggactacgcgcactacccgaggctctcgccggaggacgtggccccgcccccccctccgt 293 Query: 228 cttaccacgc------ctcctccgcacctcccttctcaggcaacccctacgtctcctccc 281 | |||||||| ||||||||| || |||| ||| |||||||||||||||||||| | Sbjct: 294 cctaccacgctgccgcctcctccgcgccgccctactcgggcaacccctacgtctcctcac 353 Query: 282 ccgccgccggcgcggcgcccgcctcgaagaatacaatgggcacggtgaaggacgtcctgg 341 |||||| ||||| ||||||||||| ||||||||||||| ||||||||||| || || | Sbjct: 354 ccgccggcggcgtcgcgcccgcctccaagaatacaatggatacggtgaaggatgttctcg 413 Query: 342 ggaagatggggaagaggtttggcgaggccgcccgcaagacggagaacatcaccggcaact 401 | |||||||||||||||||||| ||||| || ||||||||||||| | |||||||||||| Sbjct: 414 gcaagatggggaagaggtttggagaggcggctcgcaagacggagaccctcaccggcaact 473 Query: 402 tctggcagcacttgaaaactggaccaagcattgctgatgcagcaatgggcaggatctccc 461 ||||||| |||||||||||||||||||||||| | |||||||||||||||||| | |||| Sbjct: 474 tctggcaacacttgaaaactggaccaagcattacagatgcagcaatgggcagggtttccc 533 Query: 462 agatcaccaaagtcatcgcagaaggtggatatgataaaatttttcatcaaacatttgatg 521 |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 534 agatcaccaaagtcatagcagaaggtggatatgataaaatcttccatcaaacatttgatg 593 Query: 522 tcctccctgatgaaaaacttaagaagccatatgcgtgttatctgtcaacctctgctggtc 581 |||||||||| || ||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 594 tcctccctgacgagaaactgaagaaaccatatgcatgttatctgtcaacctctgctggtc 653 Query: 582 ctgttatgggtgtgctctacctgtccaatgtgaagctggcattctgtagcgataatccac 641 |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 654 ctgtcatgggtgtgctatacctgtccaataaaaagctggcattctgtagcgataatccac 713 Query: 642 ttgctcacaaggttggagataaaactgagtggagctattacaaggttgtcattcccctca 701 ||||| ||||||||||||| ||| |||||||||||| || |||||||||||||||| || Sbjct: 714 ttgcttacaaggttggagacaaagatgagtggagctactataaggttgtcattccccaca 773 Query: 702 cccaactgaggtcagttaatccttcgacaagcagaacaaatgcagctgagaaatacgttc 761 |||||||||| ||||| |||||||| || ||||||||||||||| ||||||||||| | | Sbjct: 774 cccaactgagatcagtgaatccttcaacgagcagaacaaatgcatctgagaaatacatcc 833 Query: 762 aggtggtttctgttgacaatcatgagttttggttcatgggcttcgtgtactacgacaatg 821 |||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||| | Sbjct: 834 aggtggtttccgttgataatcatgagttctggttcatgggcttcgtgtactatgacagcg 893 Query: 822 ctgttaagaatctgcaggaagcacttcaggaggctcagaatttactagcccagtgatgt 880 | || |||||||||||||||||||||||||||||||||||| ||| ||| |||||||| Sbjct: 894 ccgtaaagaatctgcaggaagcacttcaggaggctcagaatctacgagcttagtgatgt 952 >gb|AY108960.1| Zea mays PCO105999 mRNA sequence Length = 1111 Score = 690 bits (348), Expect = 0.0 Identities = 590/668 (88%), Gaps = 2/668 (0%) Strand = Plus / Plus Query: 259 aggcaacccctacgtctcctcccccgccgccggcgcggcgcccgcctcgaagaatacaat 318 ||||||||||||| ||| ||||||||||| |||||| || || || |||||||||| || Sbjct: 268 aggcaacccctacatctactcccccgccggcggcgccgccacctccccgaagaatacgat 327 Query: 319 gggcacggtgaaggacgtcctggggaagatggggaagaggtttggcgaggccgcccgcaa 378 || | | ||||||||||| || || |||||||| ||||||||||||||||| |||||||| Sbjct: 328 ggactccgtgaaggacgtgctcggcaagatgggaaagaggtttggcgaggcggcccgcaa 387 Query: 379 gacggagaacatcaccggcaacttctggcagcacttgaaaactggaccaagcattgctga 438 ||| |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 388 gaccgagaccatcaccggcaatttctggcagcacttgaaaactggaccaagcattactga 447 Query: 439 tgcagcaatgggcaggatctcccagatcaccaaagtcatcgcagaaggtggatatgataa 498 |||||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||| || Sbjct: 448 tgcagcaatgagcaggatctcacaggtcaccaaagtcattgcagaaggtggatatgacaa 507 Query: 499 aatttttcatcaaacatttgatgtcctccctgatgaaaaacttaagaagccatatgcgtg 558 |||||| |||||||| ||||| ||| ||||| |||||| || |||||||||||||| || Sbjct: 508 aattttccatcaaacttttgaggtcgcccctggtgaaaagctcaagaagccatatgcatg 567 Query: 559 ttatctgtcaacctctgctggtcctgttatgggtgtgctctacctgtccaatgtgaagct 618 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 568 ttatctgtcaacctcggctggtcctgttatgggtgtgctttacctgtccaatgtaaaact 627 Query: 619 ggcattctgtagcgataatccacttgctcacaaggttggagataaaactgagtggagcta 678 |||||| ||||| ||||| |||||||| || |||||||||| |||||||||||||| || Sbjct: 628 ggcattttgtagtgataacccacttgcataccaggttggagacaaaactgagtggagtta 687 Query: 679 ttacaaggttgtcattcccctcacccaactgaggtcagttaatccttcgacaagcagaac 738 |||||||| ||||| ||||| | |||||| | ||| ||||| | || ||||||||||| Sbjct: 688 ctacaaggtggtcatcccccttgctcaactgcgatcaattaattcatcaacaagcagaac 747 Query: 739 aaatgcagctgagaaatacgttcaggtggtttctgttgacaatcatgagttttggttcat 798 ||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||| || Sbjct: 748 aaatgcagcagagaaatacattcaggtggtttctgttgataaccatgagttttggtttat 807 Query: 799 gggcttcgtgtactacgacaatgctgttaagaatctgcaggaagcacttcaggaggctca 858 ||||||||| ||||| |||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 808 gggcttcgtttactatgacagtgcggtgaagaatctgcaggaagcacttcaggaggctca 867 Query: 859 gaatttactagcccagtgatgtgtctatatattggaactaacatgtcttatacattacag 918 |||||||| || |||||||| || || |||||||||| ||||||||||||||||||| Sbjct: 868 gaatttacgtgcttagtgatgt-tc-atggattggaactagcatgtcttatacattacag 925 Query: 919 ttgtgata 926 |||||||| Sbjct: 926 ttgtgata 933 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 168 cggagtacgcgccctatccgaggctctcgccagaggacgtggccccgcctccgcctcccc 227 |||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| || | Sbjct: 171 cggagtacgcgcactacccgaggctctcgccagaggaggtggccccgcccccgcccccgc 230 Query: 228 cttaccacgcc 238 |||| |||||| Sbjct: 231 cttatcacgcc 241 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 361 bits (182), Expect = 4e-96 Identities = 251/274 (91%) Strand = Plus / Plus Query: 414 tgaaaactggaccaagcattgctgatgcagcaatgggcaggatctcccagatcaccaaag 473 |||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||| Sbjct: 4575637 tgaaaactggaccaagcattacagatgcagcaatgggcagggtttcccagatcaccaaag 4575696 Query: 474 tcatcgcagaaggtggatatgataaaatttttcatcaaacatttgatgtcctccctgatg 533 |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| | Sbjct: 4575697 tcatagcagaaggtggatatgataaaatcttccatcaaacatttgatgtcctccctgacg 4575756 Query: 534 aaaaacttaagaagccatatgcgtgttatctgtcaacctctgctggtcctgttatgggtg 593 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 4575757 agaaactgaagaaaccatatgcatgttatctgtcaacctctgctggtcctgtcatgggtg 4575816 Query: 594 tgctctacctgtccaatgtgaagctggcattctgtagcgataatccacttgctcacaagg 653 |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 4575817 tgctatacctgtccaataaaaagctggcattctgtagcgataatccacttgcttacaagg 4575876 Query: 654 ttggagataaaactgagtggagctattacaaggt 687 ||||||| ||| |||||||||||| || ||||| Sbjct: 4575877 ttggagacaaagatgagtggagctactataaggt 4575910 Score = 232 bits (117), Expect = 2e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 684 aggttgtcattcccctcacccaactgaggtcagttaatccttcgacaagcagaacaaatg 743 ||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 4576205 aggttgtcattccccacacccaactgagatcagtgaatccttcaacgagcagaacaaatg 4576264 Query: 744 cagctgagaaatacgttcaggtggtttctgttgacaatcatgagttttggttcatgggct 803 || ||||||||||| | ||||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 4576265 catctgagaaatacatccaggtggtttccgttgataatcatgagttctggttcatgggct 4576324 Query: 804 tcgtgtactacgacaatgctgttaagaatctgcaggaagcacttcaggaggctcagaatt 863 |||||||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 4576325 tcgtgtactatgacagcgccgtaaagaatctgcaggaagcacttcaggaggctcagaatc 4576384 Query: 864 tactagcccagtgatgt 880 ||| ||| |||||||| Sbjct: 4576385 tacgagcttagtgatgt 4576401 Score = 109 bits (55), Expect = 2e-20 Identities = 126/150 (84%), Gaps = 6/150 (4%) Strand = Plus / Plus Query: 168 cggagtacgcgccctatccgaggctctcgccagaggacgtggccccgcctccgcctcccc 227 |||| ||||||| ||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 4574508 cggactacgcgcactacccgaggctctcgccggaggacgtggccccgcccccccctccgt 4574567 Query: 228 cttaccacgc------ctcctccgcacctcccttctcaggcaacccctacgtctcctccc 281 | |||||||| ||||||||| || |||| ||| |||||||||||||||||||| | Sbjct: 4574568 cctaccacgctgccgcctcctccgcgccgccctactcgggcaacccctacgtctcctcac 4574627 Query: 282 ccgccgccggcgcggcgcccgcctcgaaga 311 |||||| ||||| ||||||||||| |||| Sbjct: 4574628 ccgccggcggcgtcgcgcccgcctccaaga 4574657 Score = 107 bits (54), Expect = 9e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 312 atacaatgggcacggtgaaggacgtcctggggaagatggggaagaggtttggcgaggccg 371 ||||||||| ||||||||||| || || || |||||||||||||||||||| ||||| | Sbjct: 4574751 atacaatggatacggtgaaggatgttctcggcaagatggggaagaggtttggagaggcgg 4574810 Query: 372 cccgcaagacggagaacatcaccggcaacttctggcagcact 413 | ||||||||||||| | ||||||||||||||||||| |||| Sbjct: 4574811 ctcgcaagacggagaccctcaccggcaacttctggcaacact 4574852 >gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 361 bits (182), Expect = 4e-96 Identities = 251/274 (91%) Strand = Plus / Plus Query: 414 tgaaaactggaccaagcattgctgatgcagcaatgggcaggatctcccagatcaccaaag 473 |||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||| Sbjct: 16477 tgaaaactggaccaagcattacagatgcagcaatgggcagggtttcccagatcaccaaag 16536 Query: 474 tcatcgcagaaggtggatatgataaaatttttcatcaaacatttgatgtcctccctgatg 533 |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| | Sbjct: 16537 tcatagcagaaggtggatatgataaaatcttccatcaaacatttgatgtcctccctgacg 16596 Query: 534 aaaaacttaagaagccatatgcgtgttatctgtcaacctctgctggtcctgttatgggtg 593 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 16597 agaaactgaagaaaccatatgcatgttatctgtcaacctctgctggtcctgtcatgggtg 16656 Query: 594 tgctctacctgtccaatgtgaagctggcattctgtagcgataatccacttgctcacaagg 653 |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 16657 tgctatacctgtccaataaaaagctggcattctgtagcgataatccacttgcttacaagg 16716 Query: 654 ttggagataaaactgagtggagctattacaaggt 687 ||||||| ||| |||||||||||| || ||||| Sbjct: 16717 ttggagacaaagatgagtggagctactataaggt 16750 Score = 232 bits (117), Expect = 2e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 684 aggttgtcattcccctcacccaactgaggtcagttaatccttcgacaagcagaacaaatg 743 ||||||||||||||| |||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 17045 aggttgtcattccccacacccaactgagatcagtgaatccttcaacgagcagaacaaatg 17104 Query: 744 cagctgagaaatacgttcaggtggtttctgttgacaatcatgagttttggttcatgggct 803 || ||||||||||| | ||||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 17105 catctgagaaatacatccaggtggtttccgttgataatcatgagttctggttcatgggct 17164 Query: 804 tcgtgtactacgacaatgctgttaagaatctgcaggaagcacttcaggaggctcagaatt 863 |||||||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 17165 tcgtgtactatgacagcgccgtaaagaatctgcaggaagcacttcaggaggctcagaatc 17224 Query: 864 tactagcccagtgatgt 880 ||| ||| |||||||| Sbjct: 17225 tacgagcttagtgatgt 17241 Score = 109 bits (55), Expect = 2e-20 Identities = 126/150 (84%), Gaps = 6/150 (4%) Strand = Plus / Plus Query: 168 cggagtacgcgccctatccgaggctctcgccagaggacgtggccccgcctccgcctcccc 227 |||| ||||||| ||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 15348 cggactacgcgcactacccgaggctctcgccggaggacgtggccccgcccccccctccgt 15407 Query: 228 cttaccacgc------ctcctccgcacctcccttctcaggcaacccctacgtctcctccc 281 | |||||||| ||||||||| || |||| ||| |||||||||||||||||||| | Sbjct: 15408 cctaccacgctgccgcctcctccgcgccgccctactcgggcaacccctacgtctcctcac 15467 Query: 282 ccgccgccggcgcggcgcccgcctcgaaga 311 |||||| ||||| ||||||||||| |||| Sbjct: 15468 ccgccggcggcgtcgcgcccgcctccaaga 15497 Score = 107 bits (54), Expect = 9e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 312 atacaatgggcacggtgaaggacgtcctggggaagatggggaagaggtttggcgaggccg 371 ||||||||| ||||||||||| || || || |||||||||||||||||||| ||||| | Sbjct: 15591 atacaatggatacggtgaaggatgttctcggcaagatggggaagaggtttggagaggcgg 15650 Query: 372 cccgcaagacggagaacatcaccggcaacttctggcagcact 413 | ||||||||||||| | ||||||||||||||||||| |||| Sbjct: 15651 ctcgcaagacggagaccctcaccggcaacttctggcaacact 15692