BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf054a13 (1149 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052321.1| Oryza sativa (japonica cultivar-group) Os02g... 733 0.0 dbj|AK102856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 733 0.0 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 307 5e-80 dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 307 5e-80 >ref|NM_001052321.1| Oryza sativa (japonica cultivar-group) Os02g0130900 (Os02g0130900) mRNA, partial cds Length = 2165 Score = 733 bits (370), Expect = 0.0 Identities = 594/668 (88%), Gaps = 3/668 (0%) Strand = Plus / Plus Query: 6 ttggacaaccaaagagattacaaattaacaaaaagtatttctcttggtagtagctttatt 65 ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 1129 ttggacacccaaagagattacaaattaacaaaaagtatatctcttggttgtagcttcatt 1188 Query: 66 gttaaagcatctaaccttctgaatgatcttgactgggtcgaacttctatgtgctcattgc 125 || ||||||||||||||| | |||||| |||| ||| | ||||||||||||||||||||| Sbjct: 1189 gtgaaagcatctaaccttgtaaatgatgttgaatggcttgaacttctatgtgctcattgc 1248 Query: 126 tcgtcacctcttgggtcatacccttcgcaatgttcacatgctccagcggatggccggata 185 || |||||| |||||||||||||||| ||| ||||||||||||||| |||||||| || Sbjct: 1249 tcatcacctattgggtcatacccttcacaacattcacatgctccagcagatggccgtgta 1308 Query: 186 cgactatttaagtgctacacatcctcagaccttcctgttgggggtccttgtgatgtgttc 245 ||||||||||| ||||| |||| |||||||||| ||||||||| ||| |||||||||| Sbjct: 1309 cgactatttaaatgctatgcatcgtcagaccttcatgttgggggacctcatgatgtgttc 1368 Query: 246 aggggacatacattggaaagactttttgttaatttgttgcttgaaattgctgaagatgaa 305 ||||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1369 agggggcatacattagaaagactttttgttaatttgttgcttgaagttgcagaagatgaa 1428 Query: 306 atttctttccgcacagtagtcagagatttgaaaaccaaaaggccaatcctgcaaatagtc 365 || ||||| || ||| ||||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1429 atatcttttcgtacattagtcagagatctgaaaaccaaaaggcccatccttcaaatagtc 1488 Query: 366 cttcttacttcaaaagcatggttgttttctggctactgctatgaaaatgatatggatggt 425 || |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1489 ctccttagttcaaaagcgtggctgttttctggctactgctatgaaaatgatatggatggt 1548 Query: 426 tcacatgggacagcagcacatctgcagcctgctgttaaactcttgtattctaattgcagc 485 ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1549 tcacatggg---gcagcacatctgcagccctctgttaagatcttgtattctaattgcagt 1605 Query: 486 aatgcctcagaagcagacttaaggacagtagaggagtggtcctccaaatatcgggctgaa 545 ||||| | |||| ||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 1606 aatgctttggaagaagacttaaggacagtagaggagtggtcatccaaatatagggctgaa 1665 Query: 546 gagttgtacatgatggggcgtcaaatagatgaacttattgaatgcctcagctcagctatg 605 ||||||||||||||| |||||||||||||||| |||||| | |||||| |||||||| | Sbjct: 1666 gagttgtacatgatgaggcgtcaaatagatgagcttattctaagcctcaactcagctagg 1725 Query: 606 gataagtttccactttcttgctcttctcttgaaggaatgtatctatcatctctggagcgc 665 ||||| |||||||||||||||||||| || | |||||||| || ||||| || ||||| Sbjct: 1726 gataattttccactttcttgctcttccctccagggaatgtacctctcatccctagagcgt 1785 Query: 666 tgagttga 673 ||| |||| Sbjct: 1786 tgacttga 1793 >dbj|AK102856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110M10, full insert sequence Length = 2166 Score = 733 bits (370), Expect = 0.0 Identities = 594/668 (88%), Gaps = 3/668 (0%) Strand = Plus / Plus Query: 6 ttggacaaccaaagagattacaaattaacaaaaagtatttctcttggtagtagctttatt 65 ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 1130 ttggacacccaaagagattacaaattaacaaaaagtatatctcttggttgtagcttcatt 1189 Query: 66 gttaaagcatctaaccttctgaatgatcttgactgggtcgaacttctatgtgctcattgc 125 || ||||||||||||||| | |||||| |||| ||| | ||||||||||||||||||||| Sbjct: 1190 gtgaaagcatctaaccttgtaaatgatgttgaatggcttgaacttctatgtgctcattgc 1249 Query: 126 tcgtcacctcttgggtcatacccttcgcaatgttcacatgctccagcggatggccggata 185 || |||||| |||||||||||||||| ||| ||||||||||||||| |||||||| || Sbjct: 1250 tcatcacctattgggtcatacccttcacaacattcacatgctccagcagatggccgtgta 1309 Query: 186 cgactatttaagtgctacacatcctcagaccttcctgttgggggtccttgtgatgtgttc 245 ||||||||||| ||||| |||| |||||||||| ||||||||| ||| |||||||||| Sbjct: 1310 cgactatttaaatgctatgcatcgtcagaccttcatgttgggggacctcatgatgtgttc 1369 Query: 246 aggggacatacattggaaagactttttgttaatttgttgcttgaaattgctgaagatgaa 305 ||||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1370 agggggcatacattagaaagactttttgttaatttgttgcttgaagttgcagaagatgaa 1429 Query: 306 atttctttccgcacagtagtcagagatttgaaaaccaaaaggccaatcctgcaaatagtc 365 || ||||| || ||| ||||||||||| |||||||||||||||| ||||| ||||||||| Sbjct: 1430 atatcttttcgtacattagtcagagatctgaaaaccaaaaggcccatccttcaaatagtc 1489 Query: 366 cttcttacttcaaaagcatggttgttttctggctactgctatgaaaatgatatggatggt 425 || |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1490 ctccttagttcaaaagcgtggctgttttctggctactgctatgaaaatgatatggatggt 1549 Query: 426 tcacatgggacagcagcacatctgcagcctgctgttaaactcttgtattctaattgcagc 485 ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1550 tcacatggg---gcagcacatctgcagccctctgttaagatcttgtattctaattgcagt 1606 Query: 486 aatgcctcagaagcagacttaaggacagtagaggagtggtcctccaaatatcgggctgaa 545 ||||| | |||| ||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 1607 aatgctttggaagaagacttaaggacagtagaggagtggtcatccaaatatagggctgaa 1666 Query: 546 gagttgtacatgatggggcgtcaaatagatgaacttattgaatgcctcagctcagctatg 605 ||||||||||||||| |||||||||||||||| |||||| | |||||| |||||||| | Sbjct: 1667 gagttgtacatgatgaggcgtcaaatagatgagcttattctaagcctcaactcagctagg 1726 Query: 606 gataagtttccactttcttgctcttctcttgaaggaatgtatctatcatctctggagcgc 665 ||||| |||||||||||||||||||| || | |||||||| || ||||| || ||||| Sbjct: 1727 gataattttccactttcttgctcttccctccagggaatgtacctctcatccctagagcgt 1786 Query: 666 tgagttga 673 ||| |||| Sbjct: 1787 tgacttga 1794 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 307 bits (155), Expect = 5e-80 Identities = 238/265 (89%), Gaps = 3/265 (1%) Strand = Plus / Plus Query: 245 caggggacatacattggaaagactttttgttaatttgttgcttgaaattgctgaagatga 304 |||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 1606016 cagggggcatacattagaaagactttttgttaatttgttgcttgaagttgcagaagatga 1606075 Query: 305 aatttctttccgcacagtagtcagagatttgaaaaccaaaaggccaatcctgcaaatagt 364 ||| ||||| || ||| ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1606076 aatatcttttcgtacattagtcagagatctgaaaaccaaaaggcccatccttcaaatagt 1606135 Query: 365 ccttcttacttcaaaagcatggttgttttctggctactgctatgaaaatgatatggatgg 424 ||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1606136 cctccttagttcaaaagcgtggctgttttctggctactgctatgaaaatgatatggatgg 1606195 Query: 425 ttcacatgggacagcagcacatctgcagcctgctgttaaactcttgtattctaattgcag 484 |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1606196 ttcacatggg---gcagcacatctgcagccctctgttaagatcttgtattctaattgcag 1606252 Query: 485 caatgcctcagaagcagacttaagg 509 ||||| | |||| |||||||||| Sbjct: 1606253 taatgctttggaagaagacttaagg 1606277 Score = 268 bits (135), Expect = 5e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 6 ttggacaaccaaagagattacaaattaacaaaaagtatttctcttggtagtagctttatt 65 ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 1605621 ttggacacccaaagagattacaaattaacaaaaagtatatctcttggttgtagcttcatt 1605680 Query: 66 gttaaagcatctaaccttctgaatgatcttgactgggtcgaacttctatgtgctcattgc 125 || ||||||||||||||| | |||||| |||| ||| | ||||||||||||||||||||| Sbjct: 1605681 gtgaaagcatctaaccttgtaaatgatgttgaatggcttgaacttctatgtgctcattgc 1605740 Query: 126 tcgtcacctcttgggtcatacccttcgcaatgttcacatgctccagcggatggccggata 185 || |||||| |||||||||||||||| ||| ||||||||||||||| |||||||| || Sbjct: 1605741 tcatcacctattgggtcatacccttcacaacattcacatgctccagcagatggccgtgta 1605800 Query: 186 cgactatttaagtgctacacatcctcagaccttcctgttgggggtccttgtgatgtgttc 245 ||||||||||| ||||| |||| |||||||||| ||||||||| ||| |||||||||| Sbjct: 1605801 cgactatttaaatgctatgcatcgtcagaccttcatgttgggggacctcatgatgtgttc 1605860 Query: 246 agg 248 ||| Sbjct: 1605861 agg 1605863 Score = 172 bits (87), Expect = 2e-39 Identities = 147/167 (88%) Strand = Plus / Plus Query: 507 aggacagtagaggagtggtcctccaaatatcgggctgaagagttgtacatgatggggcgt 566 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1606673 aggacagtagaggagtggtcatccaaatatagggctgaagagttgtacatgatgaggcgt 1606732 Query: 567 caaatagatgaacttattgaatgcctcagctcagctatggataagtttccactttcttgc 626 ||||||||||| |||||| | |||||| |||||||| |||||| ||||||||||||||| Sbjct: 1606733 caaatagatgagcttattctaagcctcaactcagctagggataattttccactttcttgc 1606792 Query: 627 tcttctcttgaaggaatgtatctatcatctctggagcgctgagttga 673 ||||| || | |||||||| || ||||| || ||||| ||| |||| Sbjct: 1606793 tcttccctccagggaatgtacctctcatccctagagcgttgacttga 1606839 Score = 105 bits (53), Expect = 4e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 514 tagaggagtggtcctccaaatatcgggctgaagagttgtacatgatggggcgtcaaatag 573 |||||||||| || ||||||| | ||||||||||||||||||||||| ||| ||||||| Sbjct: 1668059 tagaggagtgatcatccaaatgtagggctgaagagttgtacatgatgaggcaccaaatag 1668000 Query: 574 atgaacttattgaatgcctcagctcagctatggataagtttccactttcttgctcttctc 633 ||||| |||||| | |||| ||||||| || |||||| ||||||||| ||||| ||||| Sbjct: 1667999 atgaatttattggaagcctaagctcaggtagggataaagttccactttgttgcttttctc 1667940 Query: 634 t 634 | Sbjct: 1667939 t 1667939 >dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 307 bits (155), Expect = 5e-80 Identities = 238/265 (89%), Gaps = 3/265 (1%) Strand = Plus / Plus Query: 245 caggggacatacattggaaagactttttgttaatttgttgcttgaaattgctgaagatga 304 |||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 43119 cagggggcatacattagaaagactttttgttaatttgttgcttgaagttgcagaagatga 43178 Query: 305 aatttctttccgcacagtagtcagagatttgaaaaccaaaaggccaatcctgcaaatagt 364 ||| ||||| || ||| ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 43179 aatatcttttcgtacattagtcagagatctgaaaaccaaaaggcccatccttcaaatagt 43238 Query: 365 ccttcttacttcaaaagcatggttgttttctggctactgctatgaaaatgatatggatgg 424 ||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 43239 cctccttagttcaaaagcgtggctgttttctggctactgctatgaaaatgatatggatgg 43298 Query: 425 ttcacatgggacagcagcacatctgcagcctgctgttaaactcttgtattctaattgcag 484 |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 43299 ttcacatggg---gcagcacatctgcagccctctgttaagatcttgtattctaattgcag 43355 Query: 485 caatgcctcagaagcagacttaagg 509 ||||| | |||| |||||||||| Sbjct: 43356 taatgctttggaagaagacttaagg 43380 Score = 268 bits (135), Expect = 5e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 6 ttggacaaccaaagagattacaaattaacaaaaagtatttctcttggtagtagctttatt 65 ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| Sbjct: 42724 ttggacacccaaagagattacaaattaacaaaaagtatatctcttggttgtagcttcatt 42783 Query: 66 gttaaagcatctaaccttctgaatgatcttgactgggtcgaacttctatgtgctcattgc 125 || ||||||||||||||| | |||||| |||| ||| | ||||||||||||||||||||| Sbjct: 42784 gtgaaagcatctaaccttgtaaatgatgttgaatggcttgaacttctatgtgctcattgc 42843 Query: 126 tcgtcacctcttgggtcatacccttcgcaatgttcacatgctccagcggatggccggata 185 || |||||| |||||||||||||||| ||| ||||||||||||||| |||||||| || Sbjct: 42844 tcatcacctattgggtcatacccttcacaacattcacatgctccagcagatggccgtgta 42903 Query: 186 cgactatttaagtgctacacatcctcagaccttcctgttgggggtccttgtgatgtgttc 245 ||||||||||| ||||| |||| |||||||||| ||||||||| ||| |||||||||| Sbjct: 42904 cgactatttaaatgctatgcatcgtcagaccttcatgttgggggacctcatgatgtgttc 42963 Query: 246 agg 248 ||| Sbjct: 42964 agg 42966 Score = 172 bits (87), Expect = 2e-39 Identities = 147/167 (88%) Strand = Plus / Plus Query: 507 aggacagtagaggagtggtcctccaaatatcgggctgaagagttgtacatgatggggcgt 566 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 43776 aggacagtagaggagtggtcatccaaatatagggctgaagagttgtacatgatgaggcgt 43835 Query: 567 caaatagatgaacttattgaatgcctcagctcagctatggataagtttccactttcttgc 626 ||||||||||| |||||| | |||||| |||||||| |||||| ||||||||||||||| Sbjct: 43836 caaatagatgagcttattctaagcctcaactcagctagggataattttccactttcttgc 43895 Query: 627 tcttctcttgaaggaatgtatctatcatctctggagcgctgagttga 673 ||||| || | |||||||| || ||||| || ||||| ||| |||| Sbjct: 43896 tcttccctccagggaatgtacctctcatccctagagcgttgacttga 43942 Score = 105 bits (53), Expect = 4e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 514 tagaggagtggtcctccaaatatcgggctgaagagttgtacatgatggggcgtcaaatag 573 |||||||||| || ||||||| | ||||||||||||||||||||||| ||| ||||||| Sbjct: 105162 tagaggagtgatcatccaaatgtagggctgaagagttgtacatgatgaggcaccaaatag 105103 Query: 574 atgaacttattgaatgcctcagctcagctatggataagtttccactttcttgctcttctc 633 ||||| |||||| | |||| ||||||| || |||||| ||||||||| ||||| ||||| Sbjct: 105102 atgaatttattggaagcctaagctcaggtagggataaagttccactttgttgcttttctc 105043 Query: 634 t 634 | Sbjct: 105042 t 105042