BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf053a03 (1117 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063317.1| Oryza sativa (japonica cultivar-group) Os06g... 496 e-136 dbj|AK067250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-136 gb|EF059989.1| Brachypodium sylvaticum hypothetical protein (57h... 266 2e-67 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 246 2e-61 dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic D... 246 2e-61 >ref|NM_001063317.1| Oryza sativa (japonica cultivar-group) Os06g0144600 (Os06g0144600) mRNA, partial cds Length = 2583 Score = 496 bits (250), Expect = e-136 Identities = 280/290 (96%) Strand = Plus / Plus Query: 234 agcaaacagtattatggatgtcctgatgataagacattccggtacatggcgtcagtgtat 293 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 826 agcaaacagtattatggatgtcctgatgataagacattccggtacatggcatcagtttat 885 Query: 294 agtcaatcacactataacatgtctttgagcaaagaatttaaaggagggattacaaatgga 353 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 agtcaatcgcactataacatgtctttgagcaaagaatttaaaggagggattacaaatgga 945 Query: 354 gcattctggtatccaatctatggtggcatgcaagactggaactatatacatggaggctgc 413 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 946 gcattctggtatccaatctatggtgggatgcaagactggaactatatacatggaggttgc 1005 Query: 414 tttgagttaacccttgaaattagtgacgtaaaatggccaaaagcagctgagcttcctgtc 473 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1006 tttgagttaaccctggaaattagtgacgtaaaatggccaaaggcagctgagcttcctgtc 1065 Query: 474 atatgggaacaaaataggatgagtatgctcaatcttgttgcaagccttgt 523 ||||||||||| ||||||||||||||||| ||||||| |||||||||||| Sbjct: 1066 atatgggaacagaataggatgagtatgcttaatcttgctgcaagccttgt 1115 Score = 208 bits (105), Expect = 4e-50 Identities = 216/253 (85%) Strand = Plus / Plus Query: 526 agacaggagttcatggaaggatatttgcggcagatactggccatcctatacctggctcac 585 |||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| | Sbjct: 2011 agacgggagttcatggaaggatatttgcggcagatacaggtcatcctataccaggctccc 2070 Query: 586 tgatgataaagggaattgattccaagataagtgctagcaggacatatggtgattaccatc 645 ||| ||||||||| || | ||| ||||||| ||||||||||| ||||| |||||||||| Sbjct: 2071 tgacgataaagggtatcggttctgagataagggctagcaggacttatggcgattaccatc 2130 Query: 646 gaatgcttgctcctggtgagagctacgaagtcgtggcatcaatggaaggcttcaggcgaa 705 |||||||||| |||||||||| ||| |||||| ||||||| ||||| |||||| | || Sbjct: 2131 gaatgcttgcacctggtgagaactatgaagtcatggcatctatggagggcttccgaacaa 2190 Query: 706 aaggtacacgtattgtgctggaggaggaagccgtgaatctggatttcatcttggatccag 765 ||| ||||||||||||| |||||||| | || |||| |||| |||||||| |||| || Sbjct: 2191 aagctacacgtattgtggtggaggagaaggctgtgagcttggacttcatcttagatcgag 2250 Query: 766 acggagcttatgg 778 | |||||| |||| Sbjct: 2251 atggagctaatgg 2263 >dbj|AK067250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L05, full insert sequence Length = 2586 Score = 496 bits (250), Expect = e-136 Identities = 280/290 (96%) Strand = Plus / Plus Query: 234 agcaaacagtattatggatgtcctgatgataagacattccggtacatggcgtcagtgtat 293 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 828 agcaaacagtattatggatgtcctgatgataagacattccggtacatggcatcagtttat 887 Query: 294 agtcaatcacactataacatgtctttgagcaaagaatttaaaggagggattacaaatgga 353 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 agtcaatcgcactataacatgtctttgagcaaagaatttaaaggagggattacaaatgga 947 Query: 354 gcattctggtatccaatctatggtggcatgcaagactggaactatatacatggaggctgc 413 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 948 gcattctggtatccaatctatggtgggatgcaagactggaactatatacatggaggttgc 1007 Query: 414 tttgagttaacccttgaaattagtgacgtaaaatggccaaaagcagctgagcttcctgtc 473 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1008 tttgagttaaccctggaaattagtgacgtaaaatggccaaaggcagctgagcttcctgtc 1067 Query: 474 atatgggaacaaaataggatgagtatgctcaatcttgttgcaagccttgt 523 ||||||||||| ||||||||||||||||| ||||||| |||||||||||| Sbjct: 1068 atatgggaacagaataggatgagtatgcttaatcttgctgcaagccttgt 1117 Score = 208 bits (105), Expect = 4e-50 Identities = 216/253 (85%) Strand = Plus / Plus Query: 526 agacaggagttcatggaaggatatttgcggcagatactggccatcctatacctggctcac 585 |||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| | Sbjct: 2013 agacgggagttcatggaaggatatttgcggcagatacaggtcatcctataccaggctccc 2072 Query: 586 tgatgataaagggaattgattccaagataagtgctagcaggacatatggtgattaccatc 645 ||| ||||||||| || | ||| ||||||| ||||||||||| ||||| |||||||||| Sbjct: 2073 tgacgataaagggtatcggttctgagataagggctagcaggacttatggcgattaccatc 2132 Query: 646 gaatgcttgctcctggtgagagctacgaagtcgtggcatcaatggaaggcttcaggcgaa 705 |||||||||| |||||||||| ||| |||||| ||||||| ||||| |||||| | || Sbjct: 2133 gaatgcttgcacctggtgagaactatgaagtcatggcatctatggagggcttccgaacaa 2192 Query: 706 aaggtacacgtattgtgctggaggaggaagccgtgaatctggatttcatcttggatccag 765 ||| ||||||||||||| |||||||| | || |||| |||| |||||||| |||| || Sbjct: 2193 aagctacacgtattgtggtggaggagaaggctgtgagcttggacttcatcttagatcgag 2252 Query: 766 acggagcttatgg 778 | |||||| |||| Sbjct: 2253 atggagctaatgg 2265 >gb|EF059989.1| Brachypodium sylvaticum hypothetical protein (57h21.1), methyl sulfoxide reductase (57h21.2), hypothetical protein (57h21.3), oxidoreductase (57h21.4), auxin efflux carrier (57h21.6), CCR4 associated factor-like protein (57h21.7), ribosomal subunit 8E protein (57h21.8), expressed protein (57h21.9), expressed protein (57h21.10), acid phosphatase (57h21.11), polygalacturonase inhibitor (57h21.12), proteasome (57h21.13), leucine carboxyl methyl transferase (57h21.14), homeobox (57h21.15), serine threonine kinase (57h21.16), hypothetical protein (57h21.17), GFP binding protein (57h21.18), zinc carboxy peptidase (57h21.20), DNA repair protein (57h21.21), coatomer complex subunit (57h21.22), sulfate transporter (57h21.23), hypothetical protein (57h21.24), hypothetical protein (57h21.25), hypothetical protein (57h21.26), acyl-ATP thioesterase (57h21.27), hypothetical protein (57h21.28), hypothetical protein (57h21.29), superoxide dismutase (57h21.30), expressed protein (57h21.31), protein kinase (57h21.32), early nodulin protein (57h21.33), early nodulin protein (57h21.34), hypothetical protein (57h21.36), hypothetical protein (57h21.37), and expressed protein (57h21.38) genes, complete cds Length = 371374 Score = 266 bits (134), Expect = 2e-67 Identities = 200/222 (90%) Strand = Plus / Plus Query: 143 ctgtttttcattcatctccagtctttaggaccacaattttaattgcttggtttcatcctt 202 |||||| ||||||| ||| || ||||||||||||||||||| ||||||||||||| ||| Sbjct: 123277 ctgtttatcattcacctctagcctttaggaccacaattttacttgcttggtttcagactt 123336 Query: 203 tagcattctcagcaaagattgtcctgcttgcagcaaacagtattatggatgtcctgatga 262 |||||||||| || |||||| | ||||| ||||||||||||||||||||| |||||||| Sbjct: 123337 cagcattctcaacatagattgccttgcttacagcaaacagtattatggatgccctgatga 123396 Query: 263 taagacattccggtacatggcgtcagtgtatagtcaatcacactataacatgtctttgag 322 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 123397 caagacattccggtacatggcatcagtgtatagtcagtcacactataacatgtctttgag 123456 Query: 323 caaagaatttaaaggagggattacaaatggagcattctggta 364 ||||||||| |||||||| ||||| || |||||| ||||||| Sbjct: 123457 caaagaattcaaaggaggtattactaacggagcactctggta 123498 Score = 174 bits (88), Expect = 5e-40 Identities = 100/104 (96%) Strand = Plus / Plus Query: 361 ggtatccaatctatggtggcatgcaagactggaactatatacatggaggctgctttgagt 420 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123642 ggtatccaatctatggtggcatgcaagactggaattatatacatggaggctgctttgagt 123701 Query: 421 taacccttgaaattagtgacgtaaaatggccaaaagcagctgag 464 ||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 123702 taacccttgaaattagtgatctaaaatggccaaaagcatctgag 123745 Score = 113 bits (57), Expect = 2e-21 Identities = 63/65 (96%) Strand = Plus / Plus Query: 463 agcttcctgtcatatgggaacaaaataggatgagtatgctcaatcttgttgcaagccttg 522 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123840 agcttcttgtcatatgggaacaaaataagatgagtatgctcaatcttgttgcaagccttg 123899 Query: 523 taaag 527 ||||| Sbjct: 123900 taaag 123904 Score = 99.6 bits (50), Expect = 2e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 526 agacaggagttcatggaaggatatttgcggcagatactggccatcctatacctggctcac 585 |||||||||||||||||||||||||| | |||||| ||||| |||||||||||| |||| Sbjct: 124905 agacaggagttcatggaaggatattttcttcagatagtggccgtcctatacctggttcac 124964 Query: 586 tgatgataaagggaattgattc 607 ||||| | |||||||||||||| Sbjct: 124965 tgatggtgaagggaattgattc 124986 Score = 95.6 bits (48), Expect = 4e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 678 gtggcatcaatggaaggcttcaggcgaaaaggtacacgtattgtgctggaggaggaagcc 737 |||||||| |||||||||||||||| || | ||| || |||||||||||| |||||||| Sbjct: 125470 gtggcatctatggaaggcttcaggccaagatctactcgcattgtgctggagcaggaagcc 125529 Query: 738 gtgaatctggatttcatcttggatccagacgg 769 ||||||| |||||||||||||| |||||||| Sbjct: 125530 atgaatcttgatttcatcttggacccagacgg 125561 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 246 bits (124), Expect = 2e-61 Identities = 152/160 (95%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 206 cattctcagcaaagattgtcctgcttgcagcaaacagtattatggatgtcctgatgataa 265 |||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 2359829 cattctca-caaggattgtcattcttacagcaaacagtattatggatgtcctgatgataa 2359771 Query: 266 gacattccggtacatggcgtcagtgtatagtcaatcacactataacatgtctttgagcaa 325 |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 2359770 gacattccggtacatggcatcagtttatagtcaatcgcactataacatgtctttgagcaa 2359711 Query: 326 agaatttaaaggagggattacaaatggagcattctggtat 365 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2359710 agaatttaaaggagggattacaaatggagcattctggtat 2359671 Score = 174 bits (88), Expect = 5e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 361 ggtatccaatctatggtggcatgcaagactggaactatatacatggaggctgctttgagt 420 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 2359562 ggtatccaatctatggtgggatgcaagactggaactatatacatggaggttgctttgagt 2359503 Query: 421 taacccttgaaattagtgacgtaaaatggccaaaagcagctgag 464 ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 2359502 taaccctggaaattagtgacgtaaaatggccaaaggcagctgag 2359459 Score = 97.6 bits (49), Expect = 9e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 526 agacaggagttcatggaaggatatttgcggcagatactggccatcctatacctggctcac 585 |||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| | Sbjct: 2358406 agacgggagttcatggaaggatatttgcggcagatacaggtcatcctataccaggctccc 2358347 Query: 586 tgatgataaaggg 598 ||| ||||||||| Sbjct: 2358346 tgacgataaaggg 2358334 Score = 97.6 bits (49), Expect = 9e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 463 agcttcctgtcatatgggaacaaaataggatgagtatgctcaatcttgttgcaagccttg 522 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 2359362 agcttcctgtcatatgggaacagaataggatgagtatgcttaatcttgctgcaagccttg 2359303 Query: 523 t 523 | Sbjct: 2359302 t 2359302 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 610 agataagtgctagcaggacatatggtgattaccatcgaatgcttgctcctggtgagagct 669 ||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||| || Sbjct: 2358107 agataagggctagcaggacttatggcgattaccatcgaatgcttgcacctggtgagaact 2358048 Query: 670 acgaag 675 | |||| Sbjct: 2358047 atgaag 2358042 >dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 246 bits (124), Expect = 2e-61 Identities = 152/160 (95%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 206 cattctcagcaaagattgtcctgcttgcagcaaacagtattatggatgtcctgatgataa 265 |||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct: 81630 cattctca-caaggattgtcattcttacagcaaacagtattatggatgtcctgatgataa 81572 Query: 266 gacattccggtacatggcgtcagtgtatagtcaatcacactataacatgtctttgagcaa 325 |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 81571 gacattccggtacatggcatcagtttatagtcaatcgcactataacatgtctttgagcaa 81512 Query: 326 agaatttaaaggagggattacaaatggagcattctggtat 365 |||||||||||||||||||||||||||||||||||||||| Sbjct: 81511 agaatttaaaggagggattacaaatggagcattctggtat 81472 Score = 174 bits (88), Expect = 5e-40 Identities = 100/104 (96%) Strand = Plus / Minus Query: 361 ggtatccaatctatggtggcatgcaagactggaactatatacatggaggctgctttgagt 420 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 81363 ggtatccaatctatggtgggatgcaagactggaactatatacatggaggttgctttgagt 81304 Query: 421 taacccttgaaattagtgacgtaaaatggccaaaagcagctgag 464 ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 81303 taaccctggaaattagtgacgtaaaatggccaaaggcagctgag 81260 Score = 97.6 bits (49), Expect = 9e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 526 agacaggagttcatggaaggatatttgcggcagatactggccatcctatacctggctcac 585 |||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| | Sbjct: 80207 agacgggagttcatggaaggatatttgcggcagatacaggtcatcctataccaggctccc 80148 Query: 586 tgatgataaaggg 598 ||| ||||||||| Sbjct: 80147 tgacgataaaggg 80135 Score = 97.6 bits (49), Expect = 9e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 463 agcttcctgtcatatgggaacaaaataggatgagtatgctcaatcttgttgcaagccttg 522 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 81163 agcttcctgtcatatgggaacagaataggatgagtatgcttaatcttgctgcaagccttg 81104 Query: 523 t 523 | Sbjct: 81103 t 81103 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 610 agataagtgctagcaggacatatggtgattaccatcgaatgcttgctcctggtgagagct 669 ||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||| || Sbjct: 79908 agataagggctagcaggacttatggcgattaccatcgaatgcttgcacctggtgagaact 79849 Query: 670 acgaag 675 | |||| Sbjct: 79848 atgaag 79843