BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf051c13 (1710 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059416.1| Oryza sativa (japonica cultivar-group) Os04g... 1542 0.0 dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 1542 0.0 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 280 2e-71 emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 280 2e-71 tpd|BR000311.1| TPA_inf: Oryza sativa (japonica cultivar-group) ... 248 6e-62 >ref|NM_001059416.1| Oryza sativa (japonica cultivar-group) Os04g0442200 (Os04g0442200) mRNA, complete cds Length = 1730 Score = 1542 bits (778), Expect = 0.0 Identities = 1260/1421 (88%), Gaps = 6/1421 (0%) Strand = Plus / Plus Query: 174 gttaaaggttactgcactttttgggtggattaggggagatacgagaacacgtgaattaat 233 |||||||||||||||| ||||||||||||||| |||||| || |||||||||||||| | Sbjct: 216 gttaaaggttactgcaatttttgggtggattaagggagacacaagaacacgtgaattgaa 275 Query: 234 cccttcggctgaatcatacacgctcacagggtcagcctcagaggcagacatgaagccacg 293 ||| || ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 276 cccatctgctgaatcatatacgcttacagggtcagcctcagaggcagacaccaagccacg 335 Query: 294 tgaggtatctatttctgttgtttcttctatcatggacattcctccagcggattgggatgc 353 |||||| ||| || |||||||||||||||| |||||||||||| |||| ||||||||||| Sbjct: 336 tgaggtttctgttgctgttgtttcttctattatggacattccttcagcagattgggatgc 395 Query: 354 atgtgctattgattcagctgatcctgaaaagttcaatccttttcttacccacgcgttcct 413 ||||| ||||||||| ||||||||| || || ||||||||||| |||||||| ||||| Sbjct: 396 ctgtgcagttgattcagttgatcctgacaattttaatccttttctgacccacgcattcct 455 Query: 414 ctcaagcttagaagaatcaggttctgcagtgaaggaaacggggtggttacctctgcatgt 473 |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 456 ctcaagcttagaggaatcgggttctgcagtgaaggaaacagggtggttacctctgcatgt 515 Query: 474 tgttgcacgggacgagaatgaaaatattataggtgttgttccactttaccttaaaagcca 533 |||||||||||| |||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 516 tgttgcacgggatgagaatgaaactgtcgttggtgttgtcccactttacctgaaaagcca 575 Query: 534 ttctaggggagagtttgtattcgatcattcatgggcagaagcttactacagttacggact 593 ||| ||||||||||||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct: 576 ttcaaggggagagtttgtatttgatcaatcatgggcagaagcttactatagctatggact 635 Query: 594 tgaatactatccaaagttacagtcttgtgtgccttttactccagtaactggtcaaagaat 653 |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 cgaatactaccccaagttgcagtcttgtgtgccttttactccagtaactggtcaaagaat 695 Query: 654 attacttcgagatacatcctaccaggatcaagtatttgatgctctagtaaaagctttgaa 713 |||| ||||||||||| | ||| ||||||||| ||||| ||| |||| |||| ||||| Sbjct: 696 attagttcgagatacaccatacagggatcaagtttttgaagctttagtgaaagaattgaa 755 Query: 714 gaatctgactaccaagctgaaggtgtcatcactacatataacttttccatctgaaggcga 773 || | ||||||||||||||||||||||||| |||||||||| |||||||||||||| || Sbjct: 756 gagtttgactaccaagctgaaggtgtcatcgttacatataacatttccatctgaaggtga 815 Query: 774 attcagtaagttgaaggatagtgggttgttgcagagaacagggatgcaataccactggag 833 |||||| |||||||||||||||| ||| |||||||||| |||||||| || |||||||| Sbjct: 816 attcagcaagttgaaggatagtgagttcttgcagagaatcgggatgcagtatcactggag 875 Query: 834 aaatcgaaattacaaaagttttgatgagtttttgatggatatgaagcagcccaaacggaa 893 ||||||| |||||| ||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 876 aaatcgagattacagaagttttgacgagtttttaatggatttgaagcaacccaaacggaa 935 Query: 894 gaatatccgacaggaacgcaaaaagattcctgctcaaaatttgaaaatgaagcgacttcg 953 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 gaatatcagacaagaacgtaaaaagattcctgctcaaaatttgaaaatgaagcgacttcg 995 Query: 954 tggacatgaaataaagagcagccattgggacaccttctataaattctaccgtaacacaac 1013 |||| |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 996 tggagatgagataaagagcgagcattgggacaccttttataagttctaccgcaacacaac 1055 Query: 1014 tgataatcactggggtagaccgtacttaacaagggaattctttcacctcttgggagaaaa 1073 ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||| Sbjct: 1056 tgataatcactggggcagaccatacttgacaagggaattctttcaccgcttgggagaaaa 1115 Query: 1074 catgggcgacaaggtaatgcttattgttgctgaagatgacgataaacttgttgctggagc 1133 ||||| |||||||| |||||||||||||||||| |||||||||||| |||||| || || Sbjct: 1116 gatgggtgacaaggtgatgcttattgttgctgaacatgacgataaacatgttgccggggc 1175 Query: 1134 tcttaaccttattggaggagatacattgtttggtcgcttatggggatgcctgccaaatgc 1193 |||||||||||||||||| || ||||||||||| ||||||||||| || |||||| |||| Sbjct: 1176 tcttaaccttattggaggtgacacattgtttggccgcttatggggctgtctgccagatgc 1235 Query: 1194 ttatttccccaatttgcattttgaagcttgttattatcaggcaattgaagcagctataga 1253 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1236 ttatttccccaatttgcattttgaagcttgctattatcaggcaattgaagcagctataga 1295 Query: 1254 attaaacctgagtaaggtggaggcaggtgctcagggagaacacaagatccagcgtggtta 1313 | | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1296 actgaacctgagtaaggtggaggcaggtgctcaaggagagcacaagatccagcgtggtta 1355 Query: 1314 cctcccagtgacaacatacagctgccactacttcatggatcctggttttgcgacagctat 1373 |||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||| Sbjct: 1356 cctcccagtgacaacatacagctgccactacttcttagatcctggttttggggcagctat 1415 Query: 1374 aggagactttcttgcacatgagacagctcaggttaagcgtgttatcaaggtcctgcacga 1433 |||| | | ||||| ||||||||| ||||||||||| | |||||| ||||||||||| || Sbjct: 1416 aggaaattatcttgtacatgagacggctcaggttaaacatgttattaaggtcctgcatga 1475 Query: 1434 ttcaggtccatacaaggaggacatattgaaagaatttgcacttcagccagacgatggaat 1493 ||| || ||||||||||| || ||| |||| |||||| ||| | || |||||| | Sbjct: 1476 ttccggcccatacaaggaagatatactgaacgaatttttgcttacacaaggggatggagt 1535 Query: 1494 gtagaacatcgaaagaactttaagctatgcatatgatcataatacaagaatcagaagtag 1553 |||||||||| || |||||| ||||||| ||||| |||| | ||||| ||||||| Sbjct: 1536 gtagaacatcaaaggaacttacagctatgaatatgttcatgactcaagatgtggaagtag 1595 Query: 1554 caacaggaataatacgggtgatcccatgcctccacaaggag 1594 ||| | ||| |||||||||||||||||||||||||| Sbjct: 1596 caaaa------atatgggtgatcccatgcctccacaaggag 1630 >dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F03, full insert sequence Length = 1732 Score = 1542 bits (778), Expect = 0.0 Identities = 1260/1421 (88%), Gaps = 6/1421 (0%) Strand = Plus / Plus Query: 174 gttaaaggttactgcactttttgggtggattaggggagatacgagaacacgtgaattaat 233 |||||||||||||||| ||||||||||||||| |||||| || |||||||||||||| | Sbjct: 218 gttaaaggttactgcaatttttgggtggattaagggagacacaagaacacgtgaattgaa 277 Query: 234 cccttcggctgaatcatacacgctcacagggtcagcctcagaggcagacatgaagccacg 293 ||| || ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 278 cccatctgctgaatcatatacgcttacagggtcagcctcagaggcagacaccaagccacg 337 Query: 294 tgaggtatctatttctgttgtttcttctatcatggacattcctccagcggattgggatgc 353 |||||| ||| || |||||||||||||||| |||||||||||| |||| ||||||||||| Sbjct: 338 tgaggtttctgttgctgttgtttcttctattatggacattccttcagcagattgggatgc 397 Query: 354 atgtgctattgattcagctgatcctgaaaagttcaatccttttcttacccacgcgttcct 413 ||||| ||||||||| ||||||||| || || ||||||||||| |||||||| ||||| Sbjct: 398 ctgtgcggttgattcagttgatcctgacaattttaatccttttctgacccacgcattcct 457 Query: 414 ctcaagcttagaagaatcaggttctgcagtgaaggaaacggggtggttacctctgcatgt 473 |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 458 ctcaagcttagaggaatcgggttctgcagtgaaggaaacagggtggttacctctgcatgt 517 Query: 474 tgttgcacgggacgagaatgaaaatattataggtgttgttccactttaccttaaaagcca 533 |||||||||||| |||||||||| | | | |||||||| ||||||||||| |||||||| Sbjct: 518 tgttgcacgggatgagaatgaaactgtcgttggtgttgtcccactttacctgaaaagcca 577 Query: 534 ttctaggggagagtttgtattcgatcattcatgggcagaagcttactacagttacggact 593 ||| ||||||||||||||||| ||||| |||||||||||||||||||| || || ||||| Sbjct: 578 ttcaaggggagagtttgtatttgatcaatcatgggcagaagcttactatagctatggact 637 Query: 594 tgaatactatccaaagttacagtcttgtgtgccttttactccagtaactggtcaaagaat 653 |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cgaatactaccccaagttgcagtcttgtgtgccttttactccagtaactggtcaaagaat 697 Query: 654 attacttcgagatacatcctaccaggatcaagtatttgatgctctagtaaaagctttgaa 713 |||| ||||||||||| | ||| ||||||||| ||||| ||| |||| |||| ||||| Sbjct: 698 attagttcgagatacaccatacagggatcaagtttttgaagctttagtgaaagaattgaa 757 Query: 714 gaatctgactaccaagctgaaggtgtcatcactacatataacttttccatctgaaggcga 773 || | ||||||||||||||||||||||||| |||||||||| |||||||||||||| || Sbjct: 758 gagtttgactaccaagctgaaggtgtcatcgttacatataacatttccatctgaaggtga 817 Query: 774 attcagtaagttgaaggatagtgggttgttgcagagaacagggatgcaataccactggag 833 |||||| |||||||||||||||| ||| |||||||||| |||||||| || |||||||| Sbjct: 818 attcagcaagttgaaggatagtgagttcttgcagagaatcgggatgcagtatcactggag 877 Query: 834 aaatcgaaattacaaaagttttgatgagtttttgatggatatgaagcagcccaaacggaa 893 ||||||| |||||| ||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 878 aaatcgagattacagaagttttgacgagtttttaatggatttgaagcaacccaaacggaa 937 Query: 894 gaatatccgacaggaacgcaaaaagattcctgctcaaaatttgaaaatgaagcgacttcg 953 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 gaatatcagacaagaacgtaaaaagattcctgctcaaaatttgaaaatgaagcgacttcg 997 Query: 954 tggacatgaaataaagagcagccattgggacaccttctataaattctaccgtaacacaac 1013 |||| |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 998 tggagatgagataaagagcgagcattgggacaccttttataagttctaccgcaacacaac 1057 Query: 1014 tgataatcactggggtagaccgtacttaacaagggaattctttcacctcttgggagaaaa 1073 ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||| Sbjct: 1058 tgataatcactggggcagaccatacttgacaagggaattctttcaccgcttgggagaaaa 1117 Query: 1074 catgggcgacaaggtaatgcttattgttgctgaagatgacgataaacttgttgctggagc 1133 ||||| |||||||| |||||||||||||||||| |||||||||||| |||||| || || Sbjct: 1118 gatgggtgacaaggtgatgcttattgttgctgaacatgacgataaacatgttgccggggc 1177 Query: 1134 tcttaaccttattggaggagatacattgtttggtcgcttatggggatgcctgccaaatgc 1193 |||||||||||||||||| || ||||||||||| ||||||||||| || |||||| |||| Sbjct: 1178 tcttaaccttattggaggtgacacattgtttggccgcttatggggctgtctgccagatgc 1237 Query: 1194 ttatttccccaatttgcattttgaagcttgttattatcaggcaattgaagcagctataga 1253 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1238 ttatttccccaatttgcattttgaagcttgctattatcaggcaattgaagcagctataga 1297 Query: 1254 attaaacctgagtaaggtggaggcaggtgctcagggagaacacaagatccagcgtggtta 1313 | | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1298 actgaacctgagtaaggtggaggcaggtgctcaaggagagcacaagatccagcgtggtta 1357 Query: 1314 cctcccagtgacaacatacagctgccactacttcatggatcctggttttgcgacagctat 1373 |||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||| Sbjct: 1358 cctcccagtgacaacatacagctgccactacttcttagatcctggttttggggcagctat 1417 Query: 1374 aggagactttcttgcacatgagacagctcaggttaagcgtgttatcaaggtcctgcacga 1433 |||| | | ||||| ||||||||| ||||||||||| | |||||| ||||||||||| || Sbjct: 1418 aggaaattatcttgtacatgagacggctcaggttaaacatgttattaaggtcctgcatga 1477 Query: 1434 ttcaggtccatacaaggaggacatattgaaagaatttgcacttcagccagacgatggaat 1493 ||| || ||||||||||| || ||| |||| |||||| ||| | || |||||| | Sbjct: 1478 ttccggcccatacaaggaagatatactgaacgaatttttgcttacacaaggggatggagt 1537 Query: 1494 gtagaacatcgaaagaactttaagctatgcatatgatcataatacaagaatcagaagtag 1553 |||||||||| || |||||| ||||||| ||||| |||| | ||||| ||||||| Sbjct: 1538 gtagaacatcaaaggaacttacagctatgaatatgttcatgactcaagatgtggaagtag 1597 Query: 1554 caacaggaataatacgggtgatcccatgcctccacaaggag 1594 ||| | ||| |||||||||||||||||||||||||| Sbjct: 1598 caaaa------atatgggtgatcccatgcctccacaaggag 1632 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 280 bits (141), Expect = 2e-71 Identities = 198/217 (91%) Strand = Plus / Plus Query: 1023 ctggggtagaccgtacttaacaagggaattctttcacctcttgggagaaaacatgggcga 1082 |||||| ||||| ||||| ||||||||||||||||||| |||||||||||| ||||| || Sbjct: 22030791 ctggggcagaccatacttgacaagggaattctttcaccgcttgggagaaaagatgggtga 22030850 Query: 1083 caaggtaatgcttattgttgctgaagatgacgataaacttgttgctggagctcttaacct 1142 |||||| |||||||||||||||||| |||||||||||| |||||| || ||||||||||| Sbjct: 22030851 caaggtgatgcttattgttgctgaacatgacgataaacatgttgccggggctcttaacct 22030910 Query: 1143 tattggaggagatacattgtttggtcgcttatggggatgcctgccaaatgcttatttccc 1202 ||||||||| || ||||||||||| ||||||||||| || |||||| ||||||||||||| Sbjct: 22030911 tattggaggtgacacattgtttggccgcttatggggctgtctgccagatgcttatttccc 22030970 Query: 1203 caatttgcattttgaagcttgttattatcaggcaatt 1239 ||||||||||||||||||||| |||||||||| |||| Sbjct: 22030971 caatttgcattttgaagcttgctattatcaggtaatt 22031007 Score = 248 bits (125), Expect = 6e-62 Identities = 164/177 (92%) Strand = Plus / Plus Query: 1230 tcaggcaattgaagcagctatagaattaaacctgagtaaggtggaggcaggtgctcaggg 1289 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 22031277 tcaggcaattgaagcagctatagaactgaacctgagtaaggtggaggcaggtgctcaagg 22031336 Query: 1290 agaacacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttcat 1349 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22031337 agagcacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttctt 22031396 Query: 1350 ggatcctggttttgcgacagctataggagactttcttgcacatgagacagctcaggt 1406 ||||||||||||| | ||||||||||| | | ||||| ||||||||| |||||||| Sbjct: 22031397 agatcctggttttggggcagctataggaaattatcttgtacatgagacggctcaggt 22031453 Score = 216 bits (109), Expect = 2e-52 Identities = 178/201 (88%) Strand = Plus / Plus Query: 529 agccattctaggggagagtttgtattcgatcattcatgggcagaagcttactacagttac 588 |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || || Sbjct: 22028047 agccattcaaggggagagtttgtatttgatcaatcatgggcagaagcttactatagctat 22028106 Query: 589 ggacttgaatactatccaaagttacagtcttgtgtgccttttactccagtaactggtcaa 648 ||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 22028107 ggactcgaatactaccccaagttgcagtcttgtgtgccttttactccagtaactggtcaa 22028166 Query: 649 agaatattacttcgagatacatcctaccaggatcaagtatttgatgctctagtaaaagct 708 ||||||||| ||||||||||| | ||| ||||||||| ||||| ||| |||| |||| Sbjct: 22028167 agaatattagttcgagatacaccatacagggatcaagtttttgaagctttagtgaaagaa 22028226 Query: 709 ttgaagaatctgactaccaag 729 ||||||| | ||||||||||| Sbjct: 22028227 ttgaagagtttgactaccaag 22028247 Score = 194 bits (98), Expect = 8e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 275 aggcagacatgaagccacgtgaggtatctatttctgttgtttcttctatcatggacattc 334 ||||||||| |||||||||||||| ||| || |||||||||||||||| |||||||||| Sbjct: 22027137 aggcagacaccaagccacgtgaggtttctgttgctgttgtttcttctattatggacattc 22027196 Query: 335 ctccagcggattgggatgcatgtgctattgattcagctgatcctgaaaagttcaatcctt 394 || |||| ||||||||||| ||||| ||||||||| ||||||||| || || ||||||| Sbjct: 22027197 cttcagcagattgggatgcctgtgcagttgattcagttgatcctgacaattttaatcctt 22027256 Query: 395 ttcttacccacgcgttcctctcaagcttagaagaatcaggttctgcagtgaagg 448 |||| |||||||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 22027257 ttctgacccacgcattcctctcaagcttagaggaatcgggttctgcagtgaagg 22027310 Score = 143 bits (72), Expect = 3e-30 Identities = 108/120 (90%) Strand = Plus / Plus Query: 728 agctgaaggtgtcatcactacatataacttttccatctgaaggcgaattcagtaagttga 787 |||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 22028666 agctgaaggtgtcatcgttacatataacatttccatctgaaggtgaattcagcaagttga 22028725 Query: 788 aggatagtgggttgttgcagagaacagggatgcaataccactggagaaatcgaaattaca 847 ||||||||| ||| |||||||||| |||||||| || ||||||||||||||| |||||| Sbjct: 22028726 aggatagtgagttcttgcagagaatcgggatgcagtatcactggagaaatcgagattaca 22028785 Score = 127 bits (64), Expect = 2e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 174 gttaaaggttactgcactttttgggtggattaggggagatacgagaacacgtgaattaat 233 |||||||||||||||| ||||||||||||||| |||||| || |||||||||||||| | Sbjct: 22026959 gttaaaggttactgcaatttttgggtggattaagggagacacaagaacacgtgaattgaa 22027018 Query: 234 cccttcggctgaatcatacacgctcacagggtcagcctcagagg 277 ||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 22027019 cccatctgctgaatcatatacgcttacagggtcagcctcagagg 22027062 Score = 97.6 bits (49), Expect = 1e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 446 aggaaacggggtggttacctctgcatgttgttgcacgggacgagaatgaaaatattatag 505 ||||||| |||||||||||||||||||||||||||||||| |||||||||| | | | | Sbjct: 22027878 aggaaacagggtggttacctctgcatgttgttgcacgggatgagaatgaaactgtcgttg 22027937 Query: 506 gtgttgttccactttaccttaaaag 530 ||||||| ||||||||||| ||||| Sbjct: 22027938 gtgttgtcccactttacctgaaaag 22027962 Score = 89.7 bits (45), Expect = 3e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 917 agattcctgctcaaaatttgaaaatgaagcgacttcgtggacatgaaataaag 969 ||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 22029958 agattcctgctcaaaatttgaaaatgaagcgacttcgtggagatgagataaag 22030010 Score = 81.8 bits (41), Expect = 9e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 850 agttttgatgagtttttgatggatatgaagcagcccaaacggaagaatatccgacaggaa 909 |||||||| |||||||| |||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 22029750 agttttgacgagtttttaatggatttgaagcaacccaaacggaagaatatcagacaagaa 22029809 Query: 910 cgcaaaaag 918 || |||||| Sbjct: 22029810 cgtaaaaag 22029818 >emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 280 bits (141), Expect = 2e-71 Identities = 198/217 (91%) Strand = Plus / Plus Query: 1023 ctggggtagaccgtacttaacaagggaattctttcacctcttgggagaaaacatgggcga 1082 |||||| ||||| ||||| ||||||||||||||||||| |||||||||||| ||||| || Sbjct: 96713 ctggggcagaccatacttgacaagggaattctttcaccgcttgggagaaaagatgggtga 96772 Query: 1083 caaggtaatgcttattgttgctgaagatgacgataaacttgttgctggagctcttaacct 1142 |||||| |||||||||||||||||| |||||||||||| |||||| || ||||||||||| Sbjct: 96773 caaggtgatgcttattgttgctgaacatgacgataaacatgttgccggggctcttaacct 96832 Query: 1143 tattggaggagatacattgtttggtcgcttatggggatgcctgccaaatgcttatttccc 1202 ||||||||| || ||||||||||| ||||||||||| || |||||| ||||||||||||| Sbjct: 96833 tattggaggtgacacattgtttggccgcttatggggctgtctgccagatgcttatttccc 96892 Query: 1203 caatttgcattttgaagcttgttattatcaggcaatt 1239 ||||||||||||||||||||| |||||||||| |||| Sbjct: 96893 caatttgcattttgaagcttgctattatcaggtaatt 96929 Score = 248 bits (125), Expect = 6e-62 Identities = 164/177 (92%) Strand = Plus / Plus Query: 1230 tcaggcaattgaagcagctatagaattaaacctgagtaaggtggaggcaggtgctcaggg 1289 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 97199 tcaggcaattgaagcagctatagaactgaacctgagtaaggtggaggcaggtgctcaagg 97258 Query: 1290 agaacacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttcat 1349 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 97259 agagcacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttctt 97318 Query: 1350 ggatcctggttttgcgacagctataggagactttcttgcacatgagacagctcaggt 1406 ||||||||||||| | ||||||||||| | | ||||| ||||||||| |||||||| Sbjct: 97319 agatcctggttttggggcagctataggaaattatcttgtacatgagacggctcaggt 97375 Score = 216 bits (109), Expect = 2e-52 Identities = 178/201 (88%) Strand = Plus / Plus Query: 529 agccattctaggggagagtttgtattcgatcattcatgggcagaagcttactacagttac 588 |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || || Sbjct: 93969 agccattcaaggggagagtttgtatttgatcaatcatgggcagaagcttactatagctat 94028 Query: 589 ggacttgaatactatccaaagttacagtcttgtgtgccttttactccagtaactggtcaa 648 ||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 94029 ggactcgaatactaccccaagttgcagtcttgtgtgccttttactccagtaactggtcaa 94088 Query: 649 agaatattacttcgagatacatcctaccaggatcaagtatttgatgctctagtaaaagct 708 ||||||||| ||||||||||| | ||| ||||||||| ||||| ||| |||| |||| Sbjct: 94089 agaatattagttcgagatacaccatacagggatcaagtttttgaagctttagtgaaagaa 94148 Query: 709 ttgaagaatctgactaccaag 729 ||||||| | ||||||||||| Sbjct: 94149 ttgaagagtttgactaccaag 94169 Score = 194 bits (98), Expect = 8e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 275 aggcagacatgaagccacgtgaggtatctatttctgttgtttcttctatcatggacattc 334 ||||||||| |||||||||||||| ||| || |||||||||||||||| |||||||||| Sbjct: 93059 aggcagacaccaagccacgtgaggtttctgttgctgttgtttcttctattatggacattc 93118 Query: 335 ctccagcggattgggatgcatgtgctattgattcagctgatcctgaaaagttcaatcctt 394 || |||| ||||||||||| ||||| ||||||||| ||||||||| || || ||||||| Sbjct: 93119 cttcagcagattgggatgcctgtgcagttgattcagttgatcctgacaattttaatcctt 93178 Query: 395 ttcttacccacgcgttcctctcaagcttagaagaatcaggttctgcagtgaagg 448 |||| |||||||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 93179 ttctgacccacgcattcctctcaagcttagaggaatcgggttctgcagtgaagg 93232 Score = 143 bits (72), Expect = 3e-30 Identities = 108/120 (90%) Strand = Plus / Plus Query: 728 agctgaaggtgtcatcactacatataacttttccatctgaaggcgaattcagtaagttga 787 |||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 94588 agctgaaggtgtcatcgttacatataacatttccatctgaaggtgaattcagcaagttga 94647 Query: 788 aggatagtgggttgttgcagagaacagggatgcaataccactggagaaatcgaaattaca 847 ||||||||| ||| |||||||||| |||||||| || ||||||||||||||| |||||| Sbjct: 94648 aggatagtgagttcttgcagagaatcgggatgcagtatcactggagaaatcgagattaca 94707 Score = 127 bits (64), Expect = 2e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 174 gttaaaggttactgcactttttgggtggattaggggagatacgagaacacgtgaattaat 233 |||||||||||||||| ||||||||||||||| |||||| || |||||||||||||| | Sbjct: 92881 gttaaaggttactgcaatttttgggtggattaagggagacacaagaacacgtgaattgaa 92940 Query: 234 cccttcggctgaatcatacacgctcacagggtcagcctcagagg 277 ||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 92941 cccatctgctgaatcatatacgcttacagggtcagcctcagagg 92984 Score = 97.6 bits (49), Expect = 1e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 446 aggaaacggggtggttacctctgcatgttgttgcacgggacgagaatgaaaatattatag 505 ||||||| |||||||||||||||||||||||||||||||| |||||||||| | | | | Sbjct: 93800 aggaaacagggtggttacctctgcatgttgttgcacgggatgagaatgaaactgtcgttg 93859 Query: 506 gtgttgttccactttaccttaaaag 530 ||||||| ||||||||||| ||||| Sbjct: 93860 gtgttgtcccactttacctgaaaag 93884 Score = 89.7 bits (45), Expect = 3e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 917 agattcctgctcaaaatttgaaaatgaagcgacttcgtggacatgaaataaag 969 ||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 95880 agattcctgctcaaaatttgaaaatgaagcgacttcgtggagatgagataaag 95932 Score = 81.8 bits (41), Expect = 9e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 850 agttttgatgagtttttgatggatatgaagcagcccaaacggaagaatatccgacaggaa 909 |||||||| |||||||| |||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 95672 agttttgacgagtttttaatggatttgaagcaacccaaacggaagaatatcagacaagaa 95731 Query: 910 cgcaaaaag 918 || |||||| Sbjct: 95732 cgtaaaaag 95740 >tpd|BR000311.1| TPA_inf: Oryza sativa (japonica cultivar-group) OsRR1 gene for A-type response regulator, complete cds Length = 7000 Score = 248 bits (125), Expect = 6e-62 Identities = 164/177 (92%) Strand = Plus / Minus Query: 1230 tcaggcaattgaagcagctatagaattaaacctgagtaaggtggaggcaggtgctcaggg 1289 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct: 6802 tcaggcaattgaagcagctatagaactgaacctgagtaaggtggaggcaggtgctcaagg 6743 Query: 1290 agaacacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttcat 1349 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6742 agagcacaagatccagcgtggttacctcccagtgacaacatacagctgccactacttctt 6683 Query: 1350 ggatcctggttttgcgacagctataggagactttcttgcacatgagacagctcaggt 1406 ||||||||||||| | ||||||||||| | | ||||| ||||||||| |||||||| Sbjct: 6682 agatcctggttttggggcagctataggaaattatcttgtacatgagacggctcaggt 6626