BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf050f18 (1366 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055919.1| Oryza sativa (japonica cultivar-group) Os03g... 381 e-102 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 381 e-102 gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 381 e-102 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 127 1e-25 dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic D... 127 1e-25 >ref|NM_001055919.1| Oryza sativa (japonica cultivar-group) Os03g0216500 (Os03g0216500) mRNA, complete cds Length = 1053 Score = 381 bits (192), Expect = e-102 Identities = 303/340 (89%) Strand = Plus / Plus Query: 428 gaggagcggggtgtggaggtacgtgaagctggacccggaggccccctgctgctgcatcgc 487 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 405 gaggagcggggcgtggaggtacgtgaagctggacccggacgccccctgctgctgcatcgt 464 Query: 488 gttccaggtggcgtggcgggtggtcgtcagcgtggcgttcgcgctgctcatcttcttcgt 547 |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 465 gttccaggtggcgtggagggtggccgtcagcgtggcgttcgcgctgctcgtcttcttcgt 524 Query: 548 ggccaccaagccccggcaccccggcgtctccttcaaggtcggcaaaatcgagcagttcag 607 |||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 525 cgccaccaagccccgcgaccccggcgtcaccttcaaggtcggcaagatccagcagttcag 584 Query: 608 cctgggggaagggctggacggctcgggcgtcataaccagcttcctcaactgcaacttctc 667 ||| || ||||| ||||||||||||||||| || ||||||||||||| ||||||| || | Sbjct: 585 cctcggcgaaggcctggacggctcgggcgtgatcaccagcttcctcagctgcaacctcac 644 Query: 668 cgtcctcatggaggtggacaactactccaaggtcttcagcctgcacgtccgcccgccgct 727 |||| ||||| || |||||| |||||| ||| |||| |||||||||||||||||||| Sbjct: 645 cgtcgccatggccgtcgacaaccactccagggtgttcaccctgcacgtccgcccgccgcg 704 Query: 728 gctggagatgtcctttggccgcttcacctttgcaacctcg 767 || || ||||| || |||||||||||||| || |||||| Sbjct: 705 cctcgacatgtcgttcggccgcttcaccttcgccacctcg 744 Score = 228 bits (115), Expect = 5e-56 Identities = 160/175 (91%) Strand = Plus / Plus Query: 75 ggcatcggcgcggacgaccaggacatgcccctcttccacccctccccatgcgcctactac 134 ||||||||||||||||| || || | || || |||||||| ||||| |||||||||||| Sbjct: 16 ggcatcggcgcggacgagcaagagcttcctctgttccacccttccccgtgcgcctactac 75 Query: 135 gtgcagagcccgtccgccgcgtcgcacacgctcagccacccggcgtccgagtccacggcg 194 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 76 gtgcagagcccctccgccgcgtcgcacacgctcagccacccggcgtcggagtccacggcg 135 Query: 195 ctcatcctctcccccttccccgacgccgcgttcaccgccccccgccactcccgcg 249 ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct: 136 atcatcctctccccgttccccgacgccgcgttcgccgccccgcgccactcccgcg 190 Score = 194 bits (98), Expect = 7e-46 Identities = 191/222 (86%) Strand = Plus / Plus Query: 935 gtgaggctcttcgtggcggcgcaggagaaaccgatgtacgcggcgggccgcggtatgcag 994 |||||||| |||||||||||| ||| ||| ||||||||||||||||| ||||| |||||| Sbjct: 802 gtgaggctgttcgtggcggcggaggggaagccgatgtacgcggcggggcgcggcatgcag 861 Query: 995 gacctgctcgagtccagccagggcctgccgctgaccatcacggtgaggtcgcggtctcgg 1054 ||||||||||||||| || || |||||||| || ||||||||||| ||||||||||| Sbjct: 862 gacctgctcgagtccggcggcgggctgccgctcgccgtcacggtgagggcgcggtctcgg 921 Query: 1055 taccgagtggtgtggagcctgatcaggctgaggtatcgccacgattcccagtgcgtcgtg 1114 ||| | ||||| |||||||| | |||||||| || |||||||| |||||||||||||| Sbjct: 922 tacaggatggtggggagcctggtgaggctgagctaccgccacgacgcccagtgcgtcgtg 981 Query: 1115 tacctcaggagaatgccgcggcggaataacgccatcgccgcc 1156 ||||||||| | |||||||||||| |||||||||| |||| Sbjct: 982 cgcctcaggaggacgccgcggcggaacaacgccatcgacgcc 1023 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Plus Query: 279 tcccgcctcaccctttcccgctactcctcctcccgcggctccaacaactccttcctcg 336 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 tcccgcctcaccctgtcccgctactcctcctcccgcggctccaacaactccttcctcg 295 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 381 bits (192), Expect = e-102 Identities = 303/340 (89%) Strand = Plus / Minus Query: 428 gaggagcggggtgtggaggtacgtgaagctggacccggaggccccctgctgctgcatcgc 487 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6089466 gaggagcggggcgtggaggtacgtgaagctggacccggacgccccctgctgctgcatcgt 6089407 Query: 488 gttccaggtggcgtggcgggtggtcgtcagcgtggcgttcgcgctgctcatcttcttcgt 547 |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 6089406 gttccaggtggcgtggagggtggccgtcagcgtggcgttcgcgctgctcgtcttcttcgt 6089347 Query: 548 ggccaccaagccccggcaccccggcgtctccttcaaggtcggcaaaatcgagcagttcag 607 |||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 6089346 cgccaccaagccccgcgaccccggcgtcaccttcaaggtcggcaagatccagcagttcag 6089287 Query: 608 cctgggggaagggctggacggctcgggcgtcataaccagcttcctcaactgcaacttctc 667 ||| || ||||| ||||||||||||||||| || ||||||||||||| ||||||| || | Sbjct: 6089286 cctcggcgaaggcctggacggctcgggcgtgatcaccagcttcctcagctgcaacctcac 6089227 Query: 668 cgtcctcatggaggtggacaactactccaaggtcttcagcctgcacgtccgcccgccgct 727 |||| ||||| || |||||| |||||| ||| |||| |||||||||||||||||||| Sbjct: 6089226 cgtcgccatggccgtcgacaaccactccagggtgttcaccctgcacgtccgcccgccgcg 6089167 Query: 728 gctggagatgtcctttggccgcttcacctttgcaacctcg 767 || || ||||| || |||||||||||||| || |||||| Sbjct: 6089166 cctcgacatgtcgttcggccgcttcaccttcgccacctcg 6089127 Score = 228 bits (115), Expect = 5e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 75 ggcatcggcgcggacgaccaggacatgcccctcttccacccctccccatgcgcctactac 134 ||||||||||||||||| || || | || || |||||||| ||||| |||||||||||| Sbjct: 6089855 ggcatcggcgcggacgagcaagagcttcctctgttccacccttccccgtgcgcctactac 6089796 Query: 135 gtgcagagcccgtccgccgcgtcgcacacgctcagccacccggcgtccgagtccacggcg 194 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6089795 gtgcagagcccctccgccgcgtcgcacacgctcagccacccggcgtcggagtccacggcg 6089736 Query: 195 ctcatcctctcccccttccccgacgccgcgttcaccgccccccgccactcccgcg 249 ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct: 6089735 atcatcctctccccgttccccgacgccgcgttcgccgccccgcgccactcccgcg 6089681 Score = 194 bits (98), Expect = 7e-46 Identities = 191/222 (86%) Strand = Plus / Minus Query: 935 gtgaggctcttcgtggcggcgcaggagaaaccgatgtacgcggcgggccgcggtatgcag 994 |||||||| |||||||||||| ||| ||| ||||||||||||||||| ||||| |||||| Sbjct: 6089069 gtgaggctgttcgtggcggcggaggggaagccgatgtacgcggcggggcgcggcatgcag 6089010 Query: 995 gacctgctcgagtccagccagggcctgccgctgaccatcacggtgaggtcgcggtctcgg 1054 ||||||||||||||| || || |||||||| || ||||||||||| ||||||||||| Sbjct: 6089009 gacctgctcgagtccggcggcgggctgccgctcgccgtcacggtgagggcgcggtctcgg 6088950 Query: 1055 taccgagtggtgtggagcctgatcaggctgaggtatcgccacgattcccagtgcgtcgtg 1114 ||| | ||||| |||||||| | |||||||| || |||||||| |||||||||||||| Sbjct: 6088949 tacaggatggtggggagcctggtgaggctgagctaccgccacgacgcccagtgcgtcgtg 6088890 Query: 1115 tacctcaggagaatgccgcggcggaataacgccatcgccgcc 1156 ||||||||| | |||||||||||| |||||||||| |||| Sbjct: 6088889 cgcctcaggaggacgccgcggcggaacaacgccatcgacgcc 6088848 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Minus Query: 279 tcccgcctcaccctttcccgctactcctcctcccgcggctccaacaactccttcctcg 336 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6089633 tcccgcctcaccctgtcccgctactcctcctcccgcggctccaacaactccttcctcg 6089576 >gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 381 bits (192), Expect = e-102 Identities = 303/340 (89%) Strand = Plus / Minus Query: 428 gaggagcggggtgtggaggtacgtgaagctggacccggaggccccctgctgctgcatcgc 487 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 83729 gaggagcggggcgtggaggtacgtgaagctggacccggacgccccctgctgctgcatcgt 83670 Query: 488 gttccaggtggcgtggcgggtggtcgtcagcgtggcgttcgcgctgctcatcttcttcgt 547 |||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 83669 gttccaggtggcgtggagggtggccgtcagcgtggcgttcgcgctgctcgtcttcttcgt 83610 Query: 548 ggccaccaagccccggcaccccggcgtctccttcaaggtcggcaaaatcgagcagttcag 607 |||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 83609 cgccaccaagccccgcgaccccggcgtcaccttcaaggtcggcaagatccagcagttcag 83550 Query: 608 cctgggggaagggctggacggctcgggcgtcataaccagcttcctcaactgcaacttctc 667 ||| || ||||| ||||||||||||||||| || ||||||||||||| ||||||| || | Sbjct: 83549 cctcggcgaaggcctggacggctcgggcgtgatcaccagcttcctcagctgcaacctcac 83490 Query: 668 cgtcctcatggaggtggacaactactccaaggtcttcagcctgcacgtccgcccgccgct 727 |||| ||||| || |||||| |||||| ||| |||| |||||||||||||||||||| Sbjct: 83489 cgtcgccatggccgtcgacaaccactccagggtgttcaccctgcacgtccgcccgccgcg 83430 Query: 728 gctggagatgtcctttggccgcttcacctttgcaacctcg 767 || || ||||| || |||||||||||||| || |||||| Sbjct: 83429 cctcgacatgtcgttcggccgcttcaccttcgccacctcg 83390 Score = 228 bits (115), Expect = 5e-56 Identities = 160/175 (91%) Strand = Plus / Minus Query: 75 ggcatcggcgcggacgaccaggacatgcccctcttccacccctccccatgcgcctactac 134 ||||||||||||||||| || || | || || |||||||| ||||| |||||||||||| Sbjct: 84118 ggcatcggcgcggacgagcaagagcttcctctgttccacccttccccgtgcgcctactac 84059 Query: 135 gtgcagagcccgtccgccgcgtcgcacacgctcagccacccggcgtccgagtccacggcg 194 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84058 gtgcagagcccctccgccgcgtcgcacacgctcagccacccggcgtcggagtccacggcg 83999 Query: 195 ctcatcctctcccccttccccgacgccgcgttcaccgccccccgccactcccgcg 249 ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| Sbjct: 83998 atcatcctctccccgttccccgacgccgcgttcgccgccccgcgccactcccgcg 83944 Score = 194 bits (98), Expect = 7e-46 Identities = 191/222 (86%) Strand = Plus / Minus Query: 935 gtgaggctcttcgtggcggcgcaggagaaaccgatgtacgcggcgggccgcggtatgcag 994 |||||||| |||||||||||| ||| ||| ||||||||||||||||| ||||| |||||| Sbjct: 83332 gtgaggctgttcgtggcggcggaggggaagccgatgtacgcggcggggcgcggcatgcag 83273 Query: 995 gacctgctcgagtccagccagggcctgccgctgaccatcacggtgaggtcgcggtctcgg 1054 ||||||||||||||| || || |||||||| || ||||||||||| ||||||||||| Sbjct: 83272 gacctgctcgagtccggcggcgggctgccgctcgccgtcacggtgagggcgcggtctcgg 83213 Query: 1055 taccgagtggtgtggagcctgatcaggctgaggtatcgccacgattcccagtgcgtcgtg 1114 ||| | ||||| |||||||| | |||||||| || |||||||| |||||||||||||| Sbjct: 83212 tacaggatggtggggagcctggtgaggctgagctaccgccacgacgcccagtgcgtcgtg 83153 Query: 1115 tacctcaggagaatgccgcggcggaataacgccatcgccgcc 1156 ||||||||| | |||||||||||| |||||||||| |||| Sbjct: 83152 cgcctcaggaggacgccgcggcggaacaacgccatcgacgcc 83111 Score = 107 bits (54), Expect = 1e-19 Identities = 57/58 (98%) Strand = Plus / Minus Query: 279 tcccgcctcaccctttcccgctactcctcctcccgcggctccaacaactccttcctcg 336 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83896 tcccgcctcaccctgtcccgctactcctcctcccgcggctccaacaactccttcctcg 83839 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 127 bits (64), Expect = 1e-25 Identities = 139/164 (84%) Strand = Plus / Plus Query: 993 aggacctgctcgagtccagccagggcctgccgctgaccatcacggtgaggtcgcggtctc 1052 ||||||||||||||||| || || |||||||| || ||||||||||| ||||||||| Sbjct: 20840729 aggacctgctcgagtccggcggcgggctgccgcttgccgtcacggtgagggcgcggtctc 20840788 Query: 1053 ggtaccgagtggtgtggagcctgatcaggctgaggtatcgccacgattcccagtgcgtcg 1112 ||||||| ||||| |||||||| |||||||||| || |||||||| |||||||||||| Sbjct: 20840789 ggtaccggatggtggggagcctggtcaggctgagctaccgccacgacgcccagtgcgtcg 20840848 Query: 1113 tgtacctcaggagaatgccgcggcggaataacgccatcgccgcc 1156 || ||||||||| | |||||||||| |||||||||| |||| Sbjct: 20840849 tgcgcctcaggaggacaccgcggcggagcaacgccatcgacgcc 20840892 >dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 127 bits (64), Expect = 1e-25 Identities = 139/164 (84%) Strand = Plus / Plus Query: 993 aggacctgctcgagtccagccagggcctgccgctgaccatcacggtgaggtcgcggtctc 1052 ||||||||||||||||| || || |||||||| || ||||||||||| ||||||||| Sbjct: 32955 aggacctgctcgagtccggcggcgggctgccgcttgccgtcacggtgagggcgcggtctc 33014 Query: 1053 ggtaccgagtggtgtggagcctgatcaggctgaggtatcgccacgattcccagtgcgtcg 1112 ||||||| ||||| |||||||| |||||||||| || |||||||| |||||||||||| Sbjct: 33015 ggtaccggatggtggggagcctggtcaggctgagctaccgccacgacgcccagtgcgtcg 33074 Query: 1113 tgtacctcaggagaatgccgcggcggaataacgccatcgccgcc 1156 || ||||||||| | |||||||||| |||||||||| |||| Sbjct: 33075 tgcgcctcaggaggacaccgcggcggagcaacgccatcgacgcc 33118