BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf050a02 (887 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063196.1| Oryza sativa (japonica cultivar-group) Os06g... 579 e-162 gb|AY327040.1| Oryza sativa (japonica cultivar-group) transcript... 579 e-162 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 579 e-162 dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 579 e-162 dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 579 e-162 >ref|NM_001063196.1| Oryza sativa (japonica cultivar-group) Os06g0127100 (Os06g0127100) mRNA, complete cds Length = 764 Score = 579 bits (292), Expect = e-162 Identities = 367/392 (93%) Strand = Plus / Plus Query: 118 gcagggggagtacgcgacggtgatgtcggcgccgcccaagaggccggcggggaggaccaa 177 ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 42 gcaggaggagtacgcgacggtgacgtcggcgccgccgaagcggccggcggggaggaccaa 101 Query: 178 gttccgggagacgaggcacccggtgtaccgcggcgtgcggcggcgcgggcccgcggaacg 237 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 102 gttcagggagacgaggcacccggtgtaccgcggcgtgcggcggcgggggcccgcggggcg 161 Query: 238 gtgggtctgcgaggtgcgggagcccaacaagaagtcccgcatctggctcggcaccttcgc 297 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gtgggtgtgcgaggtcagggagcccaacaagaagtcccgcatctggctcggcaccttcgc 221 Query: 298 caccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgctcgcgctgcggggccgcgc 357 |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct: 222 caccgccgaggccgccgcgcgcgcccacgacgtcgccgcgctcgccctccgcggccgcgg 281 Query: 358 cgcgtgcctcaacttcgccgactcggcccggctgctccgcgtcgacccggccacgctcgc 417 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 282 cgcgtgcctcaacttcgccgactcggcccgcctcctccgcgtcgacccggccaccctcgc 341 Query: 418 cacccccgacgacatccgccgcgccgccatcgagctcgccgaggcgtgcccgcacgacgc 477 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 342 cacccccgacgacatccgccgcgccgccatcgagctcgccgagtcatgcccgcacgacgc 401 Query: 478 cgccgccgccgcagcgtccacgtccgccgccg 509 |||||||||||| || |||| |||||||||| Sbjct: 402 cgccgccgccgccgcctccagctccgccgccg 433 Score = 87.7 bits (44), Expect = 7e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 569 tacgggaacatggacttcgaccagcagccgtactactacgacggcacgtgcggcggcggc 628 ||||| ||||||||||||||||||| | | |||||||||||||| | | ||||||||| Sbjct: 526 tacggcaacatggacttcgaccagccgtcctactactacgacgggatg---ggcggcggc 582 Query: 629 ggcgagtggcagagttggcatatggacggcgacgacga 666 ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 583 ggcgagtaccagagctggcagatggacggcgacgacga 620 >gb|AY327040.1| Oryza sativa (japonica cultivar-group) transcription factor CBF1 mRNA, complete cds Length = 772 Score = 579 bits (292), Expect = e-162 Identities = 367/392 (93%) Strand = Plus / Plus Query: 118 gcagggggagtacgcgacggtgatgtcggcgccgcccaagaggccggcggggaggaccaa 177 ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 42 gcaggaggagtacgcgacggtgacgtcggcgccgccgaagcggccggcggggaggaccaa 101 Query: 178 gttccgggagacgaggcacccggtgtaccgcggcgtgcggcggcgcgggcccgcggaacg 237 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 102 gttcagggagacgaggcacccggtgtaccgcggcgtgcggcggcgggggcccgcggggcg 161 Query: 238 gtgggtctgcgaggtgcgggagcccaacaagaagtcccgcatctggctcggcaccttcgc 297 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 gtgggtgtgcgaggtcagggagcccaacaagaagtcccgcatctggctcggcaccttcgc 221 Query: 298 caccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgctcgcgctgcggggccgcgc 357 |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct: 222 caccgccgaggccgccgcgcgcgcccacgacgtcgccgcgctcgccctccgcggccgcgg 281 Query: 358 cgcgtgcctcaacttcgccgactcggcccggctgctccgcgtcgacccggccacgctcgc 417 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 282 cgcgtgcctcaacttcgccgactcggcccgcctcctccgcgtcgacccggccaccctcgc 341 Query: 418 cacccccgacgacatccgccgcgccgccatcgagctcgccgaggcgtgcccgcacgacgc 477 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 342 cacccccgacgacatccgccgcgccgccatcgagctcgccgagtcatgcccgcacgacgc 401 Query: 478 cgccgccgccgcagcgtccacgtccgccgccg 509 |||||||||||| || |||| |||||||||| Sbjct: 402 cgccgccgccgccgcctccagctccgccgccg 433 Score = 87.7 bits (44), Expect = 7e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 569 tacgggaacatggacttcgaccagcagccgtactactacgacggcacgtgcggcggcggc 628 ||||| ||||||||||||||||||| | | |||||||||||||| | | ||||||||| Sbjct: 526 tacggcaacatggacttcgaccagccgtcctactactacgacgggatg---ggcggcggc 582 Query: 629 ggcgagtggcagagttggcatatggacggcgacgacga 666 ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 583 ggcgagtaccagagctggcagatggacggcgacgacga 620 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 579 bits (292), Expect = e-162 Identities = 367/392 (93%) Strand = Plus / Plus Query: 118 gcagggggagtacgcgacggtgatgtcggcgccgcccaagaggccggcggggaggaccaa 177 ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 1433812 gcaggaggagtacgcgacggtgacgtcggcgccgccgaagcggccggcggggaggaccaa 1433871 Query: 178 gttccgggagacgaggcacccggtgtaccgcggcgtgcggcggcgcgggcccgcggaacg 237 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 1433872 gttcagggagacgaggcacccggtgtaccgcggcgtgcggcggcgggggcccgcggggcg 1433931 Query: 238 gtgggtctgcgaggtgcgggagcccaacaagaagtcccgcatctggctcggcaccttcgc 297 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433932 gtgggtgtgcgaggtcagggagcccaacaagaagtcccgcatctggctcggcaccttcgc 1433991 Query: 298 caccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgctcgcgctgcggggccgcgc 357 |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct: 1433992 caccgccgaggccgccgcgcgcgcccacgacgtcgccgcgctcgccctccgcggccgcgg 1434051 Query: 358 cgcgtgcctcaacttcgccgactcggcccggctgctccgcgtcgacccggccacgctcgc 417 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 1434052 cgcgtgcctcaacttcgccgactcggcccgcctcctccgcgtcgacccggccaccctcgc 1434111 Query: 418 cacccccgacgacatccgccgcgccgccatcgagctcgccgaggcgtgcccgcacgacgc 477 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1434112 cacccccgacgacatccgccgcgccgccatcgagctcgccgagtcatgcccgcacgacgc 1434171 Query: 478 cgccgccgccgcagcgtccacgtccgccgccg 509 |||||||||||| || |||| |||||||||| Sbjct: 1434172 cgccgccgccgccgcctccagctccgccgccg 1434203 Score = 87.7 bits (44), Expect = 7e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 569 tacgggaacatggacttcgaccagcagccgtactactacgacggcacgtgcggcggcggc 628 ||||| ||||||||||||||||||| | | |||||||||||||| | | ||||||||| Sbjct: 1434296 tacggcaacatggacttcgaccagccgtcctactactacgacgggatg---ggcggcggc 1434352 Query: 629 ggcgagtggcagagttggcatatggacggcgacgacga 666 ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1434353 ggcgagtaccagagctggcagatggacggcgacgacga 1434390 >dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 579 bits (292), Expect = e-162 Identities = 367/392 (93%) Strand = Plus / Plus Query: 118 gcagggggagtacgcgacggtgatgtcggcgccgcccaagaggccggcggggaggaccaa 177 ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 41098 gcaggaggagtacgcgacggtgacgtcggcgccgccgaagcggccggcggggaggaccaa 41157 Query: 178 gttccgggagacgaggcacccggtgtaccgcggcgtgcggcggcgcgggcccgcggaacg 237 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 41158 gttcagggagacgaggcacccggtgtaccgcggcgtgcggcggcgggggcccgcggggcg 41217 Query: 238 gtgggtctgcgaggtgcgggagcccaacaagaagtcccgcatctggctcggcaccttcgc 297 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41218 gtgggtgtgcgaggtcagggagcccaacaagaagtcccgcatctggctcggcaccttcgc 41277 Query: 298 caccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgctcgcgctgcggggccgcgc 357 |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct: 41278 caccgccgaggccgccgcgcgcgcccacgacgtcgccgcgctcgccctccgcggccgcgg 41337 Query: 358 cgcgtgcctcaacttcgccgactcggcccggctgctccgcgtcgacccggccacgctcgc 417 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 41338 cgcgtgcctcaacttcgccgactcggcccgcctcctccgcgtcgacccggccaccctcgc 41397 Query: 418 cacccccgacgacatccgccgcgccgccatcgagctcgccgaggcgtgcccgcacgacgc 477 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 41398 cacccccgacgacatccgccgcgccgccatcgagctcgccgagtcatgcccgcacgacgc 41457 Query: 478 cgccgccgccgcagcgtccacgtccgccgccg 509 |||||||||||| || |||| |||||||||| Sbjct: 41458 cgccgccgccgccgcctccagctccgccgccg 41489 Score = 87.7 bits (44), Expect = 7e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 569 tacgggaacatggacttcgaccagcagccgtactactacgacggcacgtgcggcggcggc 628 ||||| ||||||||||||||||||| | | |||||||||||||| | | ||||||||| Sbjct: 41582 tacggcaacatggacttcgaccagccgtcctactactacgacgggatg---ggcggcggc 41638 Query: 629 ggcgagtggcagagttggcatatggacggcgacgacga 666 ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 41639 ggcgagtaccagagctggcagatggacggcgacgacga 41676 >dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 579 bits (292), Expect = e-162 Identities = 367/392 (93%) Strand = Plus / Plus Query: 118 gcagggggagtacgcgacggtgatgtcggcgccgcccaagaggccggcggggaggaccaa 177 ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 142351 gcaggaggagtacgcgacggtgacgtcggcgccgccgaagcggccggcggggaggaccaa 142410 Query: 178 gttccgggagacgaggcacccggtgtaccgcggcgtgcggcggcgcgggcccgcggaacg 237 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 142411 gttcagggagacgaggcacccggtgtaccgcggcgtgcggcggcgggggcccgcggggcg 142470 Query: 238 gtgggtctgcgaggtgcgggagcccaacaagaagtcccgcatctggctcggcaccttcgc 297 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142471 gtgggtgtgcgaggtcagggagcccaacaagaagtcccgcatctggctcggcaccttcgc 142530 Query: 298 caccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgctcgcgctgcggggccgcgc 357 |||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct: 142531 caccgccgaggccgccgcgcgcgcccacgacgtcgccgcgctcgccctccgcggccgcgg 142590 Query: 358 cgcgtgcctcaacttcgccgactcggcccggctgctccgcgtcgacccggccacgctcgc 417 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 142591 cgcgtgcctcaacttcgccgactcggcccgcctcctccgcgtcgacccggccaccctcgc 142650 Query: 418 cacccccgacgacatccgccgcgccgccatcgagctcgccgaggcgtgcccgcacgacgc 477 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 142651 cacccccgacgacatccgccgcgccgccatcgagctcgccgagtcatgcccgcacgacgc 142710 Query: 478 cgccgccgccgcagcgtccacgtccgccgccg 509 |||||||||||| || |||| |||||||||| Sbjct: 142711 cgccgccgccgccgcctccagctccgccgccg 142742 Score = 87.7 bits (44), Expect = 7e-14 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 569 tacgggaacatggacttcgaccagcagccgtactactacgacggcacgtgcggcggcggc 628 ||||| ||||||||||||||||||| | | |||||||||||||| | | ||||||||| Sbjct: 142835 tacggcaacatggacttcgaccagccgtcctactactacgacgggatg---ggcggcggc 142891 Query: 629 ggcgagtggcagagttggcatatggacggcgacgacga 666 ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 142892 ggcgagtaccagagctggcagatggacggcgacgacga 142929