BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049p04 (1019 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY105945.1| Zea mays PCO115682 mRNA sequence 303 7e-79 ref|NM_001060593.1| Oryza sativa (japonica cultivar-group) Os04g... 280 1e-71 emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 280 1e-71 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 280 1e-71 dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 1e-71 >gb|AY105945.1| Zea mays PCO115682 mRNA sequence Length = 947 Score = 303 bits (153), Expect = 7e-79 Identities = 225/249 (90%) Strand = Plus / Plus Query: 494 cgccgtactcggacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcc 553 |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| | | Sbjct: 391 cgccgtcctcggacaagtgccccatcgacgcgctcaagctcggcgcctgcgtggacgttc 450 Query: 554 tcggcaacgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcg 613 |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 451 tcgggaacgaggtgcacgtcggcgacgccaacgtccagtgctgcccgctcgtgaagggca 510 Query: 614 tcgccggtttgtccgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacc 673 ||||||| | |||||||| |||||||| |||||| |||||||||||||| |||||||| Sbjct: 511 tcgccgggctctccgcggcggcgtgcctttgcaccgccatcaaggccaaggtgctcgaca 570 Query: 674 tatccgtctacgtgccgatcgcgctcacgctgctcgtcaactgcggttgcgccgtcccgc 733 | |||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||| Sbjct: 571 tctccgtctacgtgcccatcgcgctcgaggtgctcgtcaactgcggctgcgccgtcccgc 630 Query: 734 cgggctaca 742 | ||||||| Sbjct: 631 caggctaca 639 Score = 107 bits (54), Expect = 9e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 47 cagcaatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcct 106 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 31 cagcaatggagtccaccaagctctccgcgctgctggtgctcgccatgctcgcgctctcct 90 Query: 107 cctctcctctcgcccttgcgtg 128 | || || ||||| || ||||| Sbjct: 91 cgtccccgctcgctctcgcgtg 112 >ref|NM_001060593.1| Oryza sativa (japonica cultivar-group) Os04g0644400 (Os04g0644400) mRNA, complete cds Length = 1270 Score = 280 bits (141), Expect = 1e-71 Identities = 222/249 (89%) Strand = Plus / Plus Query: 501 ctcggacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaa 560 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 684 ctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaa 743 Query: 561 cgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccgg 620 |||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| Sbjct: 744 cgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccgg 803 Query: 621 tttgtccgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctatccgt 680 ||||||| ||||| ||||| |||||| |||||||||||||| |||||||| | | | Sbjct: 804 cctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcat 863 Query: 681 ctacgtgccgatcgcgctcacgctgctcgtcaactgcggttgcgccgtcccgccgggcta 740 |||| | || |||||||||| ||| |||||||||||||| |||| ||||||||| ||||| Sbjct: 864 ctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggcta 923 Query: 741 cacctgcgc 749 ||||||||| Sbjct: 924 cacctgcgc 932 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 50 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 109 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 62 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 121 Query: 110 ctcctctcgcccttgcgtgcaactcgtgc 138 | || |||||||| |||||| ||||||| Sbjct: 122 ccccgctcgccctcgcgtgcggctcgtgc 150 >emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 280 bits (141), Expect = 1e-71 Identities = 222/249 (89%) Strand = Plus / Minus Query: 501 ctcggacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaa 560 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 22623 ctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaa 22564 Query: 561 cgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccgg 620 |||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| Sbjct: 22563 cgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccgg 22504 Query: 621 tttgtccgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctatccgt 680 ||||||| ||||| ||||| |||||| |||||||||||||| |||||||| | | | Sbjct: 22503 cctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcat 22444 Query: 681 ctacgtgccgatcgcgctcacgctgctcgtcaactgcggttgcgccgtcccgccgggcta 740 |||| | || |||||||||| ||| |||||||||||||| |||| ||||||||| ||||| Sbjct: 22443 ctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggcta 22384 Query: 741 cacctgcgc 749 ||||||||| Sbjct: 22383 cacctgcgc 22375 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 50 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 109 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 23245 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 23186 Query: 110 ctcctctcgcccttgcgtgcaactcgtgc 138 | || |||||||| |||||| ||||||| Sbjct: 23185 ccccgctcgccctcgcgtgcggctcgtgc 23157 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 280 bits (141), Expect = 1e-71 Identities = 222/249 (89%) Strand = Plus / Minus Query: 501 ctcggacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaa 560 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 32827388 ctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaa 32827329 Query: 561 cgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccgg 620 |||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| Sbjct: 32827328 cgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccgg 32827269 Query: 621 tttgtccgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctatccgt 680 ||||||| ||||| ||||| |||||| |||||||||||||| |||||||| | | | Sbjct: 32827268 cctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcat 32827209 Query: 681 ctacgtgccgatcgcgctcacgctgctcgtcaactgcggttgcgccgtcccgccgggcta 740 |||| | || |||||||||| ||| |||||||||||||| |||| ||||||||| ||||| Sbjct: 32827208 ctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggcta 32827149 Query: 741 cacctgcgc 749 ||||||||| Sbjct: 32827148 cacctgcgc 32827140 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 50 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 109 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 32828010 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 32827951 Query: 110 ctcctctcgcccttgcgtgcaactcgtgc 138 | || |||||||| |||||| ||||||| Sbjct: 32827950 ccccgctcgccctcgcgtgcggctcgtgc 32827922 >dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 280 bits (141), Expect = 1e-71 Identities = 222/249 (89%) Strand = Plus / Plus Query: 501 ctcggacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaa 560 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 681 ctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaa 740 Query: 561 cgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccgg 620 |||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| Sbjct: 741 cgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccgg 800 Query: 621 tttgtccgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctatccgt 680 ||||||| ||||| ||||| |||||| |||||||||||||| |||||||| | | | Sbjct: 801 cctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcat 860 Query: 681 ctacgtgccgatcgcgctcacgctgctcgtcaactgcggttgcgccgtcccgccgggcta 740 |||| | || |||||||||| ||| |||||||||||||| |||| ||||||||| ||||| Sbjct: 861 ctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggcta 920 Query: 741 cacctgcgc 749 ||||||||| Sbjct: 921 cacctgcgc 929 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 50 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 109 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 59 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 118 Query: 110 ctcctctcgcccttgcgtgcaactcgtgc 138 | || |||||||| |||||| ||||||| Sbjct: 119 ccccgctcgccctcgcgtgcggctcgtgc 147