BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049o07 (1003 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060760.1| Oryza sativa (japonica cultivar-group) Os04g... 515 e-142 dbj|AK101246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 515 e-142 emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 167 1e-37 emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 167 1e-37 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 167 1e-37 >ref|NM_001060760.1| Oryza sativa (japonica cultivar-group) Os04g0672300 (Os04g0672300) mRNA, complete cds Length = 1004 Score = 515 bits (260), Expect = e-142 Identities = 427/483 (88%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 108 tcacggtccatatccatcttgagggaattggagagaacaaaagtcagtggaaagagccag 167 ||||| ||||| || |||||||||||||||| || | |||||||||||| |||| ||||| Sbjct: 113 tcacgatccatttctatcttgagggaattggggatagcaaaagtcagtgaaaagggccag 172 Query: 168 atcacaagcatggacaaggcagcaaatgtggtattggatattgaaggtctgcctcaacaa 227 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 173 atgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagcaa 232 Query: 228 cctgataaatgctgcactggtagtccaaaaatgaccagagccctatctcgcaagggttca 287 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 233 cctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggctca 292 Query: 288 aatcgcatggagaggaggggcggtgaagagcaggagcaagaggacttggcgaaaaaattt 347 ||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||| ||| || Sbjct: 293 aatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaactt 352 Query: 348 atcattaaagttgtgccatctcaaatggagcagcttaagttgcccctggtgcagaacaaa 407 || ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 353 attattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaa 412 Query: 408 actttggttgctc------ctcaatgtgcttcctgcacacctgttctaactgacactggg 461 | ||||| ||| | ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 413 gccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctggg 472 Query: 462 gaaggaaggaacaaaagatttaatcggctcacatcggttcatccccggaaaattcttctc 521 |||||||||||||| | |||||||| || || |||||||| ||||||||||| || || Sbjct: 473 gaaggaaggaacaagaagtttaatcgacttacttcggttcacccccggaaaatcctactg 532 Query: 522 ctctttgcaactctgtcgagcgtggggacgatgatactgatatacttcacgctcgccatc 581 ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 533 ttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatc 592 Query: 582 aac 584 ||| Sbjct: 593 aac 595 >dbj|AK101246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032C09, full insert sequence Length = 1004 Score = 515 bits (260), Expect = e-142 Identities = 427/483 (88%), Gaps = 6/483 (1%) Strand = Plus / Plus Query: 108 tcacggtccatatccatcttgagggaattggagagaacaaaagtcagtggaaagagccag 167 ||||| ||||| || |||||||||||||||| || | |||||||||||| |||| ||||| Sbjct: 113 tcacgatccatttctatcttgagggaattggggatagcaaaagtcagtgaaaagggccag 172 Query: 168 atcacaagcatggacaaggcagcaaatgtggtattggatattgaaggtctgcctcaacaa 227 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 173 atgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctcagcaa 232 Query: 228 cctgataaatgctgcactggtagtccaaaaatgaccagagccctatctcgcaagggttca 287 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 233 cctgataaatgctgcactggaagtccaaaaatgactagagccctatctcgcaagggctca 292 Query: 288 aatcgcatggagaggaggggcggtgaagagcaggagcaagaggacttggcgaaaaaattt 347 ||||||||||| |||||| |||||||||||||||| ||||| ||||||| ||| ||| || Sbjct: 293 aatcgcatggaaaggaggagcggtgaagagcaggaacaagatgacttggtgaagaaactt 352 Query: 348 atcattaaagttgtgccatctcaaatggagcagcttaagttgcccctggtgcagaacaaa 407 || ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 353 attattaaggttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaa 412 Query: 408 actttggttgctc------ctcaatgtgcttcctgcacacctgttctaactgacactggg 461 | ||||| ||| | ||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 413 gccttggtcactccacaatcacaatgtgctgcctgtgcacctattctaactgactctggg 472 Query: 462 gaaggaaggaacaaaagatttaatcggctcacatcggttcatccccggaaaattcttctc 521 |||||||||||||| | |||||||| || || |||||||| ||||||||||| || || Sbjct: 473 gaaggaaggaacaagaagtttaatcgacttacctcggttcacccccggaaaatcctactg 532 Query: 522 ctctttgcaactctgtcgagcgtggggacgatgatactgatatacttcacgctcgccatc 581 ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct: 533 ttctttgcaactctgtcgagcgtgggcacaatgatactgatatacttcacgctcgcaatc 592 Query: 582 aac 584 ||| Sbjct: 593 aac 595 >emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 167 bits (84), Expect = 1e-37 Identities = 96/100 (96%) Strand = Plus / Minus Query: 163 gccagatcacaagcatggacaaggcagcaaatgtggtattggatattgaaggtctgcctc 222 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 41490 gccagatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctc 41431 Query: 223 aacaacctgataaatgctgcactggtagtccaaaaatgac 262 | ||||||||||||||||||||||| |||||||||||||| Sbjct: 41430 agcaacctgataaatgctgcactggaagtccaaaaatgac 41391 Score = 137 bits (69), Expect = 1e-28 Identities = 158/188 (84%), Gaps = 6/188 (3%) Strand = Plus / Minus Query: 356 agttgtgccatctcaaatggagcagcttaagttgcccctggtgcagaacaaaactttggt 415 ||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 40681 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 40622 Query: 416 tgctcctcaat------gtgcttcctgcacacctgttctaactgacactggggaaggaag 469 |||| |||| ||||| |||| ||||| ||||||||||| ||||||||||||| Sbjct: 40621 cactccacaatcacaatgtgctgcctgtgcacctattctaactgactctggggaaggaag 40562 Query: 470 gaacaaaagatttaatcggctcacatcggttcatccccggaaaattcttctcctctttgc 529 |||||| | || ||||| || || |||||||| ||||||||||| || ||| ||||||| Sbjct: 40561 gaacaagaagttcaatcgacttacttcggttcacccccggaaaatcctactcttctttgc 40502 Query: 530 aactctgt 537 |||||||| Sbjct: 40501 aactctgt 40494 Score = 119 bits (60), Expect = 2e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 264 agagccctatctcgcaagggttcaaatcgcatggagaggaggggcggtgaagagcaggag 323 |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| Sbjct: 41306 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggag 41247 Query: 324 caagaggacttggcgaaaaaatttatcattaa 355 ||||| ||||||| ||| ||| |||| ||||| Sbjct: 41246 caagatgacttggtgaagaaacttattattaa 41215 >emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 167 bits (84), Expect = 1e-37 Identities = 96/100 (96%) Strand = Plus / Minus Query: 163 gccagatcacaagcatggacaaggcagcaaatgtggtattggatattgaaggtctgcctc 222 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 81509 gccagatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctc 81450 Query: 223 aacaacctgataaatgctgcactggtagtccaaaaatgac 262 | ||||||||||||||||||||||| |||||||||||||| Sbjct: 81449 agcaacctgataaatgctgcactggaagtccaaaaatgac 81410 Score = 137 bits (69), Expect = 1e-28 Identities = 158/188 (84%), Gaps = 6/188 (3%) Strand = Plus / Minus Query: 356 agttgtgccatctcaaatggagcagcttaagttgcccctggtgcagaacaaaactttggt 415 ||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 80687 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 80628 Query: 416 tgctcctcaat------gtgcttcctgcacacctgttctaactgacactggggaaggaag 469 |||| |||| ||||| |||| ||||| ||||||||||| ||||||||||||| Sbjct: 80627 cactccacaatcacaatgtgctgcctgtgcacctattctaactgactctggggaaggaag 80568 Query: 470 gaacaaaagatttaatcggctcacatcggttcatccccggaaaattcttctcctctttgc 529 |||||| | |||||||| || || |||||||| ||||||||||| || || ||||||| Sbjct: 80567 gaacaagaagtttaatcgacttacttcggttcacccccggaaaatcctactgttctttgc 80508 Query: 530 aactctgt 537 |||||||| Sbjct: 80507 aactctgt 80500 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 264 agagccctatctcgcaagggttcaaatcgcatggagaggaggggcggtgaagagcaggag 323 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 81325 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 81266 Query: 324 caagaggacttggcgaaaaaatttatcattaa 355 ||||| ||||||| ||| ||| |||| ||||| Sbjct: 81265 caagatgacttggtgaagaaacttattattaa 81234 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 167 bits (84), Expect = 1e-37 Identities = 96/100 (96%) Strand = Plus / Minus Query: 163 gccagatcacaagcatggacaaggcagcaaatgtggtattggatattgaaggtctgcctc 222 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 34357106 gccagatgacaagcatggacaaggcagcaaatgtggtattggatattgaagggctgcctc 34357047 Query: 223 aacaacctgataaatgctgcactggtagtccaaaaatgac 262 | ||||||||||||||||||||||| |||||||||||||| Sbjct: 34357046 agcaacctgataaatgctgcactggaagtccaaaaatgac 34357007 Score = 137 bits (69), Expect = 1e-28 Identities = 158/188 (84%), Gaps = 6/188 (3%) Strand = Plus / Minus Query: 356 agttgtgccatctcaaatggagcagcttaagttgcccctggtgcagaacaaaactttggt 415 ||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 34356284 agttgtgccatctcagttggagcagcttaagatgcccctggtgcagaacaaagccttggt 34356225 Query: 416 tgctcctcaat------gtgcttcctgcacacctgttctaactgacactggggaaggaag 469 |||| |||| ||||| |||| ||||| ||||||||||| ||||||||||||| Sbjct: 34356224 cactccacaatcacaatgtgctgcctgtgcacctattctaactgactctggggaaggaag 34356165 Query: 470 gaacaaaagatttaatcggctcacatcggttcatccccggaaaattcttctcctctttgc 529 |||||| | |||||||| || || |||||||| ||||||||||| || || ||||||| Sbjct: 34356164 gaacaagaagtttaatcgacttacttcggttcacccccggaaaatcctactgttctttgc 34356105 Query: 530 aactctgt 537 |||||||| Sbjct: 34356104 aactctgt 34356097 Score = 111 bits (56), Expect = 6e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 264 agagccctatctcgcaagggttcaaatcgcatggagaggaggggcggtgaagagcaggag 323 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 34356922 agagccctatctcgcaagggctcaaatcgcatggaaaggaggagcggtgaagagcaggaa 34356863 Query: 324 caagaggacttggcgaaaaaatttatcattaa 355 ||||| ||||||| ||| ||| |||| ||||| Sbjct: 34356862 caagatgacttggtgaagaaacttattattaa 34356831