BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049l12 (1031 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057624.1| Oryza sativa (japonica cultivar-group) Os03g... 747 0.0 dbj|AK106450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 743 0.0 gb|AC091532.14| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 198 3e-47 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence 157 1e-34 >ref|NM_001057624.1| Oryza sativa (japonica cultivar-group) Os03g0718600 (Os03g0718600) mRNA, complete cds Length = 735 Score = 747 bits (377), Expect = 0.0 Identities = 512/557 (91%) Strand = Plus / Plus Query: 261 ggccgggagaagagttcgaggcggacgctggtttaccttctcggcgtggcggcggcgatg 320 |||||||||||||| |||||| ||||||| | ||||| || |||||||| ||||||||| Sbjct: 178 ggccgggagaagagctcgaggaggacgctagcgtacctgctaggcgtggccgcggcgatg 237 Query: 321 gtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggccaccggatat 380 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 238 gtcggcgcctcctacgccgccgtcccgctctaccgccgcttctgccaggccaccggctat 297 Query: 381 ggcggcaccgtccagcgccgcgagagtgtggaggagaagatctcacggcatgctcgtgat 440 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 298 ggcggcaccgtccagcgccgcgagagtgtggaggagaagatctcacgacatgctcgagac 357 Query: 441 ggaaccacgacatcaagagagataattgtccaattgaatgctgatgttgctgatggaatg 500 ||||| || || ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 358 ggaacaacaacttcaagagagataattgtccaatttaatgctgacgttgctgatggaatg 417 Query: 501 ccatggaagttcatccctacacagagagaggtgagggttaaacctggtgaaagtgctctt 560 || ||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 418 ccgtggaaattcattccaacacagagagaagtgaaggttaaacctggtgaaagtgctctt 477 Query: 561 gcattttatactgctgaaaattgcagctcagctccaattactggtgtgtccacgtataat 620 ||||||||||||||||||||| | || ||||||||||| |||||||| ||||| ||||| Sbjct: 478 gcattttatactgctgaaaatcgtagttcagctccaataactggtgtatccacatataac 537 Query: 621 gttgctccaatgaaggctgcgatttactttaataagatacaatgtttctgctttgaggag 680 || ||||| ||||||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 538 gtagctcctatgaaggctgcaatatatttcaataagatacaatgtttttgctttgaggag 597 Query: 681 caaacacttcttccaggggagcagattgacatgccggtattcttctacatcgatcctgag 740 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 598 caaacacttcttccaggggagcagattgacatgccggtgttcttctacatcgatcctgag 657 Query: 741 ttcgagacagaccccaaaatggacggggtgaacaatatagtcctttcctacacattcttt 800 || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 658 tttgagacagaccccaaaatggaaggggtgaacaatattgtcctttcttacacattcttt 717 Query: 801 aaggtgaacgatagtta 817 ||||||||||| ||||| Sbjct: 718 aaggtgaacgacagtta 734 >dbj|AK106450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E11, full insert sequence Length = 1451 Score = 743 bits (375), Expect = 0.0 Identities = 516/563 (91%) Strand = Plus / Plus Query: 261 ggccgggagaagagttcgaggcggacgctggtttaccttctcggcgtggcggcggcgatg 320 |||||||||||||| |||||| ||||||| | ||||| || |||||||| ||||||||| Sbjct: 658 ggccgggagaagagctcgaggaggacgctagcgtacctgctaggcgtggccgcggcgatg 717 Query: 321 gtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggccaccggatat 380 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 718 gtcggcgcctcctacgccgccgtcccgctctaccgccgcttctgccaggccaccggctat 777 Query: 381 ggcggcaccgtccagcgccgcgagagtgtggaggagaagatctcacggcatgctcgtgat 440 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 778 ggcggcaccgtccagcgccgcgagagtgtggaggagaagatctcacgacatgctcgagac 837 Query: 441 ggaaccacgacatcaagagagataattgtccaattgaatgctgatgttgctgatggaatg 500 ||||| || || ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 838 ggaacaacaacttcaagagagataattgtccaatttaatgctgacgttgctgatggaatg 897 Query: 501 ccatggaagttcatccctacacagagagaggtgagggttaaacctggtgaaagtgctctt 560 || ||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 898 ccgtggaaattcattccaacacagagagaagtgaaggttaaacctggtgaaagtgctctt 957 Query: 561 gcattttatactgctgaaaattgcagctcagctccaattactggtgtgtccacgtataat 620 ||||||||||||||||||||| | || ||||||||||| |||||||| ||||| |||| Sbjct: 958 gcattttatactgctgaaaatcgtagttcagctccaataactggtgtatccacacataac 1017 Query: 621 gttgctccaatgaaggctgcgatttactttaataagatacaatgtttctgctttgaggag 680 || ||||| ||||||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 1018 gtagctcctatgaaggctgcaatatatttcaataagatacaatgtttttgctttgaggag 1077 Query: 681 caaacacttcttccaggggagcagattgacatgccggtattcttctacatcgatcctgag 740 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1078 caaacacttcttccaggggagcagattgacatgccggtgttcttctacatcgatcctgag 1137 Query: 741 ttcgagacagaccccaaaatggacggggtgaacaatatagtcctttcctacacattcttt 800 || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 1138 tttgagacagaccccaaaatggaaggggtgaacaatattgtcctttcttacacattcttt 1197 Query: 801 aaggtgaacgatagttagttgta 823 ||||||||||| ||||| ||||| Sbjct: 1198 aaggtgaacgacagttaattgta 1220 >gb|AC091532.14| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 145943 Score = 198 bits (100), Expect = 3e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 261 ggccgggagaagagttcgaggcggacgctggtttaccttctcggcgtggcggcggcgatg 320 |||||||||||||| |||||| ||||||| | ||||| || |||||||| ||||||||| Sbjct: 115386 ggccgggagaagagctcgaggaggacgctagcgtacctgctaggcgtggccgcggcgatg 115327 Query: 321 gtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggccaccggatat 380 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 115326 gtcggcgcctcctacgccgccgtcccgctctaccgccgcttctgccaggccaccggctat 115267 Query: 381 ggcggcaccgtccagcgccgcgag 404 |||||||||||||||||||||||| Sbjct: 115266 ggcggcaccgtccagcgccgcgag 115243 Score = 159 bits (80), Expect = 3e-35 Identities = 98/104 (94%) Strand = Plus / Minus Query: 720 ttcttctacatcgatcctgagttcgagacagaccccaaaatggacggggtgaacaatata 779 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 112981 ttcttctacatcgatcctgagtttgagacagaccccaaaatggaaggggtgaacaatatt 112922 Query: 780 gtcctttcctacacattctttaaggtgaacgatagttagttgta 823 |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 112921 gtcctttcttacacattctttaaggtgaacgacagttaattgta 112878 Score = 135 bits (68), Expect = 4e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 529 aggtgagggttaaacctggtgaaagtgctcttgcattttatactgctgaaaattgcagct 588 |||||| |||||||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 113781 aggtgaaggttaaacctggtgaaagtgctcttgcattttatactgctgaaaatcgtagtt 113722 Query: 589 cagctccaattactggtgtgtccacgtataatgttgctccaatgaagg 636 |||||||||| |||||||| ||||| ||||| || ||||| ||||||| Sbjct: 113721 cagctccaataactggtgtatccacatataacgtagctcctatgaagg 113674 Score = 131 bits (66), Expect = 6e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 634 aggctgcgatttactttaataagatacaatgtttctgctttgaggagcaaacacttcttc 693 ||||||| || || || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 113164 aggctgcaatatatttcaataagatacaatgtttttgctttgaggagcaaacacttcttc 113105 Query: 694 caggggagcagattgacatgccggta 719 |||||||||||||||||||||||||| Sbjct: 113104 caggggagcagattgacatgccggta 113079 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 456 agagagataattgtccaattgaatgctgatgttgctgatggaatgccatggaagttcatc 515 |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 113928 agagagataattgtccaatttaatgctgacgttgctgatggaatgccgtggaaattcatt 113869 Query: 516 cctacacagagaga 529 || ||||||||||| Sbjct: 113868 ccaacacagagaga 113855 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 198 bits (100), Expect = 3e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 261 ggccgggagaagagttcgaggcggacgctggtttaccttctcggcgtggcggcggcgatg 320 |||||||||||||| |||||| ||||||| | ||||| || |||||||| ||||||||| Sbjct: 28901130 ggccgggagaagagctcgaggaggacgctagcgtacctgctaggcgtggccgcggcgatg 28901071 Query: 321 gtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggccaccggatat 380 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 28901070 gtcggcgcctcctacgccgccgtcccgctctaccgccgcttctgccaggccaccggctat 28901011 Query: 381 ggcggcaccgtccagcgccgcgag 404 |||||||||||||||||||||||| Sbjct: 28901010 ggcggcaccgtccagcgccgcgag 28900987 Score = 159 bits (80), Expect = 3e-35 Identities = 98/104 (94%) Strand = Plus / Minus Query: 720 ttcttctacatcgatcctgagttcgagacagaccccaaaatggacggggtgaacaatata 779 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 28898725 ttcttctacatcgatcctgagtttgagacagaccccaaaatggaaggggtgaacaatatt 28898666 Query: 780 gtcctttcctacacattctttaaggtgaacgatagttagttgta 823 |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 28898665 gtcctttcttacacattctttaaggtgaacgacagttaattgta 28898622 Score = 135 bits (68), Expect = 4e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 529 aggtgagggttaaacctggtgaaagtgctcttgcattttatactgctgaaaattgcagct 588 |||||| |||||||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 28899525 aggtgaaggttaaacctggtgaaagtgctcttgcattttatactgctgaaaatcgtagtt 28899466 Query: 589 cagctccaattactggtgtgtccacgtataatgttgctccaatgaagg 636 |||||||||| |||||||| ||||| ||||| || ||||| ||||||| Sbjct: 28899465 cagctccaataactggtgtatccacatataacgtagctcctatgaagg 28899418 Score = 131 bits (66), Expect = 6e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 634 aggctgcgatttactttaataagatacaatgtttctgctttgaggagcaaacacttcttc 693 ||||||| || || || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 28898908 aggctgcaatatatttcaataagatacaatgtttttgctttgaggagcaaacacttcttc 28898849 Query: 694 caggggagcagattgacatgccggta 719 |||||||||||||||||||||||||| Sbjct: 28898848 caggggagcagattgacatgccggta 28898823 Score = 115 bits (58), Expect = 4e-22 Identities = 116/134 (86%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 258 gcgggccgggagaagagttcgaggcggacgctggttta-----ccttctcggcgtggcgg 312 ||||||||||||||||| |||||| ||||| ||| || ||| || ||||| |||| Sbjct: 28777062 gcgggccgggagaagagctcgaggaggacgttggcgtagcgtacctgctaggcgttgcgg 28777121 Query: 313 cggcgatggtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggcca 372 ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 28777122 cggcgatggtcggcgcctcctacgc-gccgtcccgctctaccgccgcttctgccaggcca 28777180 Query: 373 ccggatatggcggc 386 |||| || |||||| Sbjct: 28777181 ccggctacggcggc 28777194 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 456 agagagataattgtccaattgaatgctgatgttgctgatggaatgccatggaagttcatc 515 |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 28899672 agagagataattgtccaatttaatgctgacgttgctgatggaatgccgtggaaattcatt 28899613 Query: 516 cctacacagagaga 529 || ||||||||||| Sbjct: 28899612 ccaacacagagaga 28899599 >gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 157 bits (79), Expect = 1e-34 Identities = 97/103 (94%) Strand = Plus / Minus Query: 716 ggtattcttctacatcgatcctgagttcgagacagaccccaaaatggacggggtgaacaa 775 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 40632 ggtattcttctatatcgatcctgagtttgagacagaccccaaaatggacggggtgaacaa 40573 Query: 776 tatagtcctttcctacacattctttaaggtgaacgatagttag 818 ||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 40572 tattgttctttcgtacacattcttcaaggtgaacgatagttag 40530 Score = 131 bits (66), Expect = 6e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 634 aggctgcgatttactttaataagatacaatgtttctgctttgaggagcaaacacttcttc 693 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40809 aggctgcgatttacttcaataagatacaatgtttctgctttgaggagcaaacacttcttc 40750 Query: 694 caggggagcagattgacatgcc 715 | || || |||||||||||||| Sbjct: 40749 ctggagaacagattgacatgcc 40728 Score = 119 bits (60), Expect = 2e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 537 gttaaacctggtgaaagtgctcttgcattttatactgctgaaaattgcagctcagctcca 596 |||||||| |||||||||||||| || |||||||||||||| ||| |||| ||||| ||| Sbjct: 41777 gttaaaccgggtgaaagtgctctggctttttatactgctgagaatcgcagttcagcccca 41718 Query: 597 attactggtgtgtccacgtataatgttgctccaatgaagg 636 ||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 41717 attactggtgtatccacatataatgttgctcctatgaagg 41678 Score = 113 bits (57), Expect = 1e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 456 agagagataattgtccaattgaatgctgatgttgctgatggaatgccatggaagttcatc 515 ||||| |||||||| ||||| |||||||||||||||||||||||||| |||| ||||||| Sbjct: 41936 agagaaataattgttcaatttaatgctgatgttgctgatggaatgccgtggaggttcatc 41877 Query: 516 cctacacagagagaggt 532 ||||||||||||||||| Sbjct: 41876 cctacacagagagaggt 41860 Score = 113 bits (57), Expect = 1e-21 Identities = 117/137 (85%) Strand = Plus / Minus Query: 258 gcgggccgggagaagagttcgaggcggacgctggtttaccttctcggcgtggcggcggcg 317 ||||| ||||||||||| ||||| ||||| |||| ||||| |||||||| |||| || Sbjct: 44997 gcgggtcgggagaagaggtcgagacggactctggggtacctgctcggcgttgcggtcgcc 44938 Query: 318 atggtcggcgcctcctacgccgccgttccgctctaccgccgcttttgccaggccaccgga 377 |||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| Sbjct: 44937 atggtcggcgcctcgtacgctgccgtcccgctgtaccgtcgcttctgccaggctaccggc 44878 Query: 378 tatggcggcaccgtcca 394 || |||||||||||||| Sbjct: 44877 tacggcggcaccgtcca 44861