BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049d23 (1604 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g... 230 1e-56 dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 1e-56 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 >ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g0266500 (Os01g0266500) mRNA, complete cds Length = 1159 Score = 230 bits (116), Expect = 1e-56 Identities = 242/282 (85%), Gaps = 9/282 (3%) Strand = Plus / Plus Query: 476 ggtggatgccttcgcggcggagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 535 |||||| || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct: 110 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 169 Query: 536 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 592 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 170 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 229 Query: 593 caacctctcccagaccgccttcctcgtccgcga---ctcctcctctgccggtgacgc--- 646 |||||||||| |||||||||||||| ||||||| ||||||||| |||| | ||| Sbjct: 230 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 289 Query: 647 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtcaatctctgcgg 706 | || |||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 290 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaatctctgcgg 349 Query: 707 gcacgcgaaattggcctccgcccacttcctcttcacaaccgt 748 ||||||| |||| |||||||||||||||||||| ||||| Sbjct: 350 ccacgcgacgctggcatccgcccacttcctcttcaccaccgt 391 Score = 135 bits (68), Expect = 6e-28 Identities = 146/172 (84%) Strand = Plus / Plus Query: 984 ggatcctgtttgtggaagtgcacattgtgttttggcaccctattggggtggaaagctggg 1043 ||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 818 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 877 Query: 1044 gaaacaaaaactgacagtgtttcaagcgtctccaaggagtggaacattatacctggagtt 1103 |||||||||||| || | |||||| || || ||||||||||||||||| ||| ||||| | Sbjct: 878 gaaacaaaaacttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagct 937 Query: 1104 ggaagatgcagctaggagagtgcgaattcagggagaagctgttactgtgatg 1155 ||| | | |||||||| || || |||||||||||||| ||||||||| Sbjct: 938 ggacggcgagaacaggagagtccggatccagggagaagctgtcactgtgatg 989 >dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full insert sequence Length = 1161 Score = 230 bits (116), Expect = 1e-56 Identities = 242/282 (85%), Gaps = 9/282 (3%) Strand = Plus / Plus Query: 476 ggtggatgccttcgcggcggagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 535 |||||| || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct: 112 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 171 Query: 536 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 592 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 172 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 231 Query: 593 caacctctcccagaccgccttcctcgtccgcga---ctcctcctctgccggtgacgc--- 646 |||||||||| |||||||||||||| ||||||| ||||||||| |||| | ||| Sbjct: 232 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 291 Query: 647 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtcaatctctgcgg 706 | || |||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 292 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtgaatctctgcgg 351 Query: 707 gcacgcgaaattggcctccgcccacttcctcttcacaaccgt 748 ||||||| |||| |||||||||||||||||||| ||||| Sbjct: 352 ccacgcgacgctggcatccgcccacttcctcttcaccaccgt 393 Score = 135 bits (68), Expect = 6e-28 Identities = 146/172 (84%) Strand = Plus / Plus Query: 984 ggatcctgtttgtggaagtgcacattgtgttttggcaccctattggggtggaaagctggg 1043 ||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 820 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 879 Query: 1044 gaaacaaaaactgacagtgtttcaagcgtctccaaggagtggaacattatacctggagtt 1103 |||||||||||| || | |||||| || || ||||||||||||||||| ||| ||||| | Sbjct: 880 gaaacaaaaacttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagct 939 Query: 1104 ggaagatgcagctaggagagtgcgaattcagggagaagctgttactgtgatg 1155 ||| | | |||||||| || || |||||||||||||| ||||||||| Sbjct: 940 ggacggcgagaacaggagagtccggatccagggagaagctgtcactgtgatg 991 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 180 bits (91), Expect = 1e-41 Identities = 196/229 (85%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 476 ggtggatgccttcgcggcggagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 535 |||||| || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct: 9116217 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 9116158 Query: 536 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 592 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 9116157 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 9116098 Query: 593 caacctctcccagaccgccttcctcgtccgcga---ctcctcctctgccggtgacgc--- 646 |||||||||| |||||||||||||| ||||||| ||||||||| |||| | ||| Sbjct: 9116097 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 9116038 Query: 647 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 695 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 9116037 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 9115989 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 984 ggatcctgtttgtggaagtgcacattgtgttttggcaccctattggggtggaaagctggg 1043 ||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 9114036 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 9113977 Query: 1044 gaaacaaaaact 1055 |||||||||||| Sbjct: 9113976 gaaacaaaaact 9113965 >dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 180 bits (91), Expect = 1e-41 Identities = 196/229 (85%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 476 ggtggatgccttcgcggcggagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 535 |||||| || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct: 145224 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 145165 Query: 536 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 592 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 145164 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 145105 Query: 593 caacctctcccagaccgccttcctcgtccgcga---ctcctcctctgccggtgacgc--- 646 |||||||||| |||||||||||||| ||||||| ||||||||| |||| | ||| Sbjct: 145104 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 145045 Query: 647 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 695 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 145044 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 144996 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 984 ggatcctgtttgtggaagtgcacattgtgttttggcaccctattggggtggaaagctggg 1043 ||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 143043 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 142984 Query: 1044 gaaacaaaaact 1055 |||||||||||| Sbjct: 142983 gaaacaaaaact 142972 >dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 180 bits (91), Expect = 1e-41 Identities = 196/229 (85%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 476 ggtggatgccttcgcggcggagccgttcaagggcaaccccgccgcagtgtgcctcctcaa 535 |||||| || |||||||| |||||||||||||||||||||||||| || |||||||| | Sbjct: 16599 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 16540 Query: 536 ---ggaggaggacgccgcgtccgcggacgagcggtggatgcagtccgtcgccgccgagtt 592 |||||| | ||| ||| | ||||||||||||||||||||||||||||| |||||||| Sbjct: 16539 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 16480 Query: 593 caacctctcccagaccgccttcctcgtccgcga---ctcctcctctgccggtgacgc--- 646 |||||||||| |||||||||||||| ||||||| ||||||||| |||| | ||| Sbjct: 16479 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 16420 Query: 647 ctccaccccgcggttccacctccgctggttcactcccgttgccgaggtc 695 | || |||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct: 16419 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtc 16371 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 984 ggatcctgtttgtggaagtgcacattgtgttttggcaccctattggggtggaaagctggg 1043 ||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||| Sbjct: 14418 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 14359 Query: 1044 gaaacaaaaact 1055 |||||||||||| Sbjct: 14358 gaaacaaaaact 14347