BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049d21 (1168 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834899.1| Oryza sativa (indica cultivar-group) cDNA clone:... 519 e-144 dbj|AK243652.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 504 e-139 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 504 e-139 dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic D... 504 e-139 dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 >emb|CT834899.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111A09, full insert sequence Length = 1418 Score = 519 bits (262), Expect = e-144 Identities = 405/451 (89%), Gaps = 15/451 (3%) Strand = Plus / Plus Query: 203 ggagaacgcgccggtctgcggg---aacggtggcggaggaggg------tcggactcctc 253 |||||||||||||||||||||| ||||||||||| ||||| |||||||| || Sbjct: 240 ggagaacgcgccggtctgcgggggcaacggtggcggcggaggcggcggctcggactcgtc 299 Query: 254 ctcttcgtctaccac---caccacgacggccacggctgccggcgaagggcggaggtacga 310 ||| |||||||| || |||||||||||||||||| | |||||| |||||||||||||| Sbjct: 300 ctcgtcgtctactacgaccaccacgacggccacggccggcggcgacgggcggaggtacga 359 Query: 311 gtgccagtactgctgccgcgagttcgccaactcgcaggcgctgggcggccaccagaacgc 370 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 360 gtgccagtactgctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgc 419 Query: 371 gcacaagaaggagcggcagcagctcaagcgggcgcagctgcaggccgcggccgcggccgc 430 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 420 gcacaagaaggagcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgc 479 Query: 431 cggccggatcgcgggcggcgcctccgcgctctaccctcgcgccaacccgatggtgtccgc 490 |||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct: 480 cggccgtgtcgcgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgc 539 Query: 491 cttcgcgccgccgcctcacctcctcggcggcggcgacgcgggggccacgagctgggtcta 550 |||||| ||| | || |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 540 cttcgctccgaccccccacctcctcggcggcggcgaggcggggcccaccagctgggtcta 599 Query: 551 cttctccccgcg---cgccgcggtggccggtgggccccaggggcagcagttccacgtctc 607 |||||||||||| ||||||||||||||| ||| | ||||| |||||||||||||| || Sbjct: 600 cttctccccgcgcgccgccgcggtggccggcggggcgcagggccagcagttccacgtgtc 659 Query: 608 gcacggctgcgtcttcccgtcccgcgccgcc 638 ||||||||||||||||| |||||| |||| Sbjct: 660 ccacggctgcgtcttccccgcccgcggcgcc 690 Score = 111 bits (56), Expect = 6e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 101 tgcagtcatgagcatgacgagccccaggctaaagctcttcggcttccacgtctccgagga 160 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141 tgcagccatgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgagga 200 Query: 161 ggag 164 |||| Sbjct: 201 ggag 204 Score = 97.6 bits (49), Expect = 1e-16 Identities = 137/167 (82%), Gaps = 12/167 (7%) Strand = Plus / Plus Query: 709 acgaccaccacgaccggagggtccacgcgagtccggcggccagcctggcgagataccccg 768 |||| ||||||| |||||| |||||||||| ||||||||||||| |||||||| |||| Sbjct: 794 acgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccg 853 Query: 769 gcatggtaggcccggggatggtggtggcagagccggtggcctccgtgccggaggatgc-- 826 | |||| |||||||||||| |||||||||||| ||||||||||||| | Sbjct: 854 ---------gtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacct 904 Query: 827 -cctggggatggacctgcagctcagccttgcacccgccggcttgtga 872 ||||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 905 gcctggggcttgacctccagctcagccttgcgcccgccggcttgtga 951 >dbj|AK243652.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100088J08, full insert sequence Length = 1299 Score = 504 bits (254), Expect = e-139 Identities = 349/380 (91%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 262 ctaccaccaccacgacggccacggctgccggcgaagggcggaggtacgagtgccagtact 321 |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 307 ctacgaccaccacgacggccacggccggcggcgacgggcggaggtacgagtgccagtact 366 Query: 322 gctgccgcgagttcgccaactcgcaggcgctgggcggccaccagaacgcgcacaagaagg 381 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 367 gctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgcgcacaagaagg 426 Query: 382 agcggcagcagctcaagcgggcgcagctgcaggccgcggccgcggccgccggccggatcg 441 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 427 agcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgccggccgtgtcg 486 Query: 442 cgggcggcgcctccgcgctctaccctcgcgccaacccgatggtgtccgccttcgcgccgc 501 ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 487 cgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgccttcgctccga 546 Query: 502 cgcctcacctcctcggcggcggcgacgcgggggccacgagctgggtctacttctccccgc 561 | || |||||||||||||||||||| |||||| |||| |||||||||||||||||||||| Sbjct: 547 ccccccacctcctcggcggcggcgaggcggggcccaccagctgggtctacttctccccgc 606 Query: 562 g---cgccgcggtggccggtgggccccaggggcagcagttccacgtctcgcacggctgcg 618 | ||||||||||||||| ||| | || || |||||||||||||| || |||||||||| Sbjct: 607 gcgccgccgcggtggccggcggggcgcaaggccagcagttccacgtgtcccacggctgcg 666 Query: 619 tcttcccgtcccgcgccgcc 638 ||||||| |||||| |||| Sbjct: 667 tcttccccgcccgcggcgcc 686 Score = 111 bits (56), Expect = 6e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 101 tgcagtcatgagcatgacgagccccaggctaaagctcttcggcttccacgtctccgagga 160 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 137 tgcagccatgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgagga 196 Query: 161 ggag 164 |||| Sbjct: 197 ggag 200 Score = 97.6 bits (49), Expect = 1e-16 Identities = 137/167 (82%), Gaps = 12/167 (7%) Strand = Plus / Plus Query: 709 acgaccaccacgaccggagggtccacgcgagtccggcggccagcctggcgagataccccg 768 |||| ||||||| |||||| |||||||||| ||||||||||||| |||||||| |||| Sbjct: 790 acgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccg 849 Query: 769 gcatggtaggcccggggatggtggtggcagagccggtggcctccgtgccggaggatgc-- 826 | |||| |||||||||||| |||||||||||| ||||||||||||| | Sbjct: 850 ---------gtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacct 900 Query: 827 -cctggggatggacctgcagctcagccttgcacccgccggcttgtga 872 ||||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 901 gcctggggcttgacctccagctcagccttgcgcccgccggcttgtga 947 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 504 bits (254), Expect = e-139 Identities = 349/380 (91%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 262 ctaccaccaccacgacggccacggctgccggcgaagggcggaggtacgagtgccagtact 321 |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 1801975 ctacgaccaccacgacggccacggccggcggcgacgggcggaggtacgagtgccagtact 1801916 Query: 322 gctgccgcgagttcgccaactcgcaggcgctgggcggccaccagaacgcgcacaagaagg 381 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1801915 gctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgcgcacaagaagg 1801856 Query: 382 agcggcagcagctcaagcgggcgcagctgcaggccgcggccgcggccgccggccggatcg 441 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 1801855 agcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgccggccgtgtcg 1801796 Query: 442 cgggcggcgcctccgcgctctaccctcgcgccaacccgatggtgtccgccttcgcgccgc 501 ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1801795 cgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgccttcgctccga 1801736 Query: 502 cgcctcacctcctcggcggcggcgacgcgggggccacgagctgggtctacttctccccgc 561 | || |||||||||||||||||||| |||||| |||| |||||||||||||||||||||| Sbjct: 1801735 ccccccacctcctcggcggcggcgaggcggggcccaccagctgggtctacttctccccgc 1801676 Query: 562 gcg---ccgcggtggccggtgggccccaggggcagcagttccacgtctcgcacggctgcg 618 ||| ||||||||||||| ||| | || || |||||||||||||| || |||||||||| Sbjct: 1801675 gcgccgccgcggtggccggcggggcgcaaggccagcagttccacgtgtcccacggctgcg 1801616 Query: 619 tcttcccgtcccgcgccgcc 638 ||||||| |||||| |||| Sbjct: 1801615 tcttccccgcccgcggcgcc 1801596 Score = 176 bits (89), Expect = 1e-40 Identities = 101/105 (96%) Strand = Plus / Plus Query: 301 ggaggtacgagtgccagtactgctgccgcgagttcgccaactcgcaggcgctgggcggcc 360 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 18069893 ggaggttcgagtgccagtactgttgccgcgagttcgccaactcgcaggcgctgggcgggc 18069952 Query: 361 accagaacgcgcacaagaaggagcggcagcagctcaagcgggcgc 405 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 18069953 accagaacgcgcacaagaaggagcggcagcagctgaagcgggcgc 18069997 Score = 111 bits (56), Expect = 6e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 101 tgcagtcatgagcatgacgagccccaggctaaagctcttcggcttccacgtctccgagga 160 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1802145 tgcagccatgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgagga 1802086 Query: 161 ggag 164 |||| Sbjct: 1802085 ggag 1802082 Score = 97.6 bits (49), Expect = 1e-16 Identities = 137/167 (82%), Gaps = 12/167 (7%) Strand = Plus / Minus Query: 709 acgaccaccacgaccggagggtccacgcgagtccggcggccagcctggcgagataccccg 768 |||| ||||||| |||||| |||||||||| ||||||||||||| |||||||| |||| Sbjct: 1801492 acgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccg 1801433 Query: 769 gcatggtaggcccggggatggtggtggcagagccggtggcctccgtgccggaggatgc-- 826 | |||| |||||||||||| |||||||||||| ||||||||||||| | Sbjct: 1801432 ---------gtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacct 1801382 Query: 827 -cctggggatggacctgcagctcagccttgcacccgccggcttgtga 872 ||||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 1801381 gcctggggcttgacctccagctcagccttgcgcccgccggcttgtga 1801335 >dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 504 bits (254), Expect = e-139 Identities = 349/380 (91%), Gaps = 3/380 (0%) Strand = Plus / Minus Query: 262 ctaccaccaccacgacggccacggctgccggcgaagggcggaggtacgagtgccagtact 321 |||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 43357 ctacgaccaccacgacggccacggccggcggcgacgggcggaggtacgagtgccagtact 43298 Query: 322 gctgccgcgagttcgccaactcgcaggcgctgggcggccaccagaacgcgcacaagaagg 381 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 43297 gctgccgcgagttcgccaactcgcaggcgctcggcggccaccagaacgcgcacaagaagg 43238 Query: 382 agcggcagcagctcaagcgggcgcagctgcaggccgcggccgcggccgccggccggatcg 441 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 43237 agcggcagcagctcaagcgggcgcagctgcaggcggcggccgcggccgccggccgtgtcg 43178 Query: 442 cgggcggcgcctccgcgctctaccctcgcgccaacccgatggtgtccgccttcgcgccgc 501 ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 43177 cgggcggcgccgccgcgctctacccgcgcgccaacccgatggtctccgccttcgctccga 43118 Query: 502 cgcctcacctcctcggcggcggcgacgcgggggccacgagctgggtctacttctccccgc 561 | || |||||||||||||||||||| |||||| |||| |||||||||||||||||||||| Sbjct: 43117 ccccccacctcctcggcggcggcgaggcggggcccaccagctgggtctacttctccccgc 43058 Query: 562 gcg---ccgcggtggccggtgggccccaggggcagcagttccacgtctcgcacggctgcg 618 ||| ||||||||||||| ||| | || || |||||||||||||| || |||||||||| Sbjct: 43057 gcgccgccgcggtggccggcggggcgcaaggccagcagttccacgtgtcccacggctgcg 42998 Query: 619 tcttcccgtcccgcgccgcc 638 ||||||| |||||| |||| Sbjct: 42997 tcttccccgcccgcggcgcc 42978 Score = 111 bits (56), Expect = 6e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 101 tgcagtcatgagcatgacgagccccaggctaaagctcttcggcttccacgtctccgagga 160 ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43527 tgcagccatgagcatgacgagccccaggctaaagctcttcggcttcgacgtctccgagga 43468 Query: 161 ggag 164 |||| Sbjct: 43467 ggag 43464 Score = 97.6 bits (49), Expect = 1e-16 Identities = 137/167 (82%), Gaps = 12/167 (7%) Strand = Plus / Minus Query: 709 acgaccaccacgaccggagggtccacgcgagtccggcggccagcctggcgagataccccg 768 |||| ||||||| |||||| |||||||||| ||||||||||||| |||||||| |||| Sbjct: 42874 acgagcaccacgggcggaggatccacgcgagctcggcggccagccttgcgagatatcccg 42815 Query: 769 gcatggtaggcccggggatggtggtggcagagccggtggcctccgtgccggaggatgc-- 826 | |||| |||||||||||| |||||||||||| ||||||||||||| | Sbjct: 42814 ---------gtccggcgatggtggtggcggagccggtggccaccgtgccggaggacacct 42764 Query: 827 -cctggggatggacctgcagctcagccttgcacccgccggcttgtga 872 ||||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 42763 gcctggggcttgacctccagctcagccttgcgcccgccggcttgtga 42717 >dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 176 bits (89), Expect = 1e-40 Identities = 101/105 (96%) Strand = Plus / Plus Query: 301 ggaggtacgagtgccagtactgctgccgcgagttcgccaactcgcaggcgctgggcggcc 360 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 97134 ggaggttcgagtgccagtactgttgccgcgagttcgccaactcgcaggcgctgggcgggc 97193 Query: 361 accagaacgcgcacaagaaggagcggcagcagctcaagcgggcgc 405 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 97194 accagaacgcgcacaagaaggagcggcagcagctgaagcgggcgc 97238