BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf049a23 (960 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056344.1| Oryza sativa (japonica cultivar-group) Os03g... 250 9e-63 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 250 9e-63 gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 250 9e-63 dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 9e-63 >ref|NM_001056344.1| Oryza sativa (japonica cultivar-group) Os03g0293100 (Os03g0293100) mRNA, complete cds Length = 963 Score = 250 bits (126), Expect = 9e-63 Identities = 183/202 (90%) Strand = Plus / Plus Query: 555 gtcggggctgcccgaggcgccgagcaacatgtttgacgacagcaagcgcggcctccccaa 614 |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 604 gtcgcggctgcccgaggcgccgagcaacatgttcgacgacagcaagcgcggcctgcccaa 663 Query: 615 ggaggggtggacgttcgaggcgctgccgttcggcacggacgtgctcgtcatcgtggtctc 674 ||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | ||| Sbjct: 664 ggaagggtggacgttcgaggcgctgccgttcggcaccgacgtgatcgtcatcgccgcctc 723 Query: 675 cttctcgctcatcaccatcctcatgttcggcaccacctatctggtgtggaagctcggcgc 734 |||| ||||||||||| || |||||||||||||||| || || || |||||||||||||| Sbjct: 724 cttcacgctcatcaccgtcgtcatgttcggcaccacgtacctcgtctggaagctcggcgc 783 Query: 735 catacatttcaacgagtactag 756 ||| || |||||||||| |||| Sbjct: 784 cattcacttcaacgagttctag 805 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 367 gagccgccgaagcgggtgcccctgacagcgcgggagcggctgcgcgcggcgcgcgtgctg 426 |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 392 gagccgccgaagcgggcgccactgacggcgcgggagcggctgcgcgcggcgcgcgtgctg 451 Query: 427 ggcaagtacgcggagccggggggc 450 ||||||||||||||||| |||||| Sbjct: 452 ggcaagtacgcggagcctgggggc 475 Score = 99.6 bits (50), Expect = 2e-17 Identities = 97/112 (86%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 17 tcagttcctctccctccaaggttaccactgcaaaactaggagg---catctccagatcta 73 |||| |||||||||||||||||||| ||||| ||||||||||| | || |||||||| Sbjct: 87 tcagctcctctccctccaaggttactactgccaaactaggaggaggcgtcaccagatctt 146 Query: 74 cctcgtcctacacccagctcaccttctgctcaaggcatcccttccaaaaggc 125 ||||| | ||||| ||||||||||||||||| ||||||| |||||| ||||| Sbjct: 147 cctcgccatacacgcagctcaccttctgctcgaggcatcacttccagaaggc 198 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 478 aagaaaccggagttcgggagccgggtgctggacgcactgcgggagacggac 528 ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 530 aagaagccggagttcgggagccgggtgctggacgcgctccgggagacggac 580 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 250 bits (126), Expect = 9e-63 Identities = 183/202 (90%) Strand = Plus / Plus Query: 555 gtcggggctgcccgaggcgccgagcaacatgtttgacgacagcaagcgcggcctccccaa 614 |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10179951 gtcgcggctgcccgaggcgccgagcaacatgttcgacgacagcaagcgcggcctgcccaa 10180010 Query: 615 ggaggggtggacgttcgaggcgctgccgttcggcacggacgtgctcgtcatcgtggtctc 674 ||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | ||| Sbjct: 10180011 ggaagggtggacgttcgaggcgctgccgttcggcaccgacgtgatcgtcatcgccgcctc 10180070 Query: 675 cttctcgctcatcaccatcctcatgttcggcaccacctatctggtgtggaagctcggcgc 734 |||| ||||||||||| || |||||||||||||||| || || || |||||||||||||| Sbjct: 10180071 cttcacgctcatcaccgtcgtcatgttcggcaccacgtacctcgtctggaagctcggcgc 10180130 Query: 735 catacatttcaacgagtactag 756 ||| || |||||||||| |||| Sbjct: 10180131 cattcacttcaacgagttctag 10180152 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 367 gagccgccgaagcgggtgcccctgacagcgcgggagcggctgcgcgcggcgcgcgtgctg 426 |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 10179739 gagccgccgaagcgggcgccactgacggcgcgggagcggctgcgcgcggcgcgcgtgctg 10179798 Query: 427 ggcaagtacgcggagccggggggc 450 ||||||||||||||||| |||||| Sbjct: 10179799 ggcaagtacgcggagcctgggggc 10179822 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 478 aagaaaccggagttcgggagccgggtgctggacgcactgcgggagacggac 528 ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 10179877 aagaagccggagttcgggagccgggtgctggacgcgctccgggagacggac 10179927 >gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 250 bits (126), Expect = 9e-63 Identities = 183/202 (90%) Strand = Plus / Plus Query: 555 gtcggggctgcccgaggcgccgagcaacatgtttgacgacagcaagcgcggcctccccaa 614 |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 43263 gtcgcggctgcccgaggcgccgagcaacatgttcgacgacagcaagcgcggcctgcccaa 43322 Query: 615 ggaggggtggacgttcgaggcgctgccgttcggcacggacgtgctcgtcatcgtggtctc 674 ||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | ||| Sbjct: 43323 ggaagggtggacgttcgaggcgctgccgttcggcaccgacgtgatcgtcatcgccgcctc 43382 Query: 675 cttctcgctcatcaccatcctcatgttcggcaccacctatctggtgtggaagctcggcgc 734 |||| ||||||||||| || |||||||||||||||| || || || |||||||||||||| Sbjct: 43383 cttcacgctcatcaccgtcgtcatgttcggcaccacgtacctcgtctggaagctcggcgc 43442 Query: 735 catacatttcaacgagtactag 756 ||| || |||||||||| |||| Sbjct: 43443 cattcacttcaacgagttctag 43464 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 367 gagccgccgaagcgggtgcccctgacagcgcgggagcggctgcgcgcggcgcgcgtgctg 426 |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 43051 gagccgccgaagcgggcgccactgacggcgcgggagcggctgcgcgcggcgcgcgtgctg 43110 Query: 427 ggcaagtacgcggagccggggggc 450 ||||||||||||||||| |||||| Sbjct: 43111 ggcaagtacgcggagcctgggggc 43134 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 478 aagaaaccggagttcgggagccgggtgctggacgcactgcgggagacggac 528 ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 43189 aagaagccggagttcgggagccgggtgctggacgcgctccgggagacggac 43239 >dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C12, full insert sequence Length = 963 Score = 250 bits (126), Expect = 9e-63 Identities = 183/202 (90%) Strand = Plus / Plus Query: 555 gtcggggctgcccgaggcgccgagcaacatgtttgacgacagcaagcgcggcctccccaa 614 |||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 604 gtcgcggctgcccgaggcgccgagcaacatgttcgacgacagcaagcgcggcctgcccaa 663 Query: 615 ggaggggtggacgttcgaggcgctgccgttcggcacggacgtgctcgtcatcgtggtctc 674 ||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | ||| Sbjct: 664 ggaagggtggacgttcgaggcgctgccgttcggcaccgacgtgatcgtcatcgccgcctc 723 Query: 675 cttctcgctcatcaccatcctcatgttcggcaccacctatctggtgtggaagctcggcgc 734 |||| ||||||||||| || |||||||||||||||| || || || |||||||||||||| Sbjct: 724 cttcacgctcatcaccgtcgtcatgttcggcaccacgtacctcgtctggaagctcggcgc 783 Query: 735 catacatttcaacgagtactag 756 ||| || |||||||||| |||| Sbjct: 784 cattcacttcaacgagttctag 805 Score = 135 bits (68), Expect = 4e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 367 gagccgccgaagcgggtgcccctgacagcgcgggagcggctgcgcgcggcgcgcgtgctg 426 |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 392 gagccgccgaagcgggcgccactgacggcgcgggagcggctgcgcgcggcgcgcgtgctg 451 Query: 427 ggcaagtacgcggagccggggggc 450 ||||||||||||||||| |||||| Sbjct: 452 ggcaagtacgcggagcctgggggc 475 Score = 99.6 bits (50), Expect = 2e-17 Identities = 97/112 (86%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 17 tcagttcctctccctccaaggttaccactgcaaaactaggagg---catctccagatcta 73 |||| |||||||||||||||||||| ||||| ||||||||||| | || |||||||| Sbjct: 87 tcagctcctctccctccaaggttactactgccaaactaggaggaggcgtcaccagatctt 146 Query: 74 cctcgtcctacacccagctcaccttctgctcaaggcatcccttccaaaaggc 125 ||||| | ||||| ||||||||||||||||| ||||||| |||||| ||||| Sbjct: 147 cctcgccatacacgcagctcaccttctgctcgaggcatcacttccagaaggc 198 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 478 aagaaaccggagttcgggagccgggtgctggacgcactgcgggagacggac 528 ||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 530 aagaagccggagttcgggagccgggtgctggacgcgctccgggagacggac 580