BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf048g10 (1792 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241196.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 601 e-168 ref|NM_001068529.1| Oryza sativa (japonica cultivar-group) Os08g... 416 e-112 gb|EF555548.1| Oryza sativa (indica cultivar-group) hox27 (hox27... 383 e-102 ref|NM_001069846.1| Oryza sativa (japonica cultivar-group) Os09g... 349 2e-92 gb|AY559046.1| Oryza sativa (japonica cultivar-group) homeodomai... 349 2e-92 >dbj|AK241196.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065121H01, full insert sequence Length = 1422 Score = 601 bits (303), Expect = e-168 Identities = 402/435 (92%) Strand = Plus / Minus Query: 901 cggcggcgagcggtcgtcctcacgcgctagcgacgacgacgagggcgcgtccgcgcgcaa 960 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 841 cggcggcgagcggtcgtcctcgcgcgcgagcgacgacgacgagggcgcgtccgcgcgcaa 782 Query: 961 gaagctgcgcctctccaaggagcaatccgcgtttcttgaggagagcttcaaggagcacag 1020 ||||||||| |||||||||||||| || ||||| || ||||||||||||||||||||||| Sbjct: 781 gaagctgcgactctccaaggagcagtcggcgttcctcgaggagagcttcaaggagcacag 722 Query: 1021 cacccttaaccccaagcagaaggtggcgctggcgaagcagcttaacctgcgaccgcgcca 1080 ||| || || |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 721 cacgctgaatcccaagcagaaggtggcgctggcgaagcagctcaacctccggccgcggca 662 Query: 1081 agtggaagtctggttccagaaccgcagagccaggacgaagcttaagcagacggaggtgga 1140 |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 661 agtggaggtctggttccagaaccgccgagccaggacgaagctgaagcagacggaggtgga 602 Query: 1141 ctgcgagtatctgaagcgctgctgcgagacgctcacggaggagaaccgcaggctgcacaa 1200 ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 601 ctgcgagtacctgaagcgctgctgcgagacgctcaccgaggagaaccggcggctgcacaa 542 Query: 1201 ggagatcgccgagctacgcgcgctcaagacggcgcaccccttctacatgcacctccccgc 1260 |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 541 ggagctcgccgagctgcgcgcgctcaagacggcgcgccccttctacatgcacctcccggc 482 Query: 1261 caccaccctctccatgtgcccctcctgcgagcgcgtcgcctccaaccccgcctcggcctc 1320 ||| ||||||||||||||||||||||||||||| |||||||||||||| ||| | || || Sbjct: 481 cacgaccctctccatgtgcccctcctgcgagcgtgtcgcctccaacccggccaccgcttc 422 Query: 1321 cacctcggcccccgc 1335 ||||| |||||||| Sbjct: 421 gacctccgcccccgc 407 Score = 216 bits (109), Expect = 2e-52 Identities = 270/324 (83%), Gaps = 6/324 (1%) Strand = Plus / Minus Query: 451 gatggagctggggctgagcctgggggaggcagccgtggcggcggatgccgggaggccgga 510 ||||||||||||||||||| ||||||| || | | |||||||| |||||||| ||| Sbjct: 1303 gatggagctggggctgagcttgggggatgcggtgaccgtggcggatggcgggaggctgga 1244 Query: 511 gctggtgcttgggcttgggcttggggtcggggtcggggcggggaggggacaggagggcga 570 |||||| |||||||| ||| ||||||| |||| |||| | |||| ||| |||||| || Sbjct: 1243 gctggttcttgggctcggggttggggttggggctggggtgaggagaggagaggaggagga 1184 Query: 571 gaggtggaggagggaggaggcggtgggggcgaggagttgggcggct------gcggcctc 624 |||| ||||||||||||| | |||||| || |||| |||||||| |||||||| Sbjct: 1183 gagggggaggagggaggatgtggtgggagctgggaggtgggcggcgatggcggcggcctc 1124 Query: 625 tccggagccgtcggtgcggctcagcctcgtgtcgagccttggactccggtggccttccga 684 |||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| Sbjct: 1123 gccggagccgtcggtgcggctcagcctcgtgtcgagcctcgggctccactggccttccga 1064 Query: 685 cggaggccgttcggaggcgtcggcacgcgagttcgacgtgaaccgggcgccgtccgtggc 744 || |||||||||||| |||| || | |||||||||||||||||||||||| ||||| Sbjct: 1063 gaccgggcgttcggaggcggcggcgcgtgggttcgacgtgaaccgggcgccgtcggtggc 1004 Query: 745 ggcgggcgtggcggggatggagga 768 |||||||| | ||||||||||||| Sbjct: 1003 ggcgggcgcgccggggatggagga 980 Score = 87.7 bits (44), Expect = 1e-13 Identities = 95/112 (84%) Strand = Plus / Minus Query: 797 gccgcggcggccttgtcctcgtcgcccaacgacagcgcgggctcctttccgttggagctc 856 |||||| |||| ||||| ||||||||||||||||||| ||| ||||| ||| |||| ||| Sbjct: 960 gccgcgccggcgttgtcgtcgtcgcccaacgacagcgggggatccttcccgctggacctc 901 Query: 857 tccgcgcacggccgccgggaccccgccgaggcggcgacgcaggccggcggcg 908 |||| ||| |||| ||| | || ||||||||||||| |||||| ||||||| Sbjct: 900 tccgggcaaggcctccgtggccacgccgaggcggcggcgcagggtggcggcg 849 Score = 79.8 bits (40), Expect = 4e-11 Identities = 80/91 (87%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 1381 gcaccggccgtcgtccttcgctgcgcttttcgcggcgccccgcagcttcccgcttgccgc 1440 ||||||||||||||||||||| ||||| |||||||| |||| | |||||||||| |||| Sbjct: 340 gcaccggccgtcgtccttcgccgcgctgttcgcggcacccctcggcttcccgctgaccgc 281 Query: 1441 ccagccacagccgcggccgcggccgccggcg 1471 | ||| ||||||||||||| |||||||||| Sbjct: 280 c--gcc-cagccgcggccgccgccgccggcg 253 >ref|NM_001068529.1| Oryza sativa (japonica cultivar-group) Os08g0465000 (Os08g0465000) mRNA, complete cds Length = 1164 Score = 416 bits (210), Expect = e-112 Identities = 279/302 (92%) Strand = Plus / Plus Query: 1034 aagcagaaggtggcgctggcgaagcagcttaacctgcgaccgcgccaagtggaagtctgg 1093 ||||||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||| Sbjct: 694 aagcagaaggtggcgctggcgaagcagctcaacctccggccgcggcaagtggaggtctgg 753 Query: 1094 ttccagaaccgcagagccaggacgaagcttaagcagacggaggtggactgcgagtatctg 1153 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 754 ttccagaaccgccgagccaggacgaagctgaagcagacggaggtggactgcgagtacctg 813 Query: 1154 aagcgctgctgcgagacgctcacggaggagaaccgcaggctgcacaaggagatcgccgag 1213 ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 814 aagcgctgctgcgagacgctcaccgaggagaaccggcggctgcacaaggagctcgccgag 873 Query: 1214 ctacgcgcgctcaagacggcgcaccccttctacatgcacctccccgccaccaccctctcc 1273 || ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 874 ctgcgcgcgctcaagacggcgcgccccttctacatgcacctcccggccacgaccctctcc 933 Query: 1274 atgtgcccctcctgcgagcgcgtcgcctccaaccccgcctcggcctccacctcggccccc 1333 |||||||||||||||||||| |||||||||||||| ||| | || || ||||| |||||| Sbjct: 934 atgtgcccctcctgcgagcgtgtcgcctccaacccggccaccgcttcgacctccgccccc 993 Query: 1334 gc 1335 || Sbjct: 994 gc 995 Score = 214 bits (108), Expect = 9e-52 Identities = 269/323 (83%), Gaps = 6/323 (1%) Strand = Plus / Plus Query: 452 atggagctggggctgagcctgggggaggcagccgtggcggcggatgccgggaggccggag 511 |||||||||||||||||| ||||||| || | | |||||||| |||||||| |||| Sbjct: 1 atggagctggggctgagcttgggggatgcggtgaccgtggcggatggcgggaggctggag 60 Query: 512 ctggtgcttgggcttgggcttggggtcggggtcggggcggggaggggacaggagggcgag 571 ||||| |||||||| ||| ||||||| |||| |||| | |||| ||| |||||| ||| Sbjct: 61 ctggttcttgggctcggggttggggttggggctggggtgaggagaggagaggaggaggag 120 Query: 572 aggtggaggagggaggaggcggtgggggcgaggagttgggcggct------gcggcctct 625 ||| ||||||||||||| | |||||| || |||| |||||||| |||||||| Sbjct: 121 agggggaggagggaggatgtggtgggagctgggaggtgggcggcgatggcggcggcctcg 180 Query: 626 ccggagccgtcggtgcggctcagcctcgtgtcgagccttggactccggtggccttccgac 685 |||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| Sbjct: 181 ccggagccgtcggtgcggctcagcctcgtgtcgagcctcgggctccactggccttccgag 240 Query: 686 ggaggccgttcggaggcgtcggcacgcgagttcgacgtgaaccgggcgccgtccgtggcg 745 || |||||||||||| |||| || | |||||||||||||||||||||||| |||||| Sbjct: 241 accgggcgttcggaggcggcggcgcgtgggttcgacgtgaaccgggcgccgtcggtggcg 300 Query: 746 gcgggcgtggcggggatggagga 768 ||||||| | ||||||||||||| Sbjct: 301 gcgggcgcgccggggatggagga 323 Score = 188 bits (95), Expect = 5e-44 Identities = 116/123 (94%) Strand = Plus / Plus Query: 901 cggcggcgagcggtcgtcctcacgcgctagcgacgacgacgagggcgcgtccgcgcgcaa 960 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 462 cggcggcgagcggtcgtcctcgcgcgcgagcgacgacgacgagggcgcgtccgcgcgcaa 521 Query: 961 gaagctgcgcctctccaaggagcaatccgcgtttcttgaggagagcttcaaggagcacag 1020 ||||||||| |||||||||||||| || ||||| || ||||||||||||||||||||||| Sbjct: 522 gaagctgcgactctccaaggagcagtcggcgttcctcgaggagagcttcaaggagcacag 581 Query: 1021 cac 1023 ||| Sbjct: 582 cac 584 Score = 87.7 bits (44), Expect = 1e-13 Identities = 95/112 (84%) Strand = Plus / Plus Query: 797 gccgcggcggccttgtcctcgtcgcccaacgacagcgcgggctcctttccgttggagctc 856 |||||| |||| ||||| ||||||||||||||||||| ||| ||||| ||| |||| ||| Sbjct: 343 gccgcgccggcgttgtcgtcgtcgcccaacgacagcgggggatccttcccgctggacctc 402 Query: 857 tccgcgcacggccgccgggaccccgccgaggcggcgacgcaggccggcggcg 908 |||| ||| |||| ||| | || ||||||||||||| |||||| ||||||| Sbjct: 403 tccgggcaaggcctccgtggccacgccgaggcggcggcgcagggtggcggcg 454 Score = 79.8 bits (40), Expect = 4e-11 Identities = 80/91 (87%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 1381 gcaccggccgtcgtccttcgctgcgcttttcgcggcgccccgcagcttcccgcttgccgc 1440 ||||||||||||||||||||| ||||| |||||||| |||| | |||||||||| |||| Sbjct: 1062 gcaccggccgtcgtccttcgccgcgctgttcgcggcacccctcggcttcccgctgaccgc 1121 Query: 1441 ccagccacagccgcggccgcggccgccggcg 1471 | ||| ||||||||||||| |||||||||| Sbjct: 1122 c--gcc-cagccgcggccgccgccgccggcg 1149 >gb|EF555548.1| Oryza sativa (indica cultivar-group) hox27 (hox27) mRNA, partial cds Length = 395 Score = 383 bits (193), Expect = e-102 Identities = 262/285 (91%) Strand = Plus / Plus Query: 1051 ggcgaagcagcttaacctgcgaccgcgccaagtggaagtctggttccagaaccgcagagc 1110 |||||||||||| ||||| || ||||| |||||||| |||||||||||||||||| |||| Sbjct: 1 ggcgaagcagctcaacctccggccgcggcaagtggaggtctggttccagaaccgccgagc 60 Query: 1111 caggacgaagcttaagcagacggaggtggactgcgagtatctgaagcgctgctgcgagac 1170 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 caggacgaagctgaagcagacggaggtggactgcgagtacctgaagcgctgctgcgagac 120 Query: 1171 gctcacggaggagaaccgcaggctgcacaaggagatcgccgagctacgcgcgctcaagac 1230 |||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||| Sbjct: 121 gctcaccgaggagaaccggcggctgcacaaggagctcgccgagctgcgcgcgctcaagac 180 Query: 1231 ggcgcaccccttctacatgcacctccccgccaccaccctctccatgtgcccctcctgcga 1290 ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 181 ggcgcgccccttctacatgcacctcccggccacgaccctctccatgtgcccctcctgcga 240 Query: 1291 gcgcgtcgcctccaaccccgcctcggcctccacctcggcccccgc 1335 ||| |||||||||||||| ||| | || || ||||| |||||||| Sbjct: 241 gcgtgtcgcctccaacccggccaccgcttcgacctccgcccccgc 285 >ref|NM_001069846.1| Oryza sativa (japonica cultivar-group) Os09g0447000 (Os09g0447000) mRNA, partial cds Length = 272 Score = 349 bits (176), Expect = 2e-92 Identities = 248/272 (91%) Strand = Plus / Plus Query: 969 gcctctccaaggagcaatccgcgtttcttgaggagagcttcaaggagcacagcaccctta 1028 |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| | Sbjct: 1 gcctctccaaggagcagtccgcgttcctcgaggagagcttcaaggagcacagcaccctaa 60 Query: 1029 accccaagcagaaggtggcgctggcgaagcagcttaacctgcgaccgcgccaagtggaag 1088 |||||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||| | Sbjct: 61 accccaagcagaagctggcgctggcgaagcagctcaacctccggccgcgccaggtggagg 120 Query: 1089 tctggttccagaaccgcagagccaggacgaagcttaagcagacggaggtggactgcgagt 1148 | ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| Sbjct: 121 tgtggttccagaaccgccgcgccaggacgaagctgaagcagacggaggtggactgcgagt 180 Query: 1149 atctgaagcgctgctgcgagacgctcacggaggagaaccgcaggctgcacaaggagatcg 1208 | |||||||| |||||||||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 181 acctgaagcggtgctgcgagacgctgacggaggagaaccggcggctgcagaaggagctcg 240 Query: 1209 ccgagctacgcgcgctcaagacggcgcacccc 1240 ||||||| || ||||||||||||| ||||||| Sbjct: 241 ccgagctccgggcgctcaagacggtgcacccc 272 >gb|AY559046.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 11 (hox11) mRNA, partial cds Length = 272 Score = 349 bits (176), Expect = 2e-92 Identities = 248/272 (91%) Strand = Plus / Plus Query: 969 gcctctccaaggagcaatccgcgtttcttgaggagagcttcaaggagcacagcaccctta 1028 |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| | Sbjct: 1 gcctctccaaggagcagtccgcgttcctcgaggagagcttcaaggagcacagcaccctaa 60 Query: 1029 accccaagcagaaggtggcgctggcgaagcagcttaacctgcgaccgcgccaagtggaag 1088 |||||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||| | Sbjct: 61 accccaagcagaagctggcgctggcgaagcagctcaacctccggccgcgccaggtggagg 120 Query: 1089 tctggttccagaaccgcagagccaggacgaagcttaagcagacggaggtggactgcgagt 1148 | ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| Sbjct: 121 tgtggttccagaaccgccgcgccaggacgaagctgaagcagacggaggtggactgcgagt 180 Query: 1149 atctgaagcgctgctgcgagacgctcacggaggagaaccgcaggctgcacaaggagatcg 1208 | |||||||| |||||||||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 181 acctgaagcggtgctgcgagacgctgacggaggagaaccggcggctgcagaaggagctcg 240 Query: 1209 ccgagctacgcgcgctcaagacggcgcacccc 1240 ||||||| || ||||||||||||| ||||||| Sbjct: 241 ccgagctccgggcgctcaagacggtgcacccc 272