BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf048e12 (1124 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051738.1| Oryza sativa (japonica cultivar-group) Os01g... 246 2e-61 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 246 2e-61 dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 246 2e-61 gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 103 2e-18 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 103 2e-18 >ref|NM_001051738.1| Oryza sativa (japonica cultivar-group) Os01g0917700 (Os01g0917700) mRNA, complete cds Length = 561 Score = 246 bits (124), Expect = 2e-61 Identities = 197/222 (88%), Gaps = 12/222 (5%) Strand = Plus / Plus Query: 461 aagcccaagggggagtcgctggtggcgaggcttctcaaggggttcaagaacctgtcccag 520 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 175 aagcccaagggggagtcgctggtggcgaggcttctccgggggttcaagaacctgtcccag 234 Query: 521 atcttcgccgtctacgagga------cgaggaggatgaggag------cgggagatggtg 568 ||||||||||| |||||||| ||||||||| |||||| |||||||||||| Sbjct: 235 atcttcgccgtgtacgaggacgacggcgaggaggaggaggaggaggagcgggagatggtg 294 Query: 569 atcgggctcccgacggacgtgaagcacgtggcgcacatcgggtgggacggcagcaccaac 628 ||||| ||||| || ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 295 atcggcctccccaccgacgtaaagcacgtggcgcacatcggctgggacggcagcaccaac 354 Query: 629 accaccaacaacgtccgctcctggaaccgcgccgccccgccg 670 ||||||| || | |||||||||||||||||||||| |||||| Sbjct: 355 accaccaccagcctccgctcctggaaccgcgccgcgccgccg 396 Score = 91.7 bits (46), Expect = 6e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 312 gcaaggatcagcgtcggatggagcggttcatcgtcatccccttctcctccacctgccact 371 ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 14 gcaaggagcagcggcggatggaccggttcatcgtgatccccttctcctccacctgccgca 73 Query: 372 ccgattccagcgtcgacgtcgtcgac 397 | ||||||||||||||||||||| Sbjct: 74 atggctccagcgtcgacgtcgtcgac 99 Score = 79.8 bits (40), Expect = 2e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 734 cagcagcaggctcccctgccggccttctccactcgacagttcgagctcgccatggccgcg 793 ||||||||| | || |||||||| ||||||| || |||||||||||||||||||| ||| Sbjct: 466 cagcagcagccgccgctgccggcgttctccatgcggcagttcgagctcgccatggcggcg 525 Query: 794 caggccgccgcc 805 |||||||||||| Sbjct: 526 caggccgccgcc 537 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 246 bits (124), Expect = 2e-61 Identities = 197/222 (88%), Gaps = 12/222 (5%) Strand = Plus / Minus Query: 461 aagcccaagggggagtcgctggtggcgaggcttctcaaggggttcaagaacctgtcccag 520 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 40023919 aagcccaagggggagtcgctggtggcgaggcttctccgggggttcaagaacctgtcccag 40023860 Query: 521 atcttcgccgtctacgagga------cgaggaggatgaggag------cgggagatggtg 568 ||||||||||| |||||||| ||||||||| |||||| |||||||||||| Sbjct: 40023859 atcttcgccgtgtacgaggacgacggcgaggaggaggaggaggaggagcgggagatggtg 40023800 Query: 569 atcgggctcccgacggacgtgaagcacgtggcgcacatcgggtgggacggcagcaccaac 628 ||||| ||||| || ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 40023799 atcggcctccccaccgacgtaaagcacgtggcgcacatcggctgggacggcagcaccaac 40023740 Query: 629 accaccaacaacgtccgctcctggaaccgcgccgccccgccg 670 ||||||| || | |||||||||||||||||||||| |||||| Sbjct: 40023739 accaccaccagcctccgctcctggaaccgcgccgcgccgccg 40023698 Score = 91.7 bits (46), Expect = 6e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 312 gcaaggatcagcgtcggatggagcggttcatcgtcatccccttctcctccacctgccact 371 ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 40024191 gcaaggagcagcggcggatggaccggttcatcgtgatccccttctcctccacctgccgca 40024132 Query: 372 ccgattccagcgtcgacgtcgtcgac 397 | ||||||||||||||||||||| Sbjct: 40024131 atggctccagcgtcgacgtcgtcgac 40024106 Score = 79.8 bits (40), Expect = 2e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 734 cagcagcaggctcccctgccggccttctccactcgacagttcgagctcgccatggccgcg 793 ||||||||| | || |||||||| ||||||| || |||||||||||||||||||| ||| Sbjct: 40023628 cagcagcagccgccgctgccggcgttctccatgcggcagttcgagctcgccatggcggcg 40023569 Query: 794 caggccgccgcc 805 |||||||||||| Sbjct: 40023568 caggccgccgcc 40023557 >dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 246 bits (124), Expect = 2e-61 Identities = 197/222 (88%), Gaps = 12/222 (5%) Strand = Plus / Minus Query: 461 aagcccaagggggagtcgctggtggcgaggcttctcaaggggttcaagaacctgtcccag 520 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115370 aagcccaagggggagtcgctggtggcgaggcttctccgggggttcaagaacctgtcccag 115311 Query: 521 atcttcgccgtctacgagga------cgaggaggatgaggag------cgggagatggtg 568 ||||||||||| |||||||| ||||||||| |||||| |||||||||||| Sbjct: 115310 atcttcgccgtgtacgaggacgacggcgaggaggaggaggaggaggagcgggagatggtg 115251 Query: 569 atcgggctcccgacggacgtgaagcacgtggcgcacatcgggtgggacggcagcaccaac 628 ||||| ||||| || ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 115250 atcggcctccccaccgacgtaaagcacgtggcgcacatcggctgggacggcagcaccaac 115191 Query: 629 accaccaacaacgtccgctcctggaaccgcgccgccccgccg 670 ||||||| || | |||||||||||||||||||||| |||||| Sbjct: 115190 accaccaccagcctccgctcctggaaccgcgccgcgccgccg 115149 Score = 91.7 bits (46), Expect = 6e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 312 gcaaggatcagcgtcggatggagcggttcatcgtcatccccttctcctccacctgccact 371 ||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 115642 gcaaggagcagcggcggatggaccggttcatcgtgatccccttctcctccacctgccgca 115583 Query: 372 ccgattccagcgtcgacgtcgtcgac 397 | ||||||||||||||||||||| Sbjct: 115582 atggctccagcgtcgacgtcgtcgac 115557 Score = 79.8 bits (40), Expect = 2e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 734 cagcagcaggctcccctgccggccttctccactcgacagttcgagctcgccatggccgcg 793 ||||||||| | || |||||||| ||||||| || |||||||||||||||||||| ||| Sbjct: 115079 cagcagcagccgccgctgccggcgttctccatgcggcagttcgagctcgccatggcggcg 115020 Query: 794 caggccgccgcc 805 |||||||||||| Sbjct: 115019 caggccgccgcc 115008 >gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 591 agcacgtggcgcacatcgggtgggacggcagcaccaacaccaccaacaacgtccgctcct 650 ||||||||||||||||||| |||||||||||||| |||||||||| || | ||||||| | Sbjct: 113446 agcacgtggcgcacatcggctgggacggcagcacaaacaccaccaccagcctccgctcat 113505 Query: 651 ggaaccgcgccgccccgccg 670 ||||||||||||| |||||| Sbjct: 113506 ggaaccgcgccgcgccgccg 113525 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 103 bits (52), Expect = 2e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 591 agcacgtggcgcacatcgggtgggacggcagcaccaacaccaccaacaacgtccgctcct 650 ||||||||||||||||||| |||||||||||||| |||||||||| || | ||||||| | Sbjct: 21231287 agcacgtggcgcacatcggctgggacggcagcacaaacaccaccaccagcctccgctcat 21231346 Query: 651 ggaaccgcgccgccccgccg 670 ||||||||||||| |||||| Sbjct: 21231347 ggaaccgcgccgcgccgccg 21231366