BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf047n12 (1587 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061358.1| Oryza sativa (japonica cultivar-group) Os05g... 886 0.0 gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome... 488 e-134 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 488 e-134 >ref|NM_001061358.1| Oryza sativa (japonica cultivar-group) Os05g0182900 (Os05g0182900) mRNA, complete cds Length = 1041 Score = 886 bits (447), Expect = 0.0 Identities = 880/1023 (86%), Gaps = 6/1023 (0%) Strand = Plus / Plus Query: 276 caactctaagatcaaaagggcaagagccacaaattggcctacagtgatgtcaaagtttgt 335 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 15 caactctaagatcaaaagggcaagagccacgaattggcctacagtcatgtcaaagtttgt 74 Query: 336 gcttgattggtatcttgagaagaagaaggggatgccgcctaagaccaagttcaagaagat 395 |||||||||||| ||| |||||||||||| |||||| || |||||||||||||||||||| Sbjct: 75 gcttgattggtaccttcagaagaagaaggagatgccacccaagaccaagttcaagaagat 134 Query: 396 gcaccaccattgttgcacatctgcactaaatgctagatttgagacaactttcactgttga 455 ||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 135 gcaccaccattattgcacgaccgtactaaatgctagatttgagacaactttcactgttga 194 Query: 456 tcaggtccatcgccactttaagcgcttcaaggaggtttggaatatagtggcccgttatat 515 ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 195 tcaggtccaccgccactttaggcgcttcaaggaggtttggaatattgtggcccgttatat 254 Query: 516 gaatgagagtgggagcaggttcgacaagaaacataagatgcttatactaccttcttcaac 575 |||| ||||||||| ||||| ||||||||||| || ||||| ||||||||| ||||||| Sbjct: 255 gaatatgagtgggagtaggtttgacaagaaacacaaaatgctaatactacctccttcaac 314 Query: 576 tatgtctgatttacctatagcagaacgtgctattctcgctaaacccattccgttcttcga 635 | || || | ||||||||||||| ||||| ||||| | |||||| ||||| |||||||| Sbjct: 315 tttggctagtctacctatagcagagcgtgcaattcttgttaaaccaattccattcttcga 374 Query: 636 ccatttgcaagatctcttcagcgattgcctagtcgatggtgccttcatgacagacccatt 695 ||| | |||| |||||| | || || ||| |||| |||| ||||||||||| | Sbjct: 375 tcatatacaagctctctttggtgagtggtcagtggatgctgcccctgtgacagacccaat 434 Query: 696 tacagctgctgactttagtgatgatcagttggaaatccaggacccattgaacatggtggc 755 | |||||||||| ||| |||||| | ||||||||| || || ||||||||| |||| Sbjct: 435 tgaagctgctgacattaacgatgatgacatggaaatcctcgatccgttgaacatgatggc 494 Query: 756 cacttgtgcagacactagggacccagatggggcagacttggacaaaattgttttggaggg 815 | ||||||||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 495 aaattgtgcagatgcaagggaccctgatggggcagacttggacaagtttgttttggagga 554 Query: 816 tgaagatgactgtaatgaagtggcagcaagcagcggtgcggtgccttgtgaagtgatgtc 875 ||||||||||||| |||| ||||||||||| || | ||| |||||||||||||||||||| Sbjct: 555 tgaagatgactgtcatgaggtggcagcaagtagtgatgcagtgccttgtgaagtgatgtc 614 Query: 876 aggcacaagtgcaccatctgcccagccatccggatcatttgccgagagcacgatggctgc 935 | ||| ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 615 tgacactagtgcaccatctgcccagccatctggatcctttgctgagagcacaatggctgc 674 Query: 936 tctcaagcctaccttgaagaagtgcaaaatagtcagca-aagaaaaa-----ccaaatcc 989 |||||||||| ||||||||||||||| ||||||||| || ||||| ||||| || Sbjct: 675 tctcaagcctggattgaagaagtgcaaagtagtcagcagaacaaaaacaaccccaaaccc 734 Query: 990 aaaaccgcagactcctgcgccacatgatggcaggaacagggatgtgttgaatagttcctt 1049 |||||||||| | || | |||||||||||||||||| |||| || | || ||| |||| Sbjct: 735 aaaaccgcaggcacccgtgccacatgatggcaggaaggcggatatggtaaagagtacctt 794 Query: 1050 agtagggaaccgtgacagtgttgcaaaaccaatacggacagcaccaacatcatcagaccc 1109 || |||| || ||||| ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 795 agctgggatccatgacacccctgcaaaaccaatacgagcagcaccgacatcatcggaccc 854 Query: 1110 gaatgctcctctgtggaagatgctaaaagaaattccgttgacacctgctgatagactatc 1169 ||||||||||| ||||| ||||| |||||||| || ||||||||||||||||||| || Sbjct: 855 aaatgctcctctatggaacatgctgaaagaaatcccactgacacctgctgatagactctc 914 Query: 1170 agttggaatttgtctttgtaagccagagttcgaagtgcatcgaagttttttcatgagcat 1229 |||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| ||| Sbjct: 915 agttggaatttgcctttgtaaaccagagtttgaagtgcatcgaagctttttcatgaacat 974 Query: 1230 gggtaaggagtacctcgaagcgtgggcccacaagttcttgtctggaggggaacctggatc 1289 ||||| ||||||||| ||||| |||||||| |||||||| |||||||| || |||||||| Sbjct: 975 gggtagggagtaccttgaagcttgggcccataagttcttatctggaggtgagcctggatc 1034 Query: 1290 ctt 1292 ||| Sbjct: 1035 ctt 1037 >gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 488 bits (246), Expect = e-134 Identities = 532/626 (84%), Gaps = 6/626 (0%) Strand = Plus / Minus Query: 683 tgacagacccatttacagctgctgactttagtgatgatcagttggaaatccaggacccat 742 ||||||||||| || |||||||||| ||| |||||| | ||||||||| || || | Sbjct: 21341 tgacagacccaattgaagctgctgacattaacgatgatgacatggaaatcctcgatccgt 21282 Query: 743 tgaacatggtggccacttgtgcagacactagggacccagatggggcagacttggacaaaa 802 |||||||| |||| | ||||||||| | |||||||| |||||||||||||||||||| Sbjct: 21281 tgaacatgatggcaaattgtgcagatgcaagggaccctgatggggcagacttggacaagt 21222 Query: 803 ttgttttggagggtgaagatgactgtaatgaagtggcagcaagcagcggtgcggtgcctt 862 |||||||||||| ||||||||||||| |||| ||||||||||| || | ||| ||||||| Sbjct: 21221 ttgttttggaggatgaagatgactgtcatgaggtggcagcaagtagtgatgcagtgcctt 21162 Query: 863 gtgaagtgatgtcaggcacaagtgcaccatctgcccagccatccggatcatttgccgaga 922 ||||||||||||| | ||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 21161 gtgaagtgatgtctgacactagtgcaccatctgcccagccatctggatcctttgctgaga 21102 Query: 923 gcacgatggctgctctcaagcctaccttgaagaagtgcaaaatagtcagca-aagaaaaa 981 |||| |||||||||||||||||| ||||||||||||||| ||||||||| || ||||| Sbjct: 21101 gcacaatggctgctctcaagcctggattgaagaagtgcaaagtagtcagcagaacaaaaa 21042 Query: 982 -----ccaaatccaaaaccgcagactcctgcgccacatgatggcaggaacagggatgtgt 1036 ||||| |||||||||||| | || | |||||||||||||||||| |||| || Sbjct: 21041 caaccccaaacccaaaaccgcaggcacccgtgccacatgatggcaggaaggcggatatgg 20982 Query: 1037 tgaatagttccttagtagggaaccgtgacagtgttgcaaaaccaatacggacagcaccaa 1096 | || ||| |||||| |||| || ||||| ||||||||||||||| ||||||| | Sbjct: 20981 taaagagtaccttagctgggatccatgacacccctgcaaaaccaatacgagcagcaccga 20922 Query: 1097 catcatcagacccgaatgctcctctgtggaagatgctaaaagaaattccgttgacacctg 1156 ||||||| ||||| ||||||||||| ||||| ||||| |||||||| || ||||||||| Sbjct: 20921 catcatcggacccaaatgctcctctatggaacatgctgaaagaaatcccactgacacctg 20862 Query: 1157 ctgatagactatcagttggaatttgtctttgtaagccagagttcgaagtgcatcgaagtt 1216 |||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| | Sbjct: 20861 ctgatagactctcagttggaatttgcctttgtaaaccagagtttgaagtgcatcgaagct 20802 Query: 1217 ttttcatgagcatgggtaaggagtacctcgaagcgtgggcccacaagttcttgtctggag 1276 ||||||||| |||||||| ||||||||| ||||| |||||||| |||||||| ||||||| Sbjct: 20801 ttttcatgaacatgggtagggagtaccttgaagcttgggcccataagttcttatctggag 20742 Query: 1277 gggaacctggatccttgtagcctgat 1302 | || ||||||||||| ||| ||||| Sbjct: 20741 gtgagcctggatccttatagtctgat 20716 Score = 414 bits (209), Expect = e-112 Identities = 278/301 (92%) Strand = Plus / Minus Query: 276 caactctaagatcaaaagggcaagagccacaaattggcctacagtgatgtcaaagtttgt 335 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 21828 caactctaagatcaaaagggcaagagccacgaattggcctacagtcatgtcaaagtttgt 21769 Query: 336 gcttgattggtatcttgagaagaagaaggggatgccgcctaagaccaagttcaagaagat 395 |||||||||||| ||| |||||||||||| |||||| || |||||||||||||||||||| Sbjct: 21768 gcttgattggtaccttcagaagaagaaggagatgccacccaagaccaagttcaagaagat 21709 Query: 396 gcaccaccattgttgcacatctgcactaaatgctagatttgagacaactttcactgttga 455 ||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 21708 gcaccaccattattgcacgaccgtactaaatgctagatttgagacaactttcactgttga 21649 Query: 456 tcaggtccatcgccactttaagcgcttcaaggaggtttggaatatagtggcccgttatat 515 ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 21648 tcaggtccaccgccactttaggcgcttcaaggaggtttggaatattgtggcccgttatat 21589 Query: 516 gaatgagagtgggagcaggttcgacaagaaacataagatgcttatactaccttcttcaac 575 |||| ||||||||| ||||| ||||||||||| || ||||| ||||||||| ||||||| Sbjct: 21588 gaatatgagtgggagtaggtttgacaagaaacacaaaatgctaatactacctccttcaac 21529 Query: 576 t 576 | Sbjct: 21528 t 21528 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 488 bits (246), Expect = e-134 Identities = 532/626 (84%), Gaps = 6/626 (0%) Strand = Plus / Minus Query: 683 tgacagacccatttacagctgctgactttagtgatgatcagttggaaatccaggacccat 742 ||||||||||| || |||||||||| ||| |||||| | ||||||||| || || | Sbjct: 4926756 tgacagacccaattgaagctgctgacattaacgatgatgacatggaaatcctcgatccgt 4926697 Query: 743 tgaacatggtggccacttgtgcagacactagggacccagatggggcagacttggacaaaa 802 |||||||| |||| | ||||||||| | |||||||| |||||||||||||||||||| Sbjct: 4926696 tgaacatgatggcaaattgtgcagatgcaagggaccctgatggggcagacttggacaagt 4926637 Query: 803 ttgttttggagggtgaagatgactgtaatgaagtggcagcaagcagcggtgcggtgcctt 862 |||||||||||| ||||||||||||| |||| ||||||||||| || | ||| ||||||| Sbjct: 4926636 ttgttttggaggatgaagatgactgtcatgaggtggcagcaagtagtgatgcagtgcctt 4926577 Query: 863 gtgaagtgatgtcaggcacaagtgcaccatctgcccagccatccggatcatttgccgaga 922 ||||||||||||| | ||| ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 4926576 gtgaagtgatgtctgacactagtgcaccatctgcccagccatctggatcctttgctgaga 4926517 Query: 923 gcacgatggctgctctcaagcctaccttgaagaagtgcaaaatagtcagca-aagaaaaa 981 |||| |||||||||||||||||| ||||||||||||||| ||||||||| || ||||| Sbjct: 4926516 gcacaatggctgctctcaagcctggattgaagaagtgcaaagtagtcagcagaacaaaaa 4926457 Query: 982 -----ccaaatccaaaaccgcagactcctgcgccacatgatggcaggaacagggatgtgt 1036 ||||| |||||||||||| | || | |||||||||||||||||| |||| || Sbjct: 4926456 caaccccaaacccaaaaccgcaggcacccgtgccacatgatggcaggaaggcggatatgg 4926397 Query: 1037 tgaatagttccttagtagggaaccgtgacagtgttgcaaaaccaatacggacagcaccaa 1096 | || ||| |||||| |||| || ||||| ||||||||||||||| ||||||| | Sbjct: 4926396 taaagagtaccttagctgggatccatgacacccctgcaaaaccaatacgagcagcaccga 4926337 Query: 1097 catcatcagacccgaatgctcctctgtggaagatgctaaaagaaattccgttgacacctg 1156 ||||||| ||||| ||||||||||| ||||| ||||| |||||||| || ||||||||| Sbjct: 4926336 catcatcggacccaaatgctcctctatggaacatgctgaaagaaatcccactgacacctg 4926277 Query: 1157 ctgatagactatcagttggaatttgtctttgtaagccagagttcgaagtgcatcgaagtt 1216 |||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| | Sbjct: 4926276 ctgatagactctcagttggaatttgcctttgtaaaccagagtttgaagtgcatcgaagct 4926217 Query: 1217 ttttcatgagcatgggtaaggagtacctcgaagcgtgggcccacaagttcttgtctggag 1276 ||||||||| |||||||| ||||||||| ||||| |||||||| |||||||| ||||||| Sbjct: 4926216 ttttcatgaacatgggtagggagtaccttgaagcttgggcccataagttcttatctggag 4926157 Query: 1277 gggaacctggatccttgtagcctgat 1302 | || ||||||||||| ||| ||||| Sbjct: 4926156 gtgagcctggatccttatagtctgat 4926131 Score = 414 bits (209), Expect = e-112 Identities = 278/301 (92%) Strand = Plus / Minus Query: 276 caactctaagatcaaaagggcaagagccacaaattggcctacagtgatgtcaaagtttgt 335 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 4927243 caactctaagatcaaaagggcaagagccacgaattggcctacagtcatgtcaaagtttgt 4927184 Query: 336 gcttgattggtatcttgagaagaagaaggggatgccgcctaagaccaagttcaagaagat 395 |||||||||||| ||| |||||||||||| |||||| || |||||||||||||||||||| Sbjct: 4927183 gcttgattggtaccttcagaagaagaaggagatgccacccaagaccaagttcaagaagat 4927124 Query: 396 gcaccaccattgttgcacatctgcactaaatgctagatttgagacaactttcactgttga 455 ||||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 4927123 gcaccaccattattgcacgaccgtactaaatgctagatttgagacaactttcactgttga 4927064 Query: 456 tcaggtccatcgccactttaagcgcttcaaggaggtttggaatatagtggcccgttatat 515 ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 4927063 tcaggtccaccgccactttaggcgcttcaaggaggtttggaatattgtggcccgttatat 4927004 Query: 516 gaatgagagtgggagcaggttcgacaagaaacataagatgcttatactaccttcttcaac 575 |||| ||||||||| ||||| ||||||||||| || ||||| ||||||||| ||||||| Sbjct: 4927003 gaatatgagtgggagtaggtttgacaagaaacacaaaatgctaatactacctccttcaac 4926944 Query: 576 t 576 | Sbjct: 4926943 t 4926943