BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf047m15 (1047 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052964.1| Oryza sativa (japonica cultivar-group) Os02g... 611 e-171 gb|AY107108.1| Zea mays PCO062113 mRNA sequence 341 3e-90 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 ref|NM_001050821.1| Oryza sativa (japonica cultivar-group) Os01g... 133 2e-27 >ref|NM_001052964.1| Oryza sativa (japonica cultivar-group) Os02g0247100 (Os02g0247100) mRNA, complete cds Length = 810 Score = 611 bits (308), Expect = e-171 Identities = 537/615 (87%), Gaps = 15/615 (2%) Strand = Plus / Plus Query: 259 cggcggggacgagttcgaccggctcgacgacgagcagctcatgtccatgttctccgacgt 318 |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 195 cggcggcggcgagttcgaccggctcgacgacgaacagctcatgtccatgttctccgacgt 254 Query: 319 cgaggcgcccgccgtgtccgacggtgggggcgagagggcg------ggggaggcgcagct 372 ||||||||| || ||||||||||| || |||||||||| | ||||||||||| || Sbjct: 255 cgaggcgccggcggtgtccgacggcggcggcgagagggggccggccggggaggcgcacct 314 Query: 373 cctggacatgggagaggcggaggagggaatggtggcgacgtcgccggccggcccgcgcgc 432 | |||||||||| || | ||| || || |||| |||||| |||||||||||| | |||| Sbjct: 315 catggacatgggtgacggggacgacgggatgggggcgacctcgccggccggcgctggcgc 374 Query: 433 aatggcggcgccagcggccg---------cggacggcgttgctgaccccaagagggttaa 483 |||||||||| | ||||||| |||||||| |||| ||||||||||| || || Sbjct: 375 aatggcggcggcggcggccgccgccgccgcggacggcattgccgaccccaagagagtcaa 434 Query: 484 aaggatactggcaaacaggcagtcagcgcagaggtcaagagttaggaagttgcagtatat 543 ||||| |||||||||||||||| |||||| ||||||| || || ||||||||||| || Sbjct: 435 gaggattttggcaaacaggcagtcggcgcagcggtcaagggtgagaaagttgcagtacat 494 Query: 544 ctctgagcttgagcgcagtgttaccactctccagatggaggtgtcggcactgtcccctcg 603 |||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 495 ctctgagcttgagcgcagcgtcaccactctccagatggaggtgtcagcactgtcacctcg 554 Query: 604 cgtggccttcctggatcaccagcggtcactgctcaccgtcggcaacagccatctcaagca 663 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 555 tgtggccttccttgatcatcagcggtcgctgctcaccgtcggcaacagccatctcaagca 614 Query: 664 aagaattgccgccctcgcacaagacaagatcttcaaagatgctcatcaagaggcactgaa 723 |||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 615 aagaatcgccgccctcgcacaagacaagatcttcaaagatgctcaccaggaggctctgaa 674 Query: 724 gaaggagattgagcggctacgccagctgtaccaccaccagcagatcaaggccaccggcgg 783 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 675 gaaggagattgagcggctacgccaagtgtaccaccagcagcagatcaaggccaccggagg 734 Query: 784 cgccgacatcgccgcagccgcctagatgcaggcaaagcaagagcttctcgcgtgcgaggg 843 ||||||||||||| | || |||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 735 cgccgacatcgccacggcggcctcaatgcaggccaagcatgagctgctggcgtgcgaggg 794 Query: 844 agctgcaatgcgata 858 ||| || |||||||| Sbjct: 795 agcggcgatgcgata 809 >gb|AY107108.1| Zea mays PCO062113 mRNA sequence Length = 730 Score = 341 bits (172), Expect = 3e-90 Identities = 359/422 (85%), Gaps = 12/422 (2%) Strand = Plus / Plus Query: 449 gccgcggacggcgttgctgaccccaagagggttaaaaggatactggcaaacaggcagtca 508 |||||||||||||| ||||| ||||| ||||| || |||||| |||||||||||||||| Sbjct: 143 gccgcggacggcgtcgctgagcccaaaagggtcaagaggatattggcaaacaggcagtcg 202 Query: 509 gcgcagaggtcaagagttaggaagttgcagtatatctctgagcttgagcgcagtgttacc 568 || ||||||||| |||| |||||| ||||||| ||||| |||||||| || || || ||| Sbjct: 203 gctcagaggtcacgagtgaggaagctgcagtacatctcggagcttgaacggagcgtcacc 262 Query: 569 actctccagatggaggtgtcggcactgtcccctcgcgtggccttcctggatcaccagcgg 628 | |||||||||||||||||| || ||||||||||||||||||||||| || ||||| || Sbjct: 263 agtctccagatggaggtgtcagcgctgtcccctcgcgtggccttcctcgaccaccaccgt 322 Query: 629 tcactgctcaccgtcggcaacagccatctcaagcaaagaattgccgccctcgcacaagac 688 ||||| ||||||||||||||||||||||||||||||||||| || || ||||| || ||| Sbjct: 323 tcacttctcaccgtcggcaacagccatctcaagcaaagaatcgcggcgctcgcccaggac 382 Query: 689 aagatcttcaaagatgctcatcaagaggcactgaagaaggagattgagcggctacgccag 748 |||||||||||||| ||||| |||||||| ||| |||||||||| ||||||| ||||| Sbjct: 383 aagatcttcaaagacgctcaccaagaggcgctggagaaggagatccagcggctgcgccaa 442 Query: 749 ctgtaccaccaccagcagatcaagg------ccaccggcggcgccgacatcgccgcagcc 802 ||||||| || |||||| |||||| ||||||||||||||||||||||| | ||| Sbjct: 443 gtgtaccagcagcagcaggtcaaggtggccaccaccggcggcgccgacatcgccaccgcc 502 Query: 803 gcc------tagatgcaggcaaagcaagagcttctcgcgtgcgagggagctgcaatgcga 856 ||| | ||||||||| | ||||||||| |||||||||||||| ||||| || ||| Sbjct: 503 gcctcgccgtcgatgcaggccaggcaagagctgctcgcgtgcgagggcgctgctattcga 562 Query: 857 ta 858 || Sbjct: 563 ta 564 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 202 bits (102), Expect = 2e-48 Identities = 123/130 (94%) Strand = Plus / Plus Query: 575 cagatggaggtgtcggcactgtcccctcgcgtggccttcctggatcaccagcggtcactg 634 |||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||| Sbjct: 8324152 cagatggaggtgtcagcactgtcacctcgtgtggccttccttgatcatcagcggtcgctg 8324211 Query: 635 ctcaccgtcggcaacagccatctcaagcaaagaattgccgccctcgcacaagacaagatc 694 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 8324212 ctcaccgtcggcaacagccatctcaagcaaagaatcgccgccctcgcacaagacaagatc 8324271 Query: 695 ttcaaagatg 704 |||||||||| Sbjct: 8324272 ttcaaagatg 8324281 Score = 170 bits (86), Expect = 7e-39 Identities = 172/201 (85%), Gaps = 6/201 (2%) Strand = Plus / Plus Query: 259 cggcggggacgagttcgaccggctcgacgacgagcagctcatgtccatgttctccgacgt 318 |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 8323281 cggcggcggcgagttcgaccggctcgacgacgaacagctcatgtccatgttctccgacgt 8323340 Query: 319 cgaggcgcccgccgtgtccgacggtgggggcgagag------ggcgggggaggcgcagct 372 ||||||||| || ||||||||||| || |||||||| ||| ||||||||||| || Sbjct: 8323341 cgaggcgccggcggtgtccgacggcggcggcgagagggggccggccggggaggcgcacct 8323400 Query: 373 cctggacatgggagaggcggaggagggaatggtggcgacgtcgccggccggcccgcgcgc 432 | |||||||||| || | ||| || || |||| |||||| |||||||||||| | |||| Sbjct: 8323401 catggacatgggtgacggggacgacgggatgggggcgacctcgccggccggcgctggcgc 8323460 Query: 433 aatggcggcgccagcggccgc 453 |||||||||| | |||||||| Sbjct: 8323461 aatggcggcggcggcggccgc 8323481 Score = 165 bits (83), Expect = 4e-37 Identities = 137/155 (88%) Strand = Plus / Plus Query: 704 gctcatcaagaggcactgaagaaggagattgagcggctacgccagctgtaccaccaccag 763 ||||| || ||||| ||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 8324468 gctcaccaggaggctctgaagaaggagattgagcggctacgccaagtgtaccaccagcag 8324527 Query: 764 cagatcaaggccaccggcggcgccgacatcgccgcagccgcctagatgcaggcaaagcaa 823 ||||||||||||||||| ||||||||||||||| | || |||| |||||||| ||||| Sbjct: 8324528 cagatcaaggccaccggaggcgccgacatcgccacggcggcctcaatgcaggccaagcat 8324587 Query: 824 gagcttctcgcgtgcgagggagctgcaatgcgata 858 ||||| || |||||||||||||| || |||||||| Sbjct: 8324588 gagctgctggcgtgcgagggagcggcgatgcgata 8324622 Score = 107 bits (54), Expect = 9e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 492 tggcaaacaggcagtcagcgcagaggtcaagagttaggaagttgcagtatatctctgagc 551 |||||||||||||||| |||||| ||||||| || || ||||||||||| |||||||||| Sbjct: 8323934 tggcaaacaggcagtcggcgcagcggtcaagggtgagaaagttgcagtacatctctgagc 8323993 Query: 552 ttgagcgcagtgttaccactctccag 577 |||||||||| || |||||||||||| Sbjct: 8323994 ttgagcgcagcgtcaccactctccag 8324019 >dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 202 bits (102), Expect = 2e-48 Identities = 123/130 (94%) Strand = Plus / Plus Query: 575 cagatggaggtgtcggcactgtcccctcgcgtggccttcctggatcaccagcggtcactg 634 |||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||| Sbjct: 100823 cagatggaggtgtcagcactgtcacctcgtgtggccttccttgatcatcagcggtcgctg 100882 Query: 635 ctcaccgtcggcaacagccatctcaagcaaagaattgccgccctcgcacaagacaagatc 694 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 100883 ctcaccgtcggcaacagccatctcaagcaaagaatcgccgccctcgcacaagacaagatc 100942 Query: 695 ttcaaagatg 704 |||||||||| Sbjct: 100943 ttcaaagatg 100952 Score = 170 bits (86), Expect = 7e-39 Identities = 172/201 (85%), Gaps = 6/201 (2%) Strand = Plus / Plus Query: 259 cggcggggacgagttcgaccggctcgacgacgagcagctcatgtccatgttctccgacgt 318 |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99952 cggcggcggcgagttcgaccggctcgacgacgaacagctcatgtccatgttctccgacgt 100011 Query: 319 cgaggcgcccgccgtgtccgacggtgggggcgagag------ggcgggggaggcgcagct 372 ||||||||| || ||||||||||| || |||||||| ||| ||||||||||| || Sbjct: 100012 cgaggcgccggcggtgtccgacggcggcggcgagagggggccggccggggaggcgcacct 100071 Query: 373 cctggacatgggagaggcggaggagggaatggtggcgacgtcgccggccggcccgcgcgc 432 | |||||||||| || | ||| || || |||| |||||| |||||||||||| | |||| Sbjct: 100072 catggacatgggtgacggggacgacgggatgggggcgacctcgccggccggcgctggcgc 100131 Query: 433 aatggcggcgccagcggccgc 453 |||||||||| | |||||||| Sbjct: 100132 aatggcggcggcggcggccgc 100152 Score = 165 bits (83), Expect = 4e-37 Identities = 137/155 (88%) Strand = Plus / Plus Query: 704 gctcatcaagaggcactgaagaaggagattgagcggctacgccagctgtaccaccaccag 763 ||||| || ||||| ||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 101139 gctcaccaggaggctctgaagaaggagattgagcggctacgccaagtgtaccaccagcag 101198 Query: 764 cagatcaaggccaccggcggcgccgacatcgccgcagccgcctagatgcaggcaaagcaa 823 ||||||||||||||||| ||||||||||||||| | || |||| |||||||| ||||| Sbjct: 101199 cagatcaaggccaccggaggcgccgacatcgccacggcggcctcaatgcaggccaagcat 101258 Query: 824 gagcttctcgcgtgcgagggagctgcaatgcgata 858 ||||| || |||||||||||||| || |||||||| Sbjct: 101259 gagctgctggcgtgcgagggagcggcgatgcgata 101293 Score = 107 bits (54), Expect = 9e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 492 tggcaaacaggcagtcagcgcagaggtcaagagttaggaagttgcagtatatctctgagc 551 |||||||||||||||| |||||| ||||||| || || ||||||||||| |||||||||| Sbjct: 100605 tggcaaacaggcagtcggcgcagcggtcaagggtgagaaagttgcagtacatctctgagc 100664 Query: 552 ttgagcgcagtgttaccactctccag 577 |||||||||| || |||||||||||| Sbjct: 100665 ttgagcgcagcgtcaccactctccag 100690 >ref|NM_001050821.1| Oryza sativa (japonica cultivar-group) Os01g0756200 (Os01g0756200) mRNA, complete cds Length = 1111 Score = 133 bits (67), Expect = 2e-27 Identities = 223/275 (81%) Strand = Plus / Plus Query: 467 gaccccaagagggttaaaaggatactggcaaacaggcagtcagcgcagaggtcaagagtt 526 |||||||||||||| || ||||||||||| || ||||||| || |||||||| |||| Sbjct: 492 gaccccaagagggtcaagaggatactggctaatcggcagtcggcccagaggtcgcgagtg 551 Query: 527 aggaagttgcagtatatctctgagcttgagcgcagtgttaccactctccagatggaggtg 586 |||||| | ||||| ||||| ||||| |||||||| || || || || |||| ||||| Sbjct: 552 aggaagcttcagtacatctccgagctcgagcgcagcgtcacaaccctgcagaacgaggta 611 Query: 587 tcggcactgtcccctcgcgtggccttcctggatcaccagcggtcactgctcaccgtcggc 646 || | ||||||||||| ||||| || |||||||| |||||| | | || ||||||||| Sbjct: 612 tccgtgctgtcccctcgggtggcgtttctggatcagcagcggacgatcctgaccgtcggc 671 Query: 647 aacagccatctcaagcaaagaattgccgccctcgcacaagacaagatcttcaaagatgct 706 |||||||| |||||||| | || || || || ||||| |||||||| ||||| |||||| Sbjct: 672 aacagccacctcaagcagcggatcgcggctctagcacaggacaagattttcaaggatgct 731 Query: 707 catcaagaggcactgaagaaggagattgagcggct 741 ||||| ||||| ||| ||||||||| ||| |||| Sbjct: 732 catcaggaggcgttgaggaaggagatcgagaggct 766