BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf047f24 (923 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001069915.1| Oryza sativa (japonica cultivar-group) Os09g... 375 e-100 dbj|AK110733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-100 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 >ref|NM_001069915.1| Oryza sativa (japonica cultivar-group) Os09g0459200 (Os09g0459200) mRNA, complete cds Length = 1139 Score = 375 bits (189), Expect = e-100 Identities = 380/440 (86%), Gaps = 14/440 (3%) Strand = Plus / Plus Query: 167 gtcgctcatggctccgcggatatccttctccagcgacttcgcgctggagccgccgccttc 226 |||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 176 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 235 Query: 227 ggccgcagc-gcccctgtcggcgcgcgcgccgggggacgcggaattcgagttctccgtcg 285 ||| ||||| || | | ||| ||| ||||| |||||||| || |||||||||||||||| Sbjct: 236 ggc-gcagcagcagccggcggtgcgggcgcctggggacgccgacttcgagttctccgtcg 294 Query: 286 gcagccacccgatgatggctgccgaccagctcttctccaagggccgcgtcctgccgctcc 345 ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 295 gcagccacccgatgatggccgccgaccagctgatctccaagggccgcctcctgccgctcc 354 Query: 346 gggaggccccgcacggcca---cggcgccggcgccggcggccggcccccgacgctgcgcg 402 ||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||| Sbjct: 355 gggaggccccgcacggccacggcggcgccgacgccggcggccggccactcacgctccgcg 414 Query: 403 acgagctgcgtgcggacgaccgccacgggcgcgcgccccgtgcgcccaacgtccgatgga 462 |||||||||| ||||| |||||| || |||| ||||| ||||||||| | || |||| Sbjct: 415 acgagctgcgcacggacagccgccatggccgcgtcccccgcgcgcccaacattcggtgga 474 Query: 463 aggagttgcttggcctcaagaaggcgcccaagaag---cccgccgccgacgctggcgccg 519 ||||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 475 aggagttcctcggcctcaagaaggcgcccaagaaggcccccaccgccgacgctgccgccg 534 Query: 520 gc------acgtcgtcggccgacgcccatatggatcttggaggtcaaggaggcacgagag 573 || |||||||||||||| |||| |||||||||||||||||||| ||||||||| Sbjct: 535 gcgccacatcgtcgtcggccgacacccagatggatcttggaggtcaagggagcacgagag 594 Query: 574 actgaagcaacaaacgcaat 593 |||||||||||||||||||| Sbjct: 595 actgaagcaacaaacgcaat 614 Score = 95.6 bits (48), Expect = 3e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 758 catttccttttacctctttgttgcct-ttttttgggtgtaaaagggaattttgatcttta 816 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 794 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 853 Query: 817 gtttttgg 824 |||||||| Sbjct: 854 gtttttgg 861 >dbj|AK110733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E12, full insert sequence Length = 1139 Score = 375 bits (189), Expect = e-100 Identities = 380/440 (86%), Gaps = 14/440 (3%) Strand = Plus / Plus Query: 167 gtcgctcatggctccgcggatatccttctccagcgacttcgcgctggagccgccgccttc 226 |||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 176 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 235 Query: 227 ggccgcagc-gcccctgtcggcgcgcgcgccgggggacgcggaattcgagttctccgtcg 285 ||| ||||| || | | ||| ||| ||||| |||||||| || |||||||||||||||| Sbjct: 236 ggc-gcagcagcagccggcggtgcgggcgcctggggacgccgacttcgagttctccgtcg 294 Query: 286 gcagccacccgatgatggctgccgaccagctcttctccaagggccgcgtcctgccgctcc 345 ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 295 gcagccacccgatgatggccgccgaccagctgatctccaagggccgcctcctgccgctcc 354 Query: 346 gggaggccccgcacggcca---cggcgccggcgccggcggccggcccccgacgctgcgcg 402 ||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||| Sbjct: 355 gggaggccccgcacggccacggcggcgccgacgccggcggccggccactcacgctccgcg 414 Query: 403 acgagctgcgtgcggacgaccgccacgggcgcgcgccccgtgcgcccaacgtccgatgga 462 |||||||||| ||||| |||||| || |||| ||||| ||||||||| | || |||| Sbjct: 415 acgagctgcgcacggacagccgccatggccgcgtcccccgcgcgcccaacattcggtgga 474 Query: 463 aggagttgcttggcctcaagaaggcgcccaagaag---cccgccgccgacgctggcgccg 519 ||||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 475 aggagttcctcggcctcaagaaggcgcccaagaaggcccccaccgccgacgctgccgccg 534 Query: 520 gc------acgtcgtcggccgacgcccatatggatcttggaggtcaaggaggcacgagag 573 || |||||||||||||| |||| |||||||||||||||||||| ||||||||| Sbjct: 535 gcgccacatcgtcgtcggccgacacccagatggatcttggaggtcaagggagcacgagag 594 Query: 574 actgaagcaacaaacgcaat 593 |||||||||||||||||||| Sbjct: 595 actgaagcaacaaacgcaat 614 Score = 95.6 bits (48), Expect = 3e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 758 catttccttttacctctttgttgcct-ttttttgggtgtaaaagggaattttgatcttta 816 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 794 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 853 Query: 817 gtttttgg 824 |||||||| Sbjct: 854 gtttttgg 861 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 305 bits (154), Expect = 2e-79 Identities = 313/362 (86%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 167 gtcgctcatggctccgcggatatccttctccagcgacttcgcgctggagccgccgccttc 226 |||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 17296464 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 17296523 Query: 227 ggccgcagc-gcccctgtcggcgcgcgcgccgggggacgcggaattcgagttctccgtcg 285 ||| ||||| || | | ||| ||| ||||| |||||||| || |||||||||||||||| Sbjct: 17296524 ggc-gcagcagcagccggcggtgcgggcgcctggggacgccgacttcgagttctccgtcg 17296582 Query: 286 gcagccacccgatgatggctgccgaccagctcttctccaagggccgcgtcctgccgctcc 345 ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 17296583 gcagccacccgatgatggccgccgaccagctgatctccaagggccgcctcctgccgctcc 17296642 Query: 346 gggaggccccgcacggcca---cggcgccggcgccggcggccggcccccgacgctgcgcg 402 ||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||| Sbjct: 17296643 gggaggccccgcacggccacggcggcgccgacgccggcggccggccactcacgctccgcg 17296702 Query: 403 acgagctgcgtgcggacgaccgccacgggcgcgcgccccgtgcgcccaacgtccgatgga 462 |||||||||| ||||| |||||| || |||| ||||| ||||||||| | || |||| Sbjct: 17296703 acgagctgcgcacggacagccgccatggccgcgtcccccgcgcgcccaacattcggtgga 17296762 Query: 463 aggagttgcttggcctcaagaaggcgcccaagaag---cccgccgccgacgctggcgccg 519 ||||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 17296763 aggagttcctcggcctcaagaaggcgcccaagaaggcccccaccgccgacgctgccgccg 17296822 Query: 520 gc 521 || Sbjct: 17296823 gc 17296824 Score = 95.6 bits (48), Expect = 3e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 758 catttccttttacctctttgttgcct-ttttttgggtgtaaaagggaattttgatcttta 816 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 17297417 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 17297476 Query: 817 gtttttgg 824 |||||||| Sbjct: 17297477 gtttttgg 17297484 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 545 ggatcttggaggtcaaggaggcacgagagactgaagcaacaaacgcaat 593 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 17297189 ggatcttggaggtcaagggagcacgagagactgaagcaacaaacgcaat 17297237 >dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 305 bits (154), Expect = 2e-79 Identities = 313/362 (86%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 167 gtcgctcatggctccgcggatatccttctccagcgacttcgcgctggagccgccgccttc 226 |||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 83336 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 83395 Query: 227 ggccgcagc-gcccctgtcggcgcgcgcgccgggggacgcggaattcgagttctccgtcg 285 ||| ||||| || | | ||| ||| ||||| |||||||| || |||||||||||||||| Sbjct: 83396 ggc-gcagcagcagccggcggtgcgggcgcctggggacgccgacttcgagttctccgtcg 83454 Query: 286 gcagccacccgatgatggctgccgaccagctcttctccaagggccgcgtcctgccgctcc 345 ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 83455 gcagccacccgatgatggccgccgaccagctgatctccaagggccgcctcctgccgctcc 83514 Query: 346 gggaggccccgcacggcca---cggcgccggcgccggcggccggcccccgacgctgcgcg 402 ||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||| Sbjct: 83515 gggaggccccgcacggccacggcggcgccgacgccggcggccggccactcacgctccgcg 83574 Query: 403 acgagctgcgtgcggacgaccgccacgggcgcgcgccccgtgcgcccaacgtccgatgga 462 |||||||||| ||||| |||||| || |||| ||||| ||||||||| | || |||| Sbjct: 83575 acgagctgcgcacggacagccgccatggccgcgtcccccgcgcgcccaacattcggtgga 83634 Query: 463 aggagttgcttggcctcaagaaggcgcccaagaag---cccgccgccgacgctggcgccg 519 ||||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 83635 aggagttcctcggcctcaagaaggcgcccaagaaggcccccaccgccgacgctgccgccg 83694 Query: 520 gc 521 || Sbjct: 83695 gc 83696 Score = 95.6 bits (48), Expect = 3e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 758 catttccttttacctctttgttgcct-ttttttgggtgtaaaagggaattttgatcttta 816 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 84289 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 84348 Query: 817 gtttttgg 824 |||||||| Sbjct: 84349 gtttttgg 84356 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 545 ggatcttggaggtcaaggaggcacgagagactgaagcaacaaacgcaat 593 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 84061 ggatcttggaggtcaagggagcacgagagactgaagcaacaaacgcaat 84109 >dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 305 bits (154), Expect = 2e-79 Identities = 313/362 (86%), Gaps = 8/362 (2%) Strand = Plus / Plus Query: 167 gtcgctcatggctccgcggatatccttctccagcgacttcgcgctggagccgccgccttc 226 |||| ||||||| ||| |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 20377 gtcgttcatggcgccgaggatatccttttccagcgacttcgcgctcgagccgccgccgcc 20436 Query: 227 ggccgcagc-gcccctgtcggcgcgcgcgccgggggacgcggaattcgagttctccgtcg 285 ||| ||||| || | | ||| ||| ||||| |||||||| || |||||||||||||||| Sbjct: 20437 ggc-gcagcagcagccggcggtgcgggcgcctggggacgccgacttcgagttctccgtcg 20495 Query: 286 gcagccacccgatgatggctgccgaccagctcttctccaagggccgcgtcctgccgctcc 345 ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 20496 gcagccacccgatgatggccgccgaccagctgatctccaagggccgcctcctgccgctcc 20555 Query: 346 gggaggccccgcacggcca---cggcgccggcgccggcggccggcccccgacgctgcgcg 402 ||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||| Sbjct: 20556 gggaggccccgcacggccacggcggcgccgacgccggcggccggccactcacgctccgcg 20615 Query: 403 acgagctgcgtgcggacgaccgccacgggcgcgcgccccgtgcgcccaacgtccgatgga 462 |||||||||| ||||| |||||| || |||| ||||| ||||||||| | || |||| Sbjct: 20616 acgagctgcgcacggacagccgccatggccgcgtcccccgcgcgcccaacattcggtgga 20675 Query: 463 aggagttgcttggcctcaagaaggcgcccaagaag---cccgccgccgacgctggcgccg 519 ||||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 20676 aggagttcctcggcctcaagaaggcgcccaagaaggcccccaccgccgacgctgccgccg 20735 Query: 520 gc 521 || Sbjct: 20736 gc 20737 Score = 95.6 bits (48), Expect = 3e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 758 catttccttttacctctttgttgcct-ttttttgggtgtaaaagggaattttgatcttta 816 |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || Sbjct: 21330 catttccttttacctctttgctgcatcttttttgggtgtaaaagggaattttgatctcta 21389 Query: 817 gtttttgg 824 |||||||| Sbjct: 21390 gtttttgg 21397 Score = 81.8 bits (41), Expect = 5e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 545 ggatcttggaggtcaaggaggcacgagagactgaagcaacaaacgcaat 593 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 21102 ggatcttggaggtcaagggagcacgagagactgaagcaacaaacgcaat 21150