BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf047b02 (1363 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY107283.1| Zea mays PCO076711 mRNA sequence 1021 0.0 dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated m... 392 e-105 emb|Z36546.1| P.ciliare (Higgins) apospory associated mRNA, 876bp 392 e-105 gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associ... 392 e-105 gb|AY106235.1| Zea mays PCO066039 mRNA sequence 381 e-102 >gb|AY107283.1| Zea mays PCO076711 mRNA sequence Length = 1604 Score = 1021 bits (515), Expect = 0.0 Identities = 812/911 (89%) Strand = Plus / Plus Query: 186 gcaggcttgtcgaatccttttgatttcgcttctatgcaaagtttgctcaatgatccatct 245 |||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 376 gcaggcttttcaaatccttttgattttggttctatgcaaagtttgctcaatgatccatct 435 Query: 246 ataaaggagatggcagatcaaattgcaagggaccctgcattcaaccagatggctgagcag 305 || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 436 attaaggagatggcagatcaaattgcaagggatcctgcattcaaccggatggctgagcag 495 Query: 306 ctgcagaaaggtgctcagagtgcaggagaacagggcacgcctccattggaccctcagcaa 365 || |||| | ||||||| || |||||||||||||||| |||||||| | ||||| ||| Sbjct: 496 ctacagagaagtgctcaaagcacaggagaacagggcacacctccattaaatcctcaacaa 555 Query: 366 tatattgaaacgatgcaaaaggtcatggaaaacccccagtttatgacaatggcagagcgt 425 || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 556 tacatggaaacaatgcaaaaggtcatggaaaacccccagtttatgaccatggcagagcgt 615 Query: 426 cttgggaatgctcttatgcaggatcctgctatgtccagtatgctggaaaacttgactagt 485 || |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| Sbjct: 616 ctggggaatgctcttatgcaggatcctgctatgtccagtatgctggaaacctttagtagt 675 Query: 486 ccatcacataaggaacagcttgaagaacgcatgtctcgcattaaggaagatccagcctta 545 |||||||||||||| ||||| ||||| || |||||||||||||||||||||||||| | Sbjct: 676 ccatcacataaggagcagctggaagagcgtatgtctcgcattaaggaagatccagctatg 735 Query: 546 aagccaattcttgatgagttagagaatggtggtcctgctgcaatgataaagtactggaat 605 ||| ||||||||||||||||||||||||| || ||| |||||||||| ||||||||||| Sbjct: 736 aagtcaattcttgatgagttagagaatgggggcccttctgcaatgatgaagtactggaac 795 Query: 606 gaccctgaaactcttcaaaagattggccaggcaatgggaactaccatcccatttggcact 665 |||||||| ||||||||||||||||| ||||||||||| ||| | |||||||||| | Sbjct: 796 gaccctgatactcttcaaaagattggtgaggcaatgggagctagcttcccatttggtgca 855 Query: 666 gcttcttctgctgaaccttctggtactgaagaaactgaggaggaaggtggatacgaagat 725 | ||||||||||||||||||||||||||||||||||||||| |||||||| | || ||| Sbjct: 856 ggttcttctgctgaaccttctggtactgaagaaactgaggaagaaggtggggatgacgat 915 Query: 726 gaatccattgtccatcacactgccagtgttggtgatgacgagggtctgaagaaggctcta 785 |||||||| || |||||||||||||||||||||||||| |||||||| ||||| || ||| Sbjct: 916 gaatccatcgttcatcacactgccagtgttggtgatgaagagggtctcaagaaagcacta 975 Query: 786 gatggtggagcagacaaggatgaagaagactcggagggaagaagagccttacattttgca 845 ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 976 gatggtggagccgacaaggatgaagaagactctgagggaagaagggccttacattttgca 1035 Query: 846 tgtggatatggagagttgaagtgtgcacaaatccttcttgaggcgggtgctgcagtggac 905 ||||| || || |||||||||||||| || ||||||||||| || ||||||||||||||| Sbjct: 1036 tgtgggtacggtgagttgaagtgtgcccagatccttcttgaagctggtgctgcagtggac 1095 Query: 906 gcgttggataagaacaagaacactccgctgcattacgctgctggatatggtcggaaggag 965 || | || |||||||||||||| ||| |||||||||||||||| || || || |||||| Sbjct: 1096 gctcttgacaagaacaagaacaccccgttgcattacgctgctggctacggccgcaaggag 1155 Query: 966 tgcgtggatctgctgctgaagcacggcgctgctgtcactctccaaaacatggatgggaag 1025 || |||||||| || |||||||||| |||||||| || ||||||||| |||| |||||| Sbjct: 1156 tgtgtggatcttcttttgaagcacggtgctgctgtaacgctccaaaacctggacgggaag 1215 Query: 1026 acacccatcgacgttgctaagctcaacaaccaggatgaggttctcaagttactcgagaag 1085 ||||| ||||| || || ||||| || |||||||| |||||||| ||||| ||||||||| Sbjct: 1216 acacctatcgatgtcgccaagctgaataaccaggacgaggttctgaagttgctcgagaag 1275 Query: 1086 gacgcgttcct 1096 ||||| ||||| Sbjct: 1276 gacgccttcct 1286 >dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a Length = 876 Score = 392 bits (198), Expect = e-105 Identities = 354/406 (87%) Strand = Plus / Plus Query: 691 ctgaagaaactgaggaggaaggtggatacgaagatgaatccattgtccatcacactgcca 750 |||||||||||||||| ||||| || ||||| ||||| |||||||| ||||||||||||| Sbjct: 224 ctgaagaaactgaggaagaaggcgggtacgacgatgagtccattgttcatcacactgcca 283 Query: 751 gtgttggtgatgacgagggtctgaagaaggctctagatggtggagcagacaaggatgaag 810 |||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||| Sbjct: 284 gtgttggtgatgcagagggtctgaagaaagctttagatggtggggcagacaaagatgaag 343 Query: 811 aagactcggagggaagaagagccttacattttgcatgtggatatggagagttgaagtgtg 870 | || | ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 344 aggatgcagagggaagaagggccttgcattttgcatgtggctatggcgagttgaaatgtg 403 Query: 871 cacaaatccttcttgaggcgggtgctgcagtggacgcgttggataagaacaagaacactc 930 | |||||||||| ||||| ||||||||||| ||||| ||||||||||||| ||||||| Sbjct: 404 cggaaatccttctggaggctggtgctgcagttgacgctctggataagaacaaaaacactc 463 Query: 931 cgctgcattacgctgctggatatggtcggaaggagtgcgtggatctgctgctgaagcacg 990 |||||||||| |||||||| ||||| |||||||| || |||||||| ||| | ||||| | Sbjct: 464 cgctgcattatgctgctgggtatggccggaaggaatgtgtggatcttctgttaaagcatg 523 Query: 991 gcgctgctgtcactctccaaaacatggatgggaagacacccatcgacgttgctaagctca 1050 | ||||||||||| |||| || ||||||||||||| |||||||| ||||| | ||||| Sbjct: 524 gtgctgctgtcacggtccagaatctggatgggaagacccccatcgaagttgccaggctca 583 Query: 1051 acaaccaggatgaggttctcaagttactcgagaaggacgcgttcct 1096 |||| |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 584 acaatcaggatgaggttctcaagttgctggagaaggacgccttcct 629 Score = 168 bits (85), Expect = 4e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 492 cataaggaacagcttgaagaacgcatgtctcgcattaaggaagatccagccttaaagcca 551 |||||||| ||||||||||| || ||| |||| || |||||||||||| |||| |||||| Sbjct: 25 cataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatccttgaagcca 84 Query: 552 attcttgatgagttagagaatggtggtcctgctgcaatgataaagtactggaatgaccct 611 |||||||||||| |||||||||||||||| |||| ||| | |||||||||||||||||| Sbjct: 85 attcttgatgagatagagaatggtggtccgtctgctatggtgaagtactggaatgaccct 144 Query: 612 gaaactcttcaaaagattggccaggcaatggga 644 || |||||||||||||||||||||||||||| Sbjct: 145 gaggttcttcaaaagattggccaggcaatggga 177 >emb|Z36546.1| P.ciliare (Higgins) apospory associated mRNA, 876bp Length = 876 Score = 392 bits (198), Expect = e-105 Identities = 354/406 (87%) Strand = Plus / Plus Query: 691 ctgaagaaactgaggaggaaggtggatacgaagatgaatccattgtccatcacactgcca 750 |||||||||||||||| ||||| || ||||| ||||| |||||||| ||||||||||||| Sbjct: 224 ctgaagaaactgaggaagaaggcgggtacgacgatgagtccattgttcatcacactgcca 283 Query: 751 gtgttggtgatgacgagggtctgaagaaggctctagatggtggagcagacaaggatgaag 810 |||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||| Sbjct: 284 gtgttggtgatgcagagggtctgaagaaagctttagatggtggggcagacaaagatgaag 343 Query: 811 aagactcggagggaagaagagccttacattttgcatgtggatatggagagttgaagtgtg 870 | || | ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 344 aggatgcagagggaagaagggccttgcattttgcatgtggctatggcgagttgaaatgtg 403 Query: 871 cacaaatccttcttgaggcgggtgctgcagtggacgcgttggataagaacaagaacactc 930 | |||||||||| ||||| ||||||||||| ||||| ||||||||||||| ||||||| Sbjct: 404 cggaaatccttctggaggctggtgctgcagttgacgctctggataagaacaaaaacactc 463 Query: 931 cgctgcattacgctgctggatatggtcggaaggagtgcgtggatctgctgctgaagcacg 990 |||||||||| |||||||| ||||| |||||||| || |||||||| ||| | ||||| | Sbjct: 464 cgctgcattatgctgctgggtatggccggaaggaatgtgtggatcttctgttaaagcatg 523 Query: 991 gcgctgctgtcactctccaaaacatggatgggaagacacccatcgacgttgctaagctca 1050 | ||||||||||| |||| || ||||||||||||| |||||||| ||||| | ||||| Sbjct: 524 gtgctgctgtcacggtccagaatctggatgggaagacccccatcgaagttgccaggctca 583 Query: 1051 acaaccaggatgaggttctcaagttactcgagaaggacgcgttcct 1096 |||| |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 584 acaatcaggatgaggttctcaagttgctggagaaggacgccttcct 629 Score = 168 bits (85), Expect = 4e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 492 cataaggaacagcttgaagaacgcatgtctcgcattaaggaagatccagccttaaagcca 551 |||||||| ||||||||||| || ||| |||| || |||||||||||| |||| |||||| Sbjct: 25 cataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatccttgaagcca 84 Query: 552 attcttgatgagttagagaatggtggtcctgctgcaatgataaagtactggaatgaccct 611 |||||||||||| |||||||||||||||| |||| ||| | |||||||||||||||||| Sbjct: 85 attcttgatgagatagagaatggtggtccgtctgctatggtgaagtactggaatgaccct 144 Query: 612 gaaactcttcaaaagattggccaggcaatggga 644 || |||||||||||||||||||||||||||| Sbjct: 145 gaggttcttcaaaagattggccaggcaatggga 177 >gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB 3-1a, partial cds Length = 876 Score = 392 bits (198), Expect = e-105 Identities = 354/406 (87%) Strand = Plus / Plus Query: 691 ctgaagaaactgaggaggaaggtggatacgaagatgaatccattgtccatcacactgcca 750 |||||||||||||||| ||||| || ||||| ||||| |||||||| ||||||||||||| Sbjct: 224 ctgaagaaactgaggaagaaggcgggtacgacgatgagtccattgttcatcacactgcca 283 Query: 751 gtgttggtgatgacgagggtctgaagaaggctctagatggtggagcagacaaggatgaag 810 |||||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||| Sbjct: 284 gtgttggtgatgcagagggtctgaagaaagctttagatggtggggcagacaaagatgaag 343 Query: 811 aagactcggagggaagaagagccttacattttgcatgtggatatggagagttgaagtgtg 870 | || | ||||||||||| ||||| |||||||||||||| ||||| |||||||| |||| Sbjct: 344 aggatgcagagggaagaagggccttgcattttgcatgtggctatggcgagttgaaatgtg 403 Query: 871 cacaaatccttcttgaggcgggtgctgcagtggacgcgttggataagaacaagaacactc 930 | |||||||||| ||||| ||||||||||| ||||| ||||||||||||| ||||||| Sbjct: 404 cggaaatccttctggaggctggtgctgcagttgacgctctggataagaacaaaaacactc 463 Query: 931 cgctgcattacgctgctggatatggtcggaaggagtgcgtggatctgctgctgaagcacg 990 |||||||||| |||||||| ||||| |||||||| || |||||||| ||| | ||||| | Sbjct: 464 cgctgcattatgctgctgggtatggccggaaggaatgtgtggatcttctgttaaagcatg 523 Query: 991 gcgctgctgtcactctccaaaacatggatgggaagacacccatcgacgttgctaagctca 1050 | ||||||||||| |||| || ||||||||||||| |||||||| ||||| | ||||| Sbjct: 524 gtgctgctgtcacggtccagaatctggatgggaagacccccatcgaagttgccaggctca 583 Query: 1051 acaaccaggatgaggttctcaagttactcgagaaggacgcgttcct 1096 |||| |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 584 acaatcaggatgaggttctcaagttgctggagaaggacgccttcct 629 Score = 168 bits (85), Expect = 4e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 492 cataaggaacagcttgaagaacgcatgtctcgcattaaggaagatccagccttaaagcca 551 |||||||| ||||||||||| || ||| |||| || |||||||||||| |||| |||||| Sbjct: 25 cataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatccttgaagcca 84 Query: 552 attcttgatgagttagagaatggtggtcctgctgcaatgataaagtactggaatgaccct 611 |||||||||||| |||||||||||||||| |||| ||| | |||||||||||||||||| Sbjct: 85 attcttgatgagatagagaatggtggtccgtctgctatggtgaagtactggaatgaccct 144 Query: 612 gaaactcttcaaaagattggccaggcaatggga 644 || |||||||||||||||||||||||||||| Sbjct: 145 gaggttcttcaaaagattggccaggcaatggga 177 >gb|AY106235.1| Zea mays PCO066039 mRNA sequence Length = 1360 Score = 381 bits (192), Expect = e-102 Identities = 360/416 (86%) Strand = Plus / Plus Query: 228 ttgctcaatgatccatctataaaggagatggcagatcaaattgcaagggaccctgcattc 287 ||||||||||| ||||| |||| |||||||| || ||||||||||| ||||||| ||| Sbjct: 226 ttgctcaatgacccatcgataagagagatggctgagcaaattgcaagtgaccctgtgttc 285 Query: 288 aaccagatggctgagcagctgcagaaaggtgctcagagtgcaggagaacagggcacgcct 347 |||||||||||||| ||||| |||||| |||||||| |||| ||||||||||| | ||| Sbjct: 286 aaccagatggctgaacagcttcagaaaagtgctcagggtgctggagaacagggtattcct 345 Query: 348 ccattggaccctcagcaatatattgaaacgatgcaaaaggtcatggaaaacccccagttt 407 ||||||| ||||| || ||||| ||||| |||||| | |||||| ||||||| |||||| Sbjct: 346 gcattggatcctcaacagtatatggaaacaatgcaacaagtcatgcaaaaccctcagttt 405 Query: 408 atgacaatggcagagcgtcttgggaatgctcttatgcaggatcctgctatgtccagtatg 467 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 406 gtgtcaatggcagagcgtcttgggaatgcccttatgcaggatcctgctatgtccagtatg 465 Query: 468 ctggaaaacttgactagtccatcacataaggaacagcttgaagaacgcatgtctcgcatt 527 || || |||||||| |||||| | |||||||| |||||||| || | ||| | || || Sbjct: 466 cttgagaacttgaccagtccagctcataaggagcagcttgaggagaggatggcccgtatc 525 Query: 528 aaggaagatccagccttaaagccaattcttgatgagttagagaatggtggtcctgctgca 587 |||||||||||| |||| |||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 526 aaggaagatccatccttgaagccaattcttgatgagatagagaatgggggtccatctgca 585 Query: 588 atgataaagtactggaatgaccctgaaactcttcaaaagattggccaggcaatggg 643 ||| | ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 586 atggtgaagtattggaatgaccctgaggttcttcaaaagattggccaggcaatggg 641 Score = 337 bits (170), Expect = 7e-89 Identities = 347/406 (85%) Strand = Plus / Plus Query: 691 ctgaagaaactgaggaggaaggtggatacgaagatgaatccattgtccatcacactgcca 750 ||||||| |||||||||||||| || | || ||||| |||||||| ||||||||||| | Sbjct: 689 ctgaagagactgaggaggaaggaggggatgacgatgagtccattgttcatcacactgcaa 748 Query: 751 gtgttggtgatgacgagggtctgaagaaggctctagatggtggagcagacaaggatgaag 810 ||||||||||||| |||||| ||||||| ||| |||| |||||||||||||||||||||| Sbjct: 749 gtgttggtgatgaagagggtttgaagaaagctttagaaggtggagcagacaaggatgaag 808 Query: 811 aagactcggagggaagaagagccttacattttgcatgtggatatggagagttgaagtgtg 870 |||| | ||||||||| | || ||||||||||||||||| ||||| ||||||||||||| Sbjct: 809 aagatgccgagggaagacgggctttacattttgcatgtggctatggtgagttgaagtgtg 868 Query: 871 cacaaatccttcttgaggcgggtgctgcagtggacgcgttggataagaacaagaacactc 930 || |||| || ||||||||||| || ||||| || || | ||||||||||||||||||| Sbjct: 869 cagaaattctccttgaggcgggggccgcagttgatgccctagataagaacaagaacactc 928 Query: 931 cgctgcattacgctgctggatatggtcggaaggagtgcgtggatctgctgctgaagcacg 990 || |||| || |||||||| |||||||||||||| || |||||||| ||| ||||| | | Sbjct: 929 cgttgcactatgctgctgggtatggtcggaaggaatgtgtggatcttctgttgaagtatg 988 Query: 991 gcgctgctgtcactctccaaaacatggatgggaagacacccatcgacgttgctaagctca 1050 | ||||||||||| ||||| || |||| ||||| || |||||||| ||||| || |||| Sbjct: 989 gtgctgctgtcacgctccagaatctggacgggaaaacccccatcgaggttgccaaactca 1048 Query: 1051 acaaccaggatgaggttctcaagttactcgagaaggacgcgttcct 1096 ||| || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 1049 acagtcaagatgaggttctcaagttgctagagaaggacgctttcct 1094