BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf045o08 (2079 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY105609.1| Zea mays PCO130861 mRNA sequence 577 e-161 dbj|AK243690.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 276 3e-70 ref|NM_001057267.1| Oryza sativa (japonica cultivar-group) Os03g... 276 3e-70 gb|AY108753.1| Zea mays PCO090965 mRNA sequence 224 1e-54 gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 145 8e-31 >gb|AY105609.1| Zea mays PCO130861 mRNA sequence Length = 773 Score = 577 bits (291), Expect = e-161 Identities = 580/675 (85%), Gaps = 1/675 (0%) Strand = Plus / Plus Query: 1015 gcgcaggggacgtacggcacggtctatcgcggcacctatgatggccaggatgttgcagtt 1074 |||||||| || ||||||||||| ||||||||||| |||||||| ||||| || ||||| Sbjct: 9 gcgcagggcacctacggcacggtgtatcgcggcacgtatgatgggcaggacgtcgcagta 68 Query: 1075 aaactgttggattggggagaagatggtttttcaacagaatctgaaactgctgctctacga 1134 ||||| ||||||||||| |||||||| ||| | ||||| |||||||||| | || ||| Sbjct: 69 aaactattggattggggtgaagatggctttgcgtcagaaactgaaactgccacactgcga 128 Query: 1135 gcatcatttaagcaggaggttgctgtttggcatgagctcagccatccaaatgttactaag 1194 |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||| Sbjct: 129 gcatcatttaagcaggaggttgctgtctggcatgagctcaaccatccgaatgttacaaag 188 Query: 1195 tttgtcggtgcatcaatgggtaccacagaccttaagattccaaccgatagttctgagagc 1254 ||||| ||||||||||||||||| |||||||||||||||||| || |||||||| | || Sbjct: 189 tttgttggtgcatcaatgggtactacagaccttaagattccagccaatagttctaacagt 248 Query: 1255 ggtgcacgcactgagctgccacagagagcatgttgtgttgtggtcgaatatcttgctgga 1314 |||| |||||||||||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 249 ggtgggcgcactgagctgccgccaagagcatgttgtgttgtggtcgaatatctcgctgga 308 Query: 1315 ggaacactgaaacaatatctaataaagaacttccgaaggaaacttgcatacaaagttgtg 1374 ||| ||||||| || ||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 309 ggatcactgaagcagtatttaataaagaacaggcgaaggaagcttgcatacaaggttgtt 368 Query: 1375 gttcagtttgcattggatttggccagaggattgagctatctacattcgaaaaagatcgtg 1434 |||||| | ||| ||||| | ||||||||||||| |||||||||||| | |||||| || Sbjct: 369 gttcagatagcactggatcttgccagaggattgaactatctacattcaagaaagatagta 428 Query: 1435 catcgggatgtcaaaactgaaaatatgctacttactactgaacgaacccttaagattgct 1494 ||||||||||| ||||||||||||||||| || ||| | |||| ||||||||||||| Sbjct: 429 catcgggatgtaaaaactgaaaatatgctgctcgatacacagcgaaaccttaagattgct 488 Query: 1495 gatttgggtgtggctggtgttaaggctcagaatccaaaggaaatgccaggtgcgacaggc 1554 ||||| ||||| ||| ||||| ||||||||||||||||||| ||| |||| ||||| || Sbjct: 489 gattttggtgttgctcgtgttgaggctcagaatccaaaggacatgacaggcgcgactggg 548 Query: 1555 acactgggttacagggccccagaggtccttcaagccaacccatccaatagaaagtgtgat 1614 ||||| || |||| |||||||||||| ||| ||| ||| |||| ||| |||||||||||| Sbjct: 549 acacttggctacatggccccagaggtgcttgaaggcaagccatacaacagaaagtgtgat 608 Query: 1615 gtttccagtttgggcatatgcttat-gggaaatatcctgttgtgacatccggtatccggc 1673 || | |||||| ||||||||||||| ||||||||| ||| |||||||| | ||||| | Sbjct: 609 gtctacagttttggcatatgcttatggggaaatatactgctgtgacatgccatatccaga 668 Query: 1674 ccccagttttgcaga 1688 || |||||||||||| Sbjct: 669 cctcagttttgcaga 683 >dbj|AK243690.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100090O16, full insert sequence Length = 1848 Score = 276 bits (139), Expect = 3e-70 Identities = 241/275 (87%) Strand = Plus / Plus Query: 961 cccatggaggactgggagatcgacctctccaagctggagatccggcgtgtcaccgcgcag 1020 |||| |||||||||||||||||||||| | ||||| ||||||||| |||| || ||| Sbjct: 479 cccaaggaggactgggagatcgacctcgctaagctcgagatccggtacgtcattgctcag 538 Query: 1021 gggacgtacggcacggtctatcgcggcacctatgatggccaggatgttgcagttaaactg 1080 ||||| |||||||| || ||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 539 gggacctacggcaccgtgtatcgcggcacgtatgatggccaagatgttgcagtgaagctg 598 Query: 1081 ttggattggggagaagatggtttttcaacagaatctgaaactgctgctctacgagcatca 1140 |||||||||||||||||||||||| | |||||| |||||||||||||| | || ||||| Sbjct: 599 ttggattggggagaagatggttttgccacagaagctgaaactgctgctttgcggacatca 658 Query: 1141 tttaagcaggaggttgctgtttggcatgagctcagccatccaaatgttactaagtttgtc 1200 ||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 659 tttaagcaggaggttgcagtttggcataagctcagccatcctaatgttacaaagtttgtt 718 Query: 1201 ggtgcatcaatgggtaccacagaccttaagattcc 1235 || || |||||||| || ||||| ||||||||||| Sbjct: 719 ggagcctcaatggggactacagatcttaagattcc 753 Score = 260 bits (131), Expect = 2e-65 Identities = 320/383 (83%) Strand = Plus / Plus Query: 1279 agagcatgttgtgttgtggtcgaatatcttgctggaggaacactgaaacaatatctaata 1338 |||||||||||||||||||| |||||||| ||||||||||| |||| || ||||| ||| Sbjct: 797 agagcatgttgtgttgtggttgaatatctagctggaggaactttgaagcagtatctgata 856 Query: 1339 aagaacttccgaaggaaacttgcatacaaagttgtggttcagtttgcattggatttggcc 1398 |||||| ||| |||| ||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 857 aagaacagtcgacggaagcttgcatacaaagttgtagttcagcttgcattggatttggcc 916 Query: 1399 agaggattgagctatctacattcgaaaaagatcgtgcatcgggatgtcaaaactgaaaat 1458 ||||||||||||||||| || || | |||||| || ||||| ||||||||||||||||| Sbjct: 917 agaggattgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaac 976 Query: 1459 atgctacttactactgaacgaacccttaagattgctgatttgggtgtggctggtgttaag 1518 ||||| ||| ||| | ||| |||||| ||||||||||| ||||| ||| | || || Sbjct: 977 atgctccttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgag 1036 Query: 1519 gctcagaatccaaaggaaatgccaggtgcgacaggcacactgggttacagggccccagag 1578 ||||||||||||||||| ||| | |||||||||||||| || ||||| | |||||||||| Sbjct: 1037 gctcagaatccaaaggatatgactggtgcgacaggcactcttggttatatggccccagag 1096 Query: 1579 gtccttcaagccaacccatccaatagaaagtgtgatgtttccagtttgggcatatgctta 1638 || ||| | | || || | ||| || || |||||||||| ||||| || || |||||| Sbjct: 1097 gttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagttttggaatttgctta 1156 Query: 1639 tgggaaatatcctgttgtgacat 1661 |||||||| | ||||||||||| Sbjct: 1157 tgggaaatctattgttgtgacat 1179 >ref|NM_001057267.1| Oryza sativa (japonica cultivar-group) Os03g0638800 (Os03g0638800) mRNA, complete cds Length = 1212 Score = 276 bits (139), Expect = 3e-70 Identities = 241/275 (87%) Strand = Plus / Plus Query: 961 cccatggaggactgggagatcgacctctccaagctggagatccggcgtgtcaccgcgcag 1020 |||| |||||||||||||||||||||| | ||||| ||||||||| |||| || ||| Sbjct: 181 cccaaggaggactgggagatcgacctcgctaagctcgagatccggtacgtcattgctcag 240 Query: 1021 gggacgtacggcacggtctatcgcggcacctatgatggccaggatgttgcagttaaactg 1080 ||||| |||||||| || ||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 241 gggacctacggcaccgtgtatcgcggcacgtatgatggccaagatgttgcagtgaagctg 300 Query: 1081 ttggattggggagaagatggtttttcaacagaatctgaaactgctgctctacgagcatca 1140 |||||||||||||||||||||||| | |||||| |||||||||||||| | || ||||| Sbjct: 301 ttggattggggagaagatggttttgccacagaagctgaaactgctgctttgcggacatca 360 Query: 1141 tttaagcaggaggttgctgtttggcatgagctcagccatccaaatgttactaagtttgtc 1200 ||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 361 tttaagcaggaggttgcagtttggcataagctcagccatcctaatgttacaaagtttgtt 420 Query: 1201 ggtgcatcaatgggtaccacagaccttaagattcc 1235 || || |||||||| || ||||| ||||||||||| Sbjct: 421 ggagcctcaatggggactacagatcttaagattcc 455 Score = 260 bits (131), Expect = 2e-65 Identities = 320/383 (83%) Strand = Plus / Plus Query: 1279 agagcatgttgtgttgtggtcgaatatcttgctggaggaacactgaaacaatatctaata 1338 |||||||||||||||||||| |||||||| ||||||||||| |||| || ||||| ||| Sbjct: 499 agagcatgttgtgttgtggttgaatatctagctggaggaactttgaagcagtatctgata 558 Query: 1339 aagaacttccgaaggaaacttgcatacaaagttgtggttcagtttgcattggatttggcc 1398 |||||| ||| |||| ||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 559 aagaacagtcgacggaagcttgcatacaaagttgtagttcagcttgcattggatttggcc 618 Query: 1399 agaggattgagctatctacattcgaaaaagatcgtgcatcgggatgtcaaaactgaaaat 1458 ||||||||||||||||| || || | |||||| || ||||| ||||||||||||||||| Sbjct: 619 agaggattgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaac 678 Query: 1459 atgctacttactactgaacgaacccttaagattgctgatttgggtgtggctggtgttaag 1518 ||||| ||| ||| | ||| |||||| ||||||||||| ||||| ||| | || || Sbjct: 679 atgctccttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgag 738 Query: 1519 gctcagaatccaaaggaaatgccaggtgcgacaggcacactgggttacagggccccagag 1578 ||||||||||||||||| ||| | |||||||||||||| || ||||| | |||||||||| Sbjct: 739 gctcagaatccaaaggatatgactggtgcgacaggcactcttggttatatggccccagag 798 Query: 1579 gtccttcaagccaacccatccaatagaaagtgtgatgtttccagtttgggcatatgctta 1638 || ||| | | || || | ||| || || |||||||||| ||||| || || |||||| Sbjct: 799 gttcttgatggtaaaccgtacaacaggaaatgtgatgtttatagttttggaatttgctta 858 Query: 1639 tgggaaatatcctgttgtgacat 1661 |||||||| | ||||||||||| Sbjct: 859 tgggaaatctattgttgtgacat 881 >gb|AY108753.1| Zea mays PCO090965 mRNA sequence Length = 1019 Score = 224 bits (113), Expect = 1e-54 Identities = 207/239 (86%) Strand = Plus / Plus Query: 952 tcccaggggcccatggaggactgggagatcgacctctccaagctggagatccggcgtgtc 1011 ||||||||||| | |||||| |||||||||||||| | |||||||||||||| |||| Sbjct: 771 tcccaggggccaaaggaggagtgggagatcgaccttgcaaagctggagatccgctatgtc 830 Query: 1012 accgcgcaggggacgtacggcacggtctatcgcggcacctatgatggccaggatgttgca 1071 | ||| ||||||||||| ||||||||||| || |||||||| ||||| ||||| || ||| Sbjct: 831 atcgctcaggggacgtatggcacggtctaccggggcacctacgatggacaggacgtcgca 890 Query: 1072 gttaaactgttggattggggagaagatggtttttcaacagaatctgaaactgctgctcta 1131 || || || |||||||||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 891 gtgaagcttttggattggggagaagatggttttgccacagaagctgaaactgctgcttta 950 Query: 1132 cgagcatcatttaagcaggaggttgctgtttggcatgagctcagccatccaaatgttac 1190 ||| ||||||||||| ||||||| ||||||||||| |||||||||| || |||||||| Sbjct: 951 cgaacatcatttaagacggaggttnctgtttggcataagctcagccancctaatgttac 1009 >gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 145 bits (73), Expect = 8e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 1078 ctgttggattggggagaagatggtttttcaacagaatctgaaactgctgctctacgagca 1137 ||||||||||||||||||||||||||| | |||||| |||||||||||||| | || || Sbjct: 107548 ctgttggattggggagaagatggttttgccacagaagctgaaactgctgctttgcggaca 107489 Query: 1138 tcatttaagcaggaggttgctgtttggcatgagctcagccatccaaatgttac 1190 |||||||||||||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 107488 tcatttaagcaggaggttgcagtttggcataagctcagccatcctaatgttac 107436 Score = 137 bits (69), Expect = 2e-28 Identities = 111/125 (88%) Strand = Plus / Minus Query: 1279 agagcatgttgtgttgtggtcgaatatcttgctggaggaacactgaaacaatatctaata 1338 |||||||||||||||||||| |||||||| ||||||||||| |||| || ||||| ||| Sbjct: 106910 agagcatgttgtgttgtggttgaatatctagctggaggaactttgaagcagtatctgata 106851 Query: 1339 aagaacttccgaaggaaacttgcatacaaagttgtggttcagtttgcattggatttggcc 1398 |||||| ||| |||| ||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 106850 aagaacagtcgacggaagcttgcatacaaagttgtagttcagcttgcattggatttggcc 106791 Query: 1399 agagg 1403 ||||| Sbjct: 106790 agagg 106786 Score = 115 bits (58), Expect = 7e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 1403 gattgagctatctacattcgaaaaagatcgtgcatcgggatgtcaaaactgaaaatatgc 1462 ||||||||||||| || || | |||||| || ||||| ||||||||||||||||| |||| Sbjct: 106707 gattgagctatctccactctagaaagattgtacatcgtgatgtcaaaactgaaaacatgc 106648 Query: 1463 tacttactactgaacgaacccttaagattgctgatttgggtgtggctggtgttaaggctc 1522 | ||| ||| | ||| |||||| ||||||||||| ||||| ||| | || |||||| Sbjct: 106647 tccttgatacacagagaaaccttaaaattgctgattttggtgttgctcgggtcgaggctc 106588 Query: 1523 agaatccaaaggaaatgccaggtgcgacaggcacactgggttacagggccccagaggt 1580 ||||||||||||| ||| | |||||||||||||| || ||||| | |||||||||||| Sbjct: 106587 agaatccaaaggatatgactggtgcgacaggcactcttggttatatggccccagaggt 106530 Score = 103 bits (52), Expect = 3e-18 Identities = 97/112 (86%) Strand = Plus / Minus Query: 961 cccatggaggactgggagatcgacctctccaagctggagatccggcgtgtcaccgcgcag 1020 |||| |||||||||||||||||||||| | ||||| ||||||||| |||| || ||| Sbjct: 109666 cccaaggaggactgggagatcgacctcgctaagctcgagatccggtacgtcattgctcag 109607 Query: 1021 gggacgtacggcacggtctatcgcggcacctatgatggccaggatgttgcag 1072 ||||| |||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 109606 gggacctacggcaccgtgtatcgcggcacgtatgatggccaagatgttgcag 109555